RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 COL2A1P02458 1487 aaPredicted RBP16.09■□□□□ 0.17
ABCF3-212ENST00000478288 IPO8O15397 1037 aaKnown RBP16.08■□□□□ 0.16
ABCF3-212ENST00000478288 MAP4K4O95819 1239 aaPredicted RBP16.08■□□□□ 0.16
ABCF3-212ENST00000478288 ZFPM1Q8IX07 1006 aa16.08■□□□□ 0.16
ABCF3-212ENST00000478288 SCYL3Q8IZE3 742 aa16.08■□□□□ 0.16
ABCF3-212ENST00000478288 XAGE2Q96GT9 111 aa16.08■□□□□ 0.16
ABCF3-212ENST00000478288 SLC45A1Q9Y2W3 748 aa16.08■□□□□ 0.16
ABCF3-212ENST00000478288 A0A0G2JLL6 359 aaPredicted RBP16.07■□□□□ 0.16
ABCF3-212ENST00000478288 TIMM10P62072 90 aa16.07■□□□□ 0.16
ABCF3-212ENST00000478288 FASTKD5Q7L8L6 764 aaKnown RBP16.07■□□□□ 0.16
ABCF3-212ENST00000478288 PRRT2Q7Z6L0 340 aaPredicted RBP16.07■□□□□ 0.16
ABCF3-212ENST00000478288 ABCF2Q9UG63 623 aa16.07■□□□□ 0.16
ABCF3-212ENST00000478288 SRRDQ9UH36 339 aa16.07■□□□□ 0.16
ABCF3-212ENST00000478288 MROH7-TTC4A0A0A0MT08 1334 aa16.07■□□□□ 0.16
ABCF3-212ENST00000478288 GPR75-ASB3A0A0A6YYF3 556 aa16.06■□□□□ 0.16
ABCF3-212ENST00000478288 TRIM27P14373 513 aa16.06■□□□□ 0.16
ABCF3-212ENST00000478288 HOXD10P28358 340 aa16.06■□□□□ 0.16
ABCF3-212ENST00000478288 BTDP43251 543 aa16.06■□□□□ 0.16
ABCF3-212ENST00000478288 TFCP2Q12800 502 aa16.06■□□□□ 0.16
ABCF3-212ENST00000478288 GPAT2Q6NUI2 795 aa16.06■□□□□ 0.16
ABCF3-212ENST00000478288 SH3BP5LQ7L8J4 393 aa16.06■□□□□ 0.16
ABCF3-212ENST00000478288 TRIM47Q96LD4 638 aa16.06■□□□□ 0.16
ABCF3-212ENST00000478288 PICK1Q9NRD5 415 aa16.06■□□□□ 0.16
ABCF3-212ENST00000478288 CPA4Q9UI42 421 aa16.06■□□□□ 0.16
ABCF3-212ENST00000478288 TBC1D12O60347 775 aa16.05■□□□□ 0.16
ABCF3-212ENST00000478288 CTNND1O60716 968 aaKnown RBP16.05■□□□□ 0.16
ABCF3-212ENST00000478288 GNAI2P04899 355 aa16.05■□□□□ 0.16
ABCF3-212ENST00000478288 BCRP11274 1271 aa16.05■□□□□ 0.16
ABCF3-212ENST00000478288 PTPRAP18433 802 aa16.05■□□□□ 0.16
ABCF3-212ENST00000478288 CTGFP29279 349 aa16.05■□□□□ 0.16
ABCF3-212ENST00000478288 PSMC4P43686 418 aa16.05■□□□□ 0.16
ABCF3-212ENST00000478288 SLC4A8Q2Y0W8 1093 aa16.05■□□□□ 0.16
ABCF3-212ENST00000478288 ATF7IPQ6VMQ6 1270 aa16.05■□□□□ 0.16
ABCF3-212ENST00000478288 ERICH6Q7L0X2 663 aa16.05■□□□□ 0.16
ABCF3-212ENST00000478288 AFG3L2Q9Y4W6 797 aa16.05■□□□□ 0.16
ABCF3-212ENST00000478288 ZHX2Q9Y6X8 837 aa16.05■□□□□ 0.16
ABCF3-212ENST00000478288 DOCK3Q8IZD9 2030 aa16.05■□□□□ 0.16
ABCF3-212ENST00000478288 MAST2Q6P0Q8 1798 aa16.05■□□□□ 0.16
ABCF3-212ENST00000478288 ATAD5Q96QE3 1844 aa16.04■□□□□ 0.16
ABCF3-212ENST00000478288 OSBPP22059 807 aa16.04■□□□□ 0.16
ABCF3-212ENST00000478288 ARID4AP29374 1257 aaPredicted RBP16.04■□□□□ 0.16
ABCF3-212ENST00000478288 RHBDL3P58872 404 aa16.04■□□□□ 0.16
ABCF3-212ENST00000478288 GSTO1P78417 241 aa16.04■□□□□ 0.16
ABCF3-212ENST00000478288 MECOMQ03112 1051 aa16.04■□□□□ 0.16
ABCF3-212ENST00000478288 ZSCAN29Q8IWY8 852 aaPredicted RBP16.04■□□□□ 0.16
ABCF3-212ENST00000478288 SH3TC2Q8TF17 1288 aa16.04■□□□□ 0.16
ABCF3-212ENST00000478288 DDX4Q9NQI0 724 aaKnown RBP16.04■□□□□ 0.16
ABCF3-212ENST00000478288 LOC285556D6RIA3 1793 aa16.04■□□□□ 0.16
ABCF3-212ENST00000478288 DDTLA6NHG4 134 aaPredicted RBP16.03■□□□□ 0.16
ABCF3-212ENST00000478288 FCGRTP55899 365 aa16.03■□□□□ 0.16
ABCF3-212ENST00000478288 SPATA5Q8NB90 893 aa16.03■□□□□ 0.16
ABCF3-212ENST00000478288 ZNF384Q8TF68 577 aa16.03■□□□□ 0.16
ABCF3-212ENST00000478288 NSUN4Q96CB9 384 aaKnown RBP16.03■□□□□ 0.16
ABCF3-212ENST00000478288 HMG20BQ9P0W2 317 aa16.03■□□□□ 0.16
ABCF3-212ENST00000478288 FOCADQ5VW36 1801 aa16.03■□□□□ 0.16
ABCF3-212ENST00000478288 SZT2Q5T011 3432 aa16.02■□□□□ 0.16
ABCF3-212ENST00000478288 MYPNQ86TC9 1320 aa16.02■□□□□ 0.16
ABCF3-212ENST00000478288 IGSF3O75054 1194 aa16.02■□□□□ 0.16
ABCF3-212ENST00000478288 FMNL1O95466 1100 aaPredicted RBP16.02■□□□□ 0.16
ABCF3-212ENST00000478288 LDHCP07864 332 aa16.02■□□□□ 0.16
ABCF3-212ENST00000478288 NKX2-3Q8TAU0 364 aa16.02■□□□□ 0.16
ABCF3-212ENST00000478288 RAET1EQ8TD07 263 aa16.02■□□□□ 0.16
ABCF3-212ENST00000478288 TBC1D2Q9BYX2 928 aa16.02■□□□□ 0.16
ABCF3-212ENST00000478288 CDK5RAP2Q96SN8 1893 aa16.01■□□□□ 0.15
ABCF3-212ENST00000478288 UQCRFS1P1P0C7P4 283 aa16.01■□□□□ 0.15
ABCF3-212ENST00000478288 CYP2C8P10632 490 aa16.01■□□□□ 0.15
ABCF3-212ENST00000478288 GRK4P32298 578 aa16.01■□□□□ 0.15
ABCF3-212ENST00000478288 PICALMQ13492 652 aa16.01■□□□□ 0.15
ABCF3-212ENST00000478288 HABP4Q5JVS0 413 aaKnown RBP16.01■□□□□ 0.15
ABCF3-212ENST00000478288 NEUROD6Q96NK8 337 aa16.01■□□□□ 0.15
ABCF3-212ENST00000478288 OSBPL5Q9H0X9 879 aaPredicted RBP16.01■□□□□ 0.15
ABCF3-212ENST00000478288 GPR108Q9NPR9 543 aa16.01■□□□□ 0.15
ABCF3-212ENST00000478288 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.01■□□□□ 0.15
ABCF3-212ENST00000478288 PNMA6EA0A0J9YXQ4 647 aa16■□□□□ 0.15
ABCF3-212ENST00000478288 G3BP1Q13283 466 aaKnown RBP eCLIP16■□□□□ 0.15
ABCF3-212ENST00000478288 GORABQ5T7V8 394 aa16■□□□□ 0.15
ABCF3-212ENST00000478288 SLAIN1Q8ND83 568 aa16■□□□□ 0.15
ABCF3-212ENST00000478288 AGTPBP1Q9UPW5 1226 aa16■□□□□ 0.15
ABCF3-212ENST00000478288 GJB1P08034 283 aa15.99■□□□□ 0.15
ABCF3-212ENST00000478288 CAPN2P17655 700 aa15.99■□□□□ 0.15
ABCF3-212ENST00000478288 MCAMP43121 646 aa15.99■□□□□ 0.15
ABCF3-212ENST00000478288 PRKCZQ05513 592 aa15.99■□□□□ 0.15
ABCF3-212ENST00000478288 PI16Q6UXB8 463 aa15.99■□□□□ 0.15
ABCF3-212ENST00000478288 PROCA1Q8NCQ7 364 aaPredicted RBP15.99■□□□□ 0.15
ABCF3-212ENST00000478288 SHISA4Q96DD7 197 aa15.99■□□□□ 0.15
ABCF3-212ENST00000478288 HERC5Q9UII4 1024 aaKnown RBP15.99■□□□□ 0.15
ABCF3-212ENST00000478288 PNMA3Q9UL41 463 aa15.99■□□□□ 0.15
ABCF3-212ENST00000478288 SIPA1L1O43166 1804 aa15.98■□□□□ 0.15
ABCF3-212ENST00000478288 BCAR3O75815 825 aa15.98■□□□□ 0.15
ABCF3-212ENST00000478288 GJA8P48165 433 aa15.98■□□□□ 0.15
ABCF3-212ENST00000478288 UBXN2AP68543 259 aa15.98■□□□□ 0.15
ABCF3-212ENST00000478288 IRF5Q13568 498 aa15.98■□□□□ 0.15
ABCF3-212ENST00000478288 POLA2Q14181 598 aa15.98■□□□□ 0.15
ABCF3-212ENST00000478288 MTFR1Q15390 333 aa15.98■□□□□ 0.15
ABCF3-212ENST00000478288 ZKSCAN2Q63HK3 967 aa15.98■□□□□ 0.15
ABCF3-212ENST00000478288 GADL1Q6ZQY3 521 aa15.98■□□□□ 0.15
ABCF3-212ENST00000478288 SMCR8Q8TEV9 937 aaPredicted RBP15.98■□□□□ 0.15
ABCF3-212ENST00000478288 FRAT1Q92837 279 aaPredicted RBP15.98■□□□□ 0.15
ABCF3-212ENST00000478288 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.98■□□□□ 0.15
ABCF3-212ENST00000478288 RAI14Q9P0K7 980 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms