RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, human

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-210	ENST00000478169	SLC45A1	Q9Y2W3	748 aa		12.03	□□□□□ -0.48
CCM2-210	ENST00000478169	DOCK1	Q14185	1865 aa		12.03	□□□□□ -0.48
CCM2-210	ENST00000478169		A0A0G2JLL6	359 aa	Predicted RBP	12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	CYP2C8	P10632	490 aa		12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	PTPRA	P18433	802 aa		12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	IL15	P40933	162 aa	Predicted RBP	12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	MAP3K10	Q02779	954 aa		12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	PRKCZ	Q05513	592 aa		12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	CHRDL2	Q6WN34	429 aa		12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	PRRT2	Q7Z6L0	340 aa	Predicted RBP	12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	ZFPM1	Q8IX07	1006 aa		12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	SCYL3	Q8IZE3	742 aa		12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	SLAIN1	Q8ND83	568 aa		12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	PICK1	Q9NRD5	415 aa		12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	AFG3L2	Q9Y4W6	797 aa		12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	ZHX2	Q9Y6X8	837 aa		12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	ATRNL1	Q5VV63	1379 aa		12.02	□□□□□ -0.49
CCM2-210	ENST00000478169	UBTFL1	P0CB47	393 aa	Predicted RBP	12.01	□□□□□ -0.49
CCM2-210	ENST00000478169	PHKA1	P46020	1223 aa		12.01	□□□□□ -0.49
CCM2-210	ENST00000478169	RGS3	P49796	1198 aa		12.01	□□□□□ -0.49
CCM2-210	ENST00000478169	SLF2	Q8IX21	1173 aa		12.01	□□□□□ -0.49
CCM2-210	ENST00000478169	PXYLP1	Q8TE99	480 aa		12.01	□□□□□ -0.49
CCM2-210	ENST00000478169	FAM163A	Q96GL9	167 aa	Predicted RBP	12.01	□□□□□ -0.49
CCM2-210	ENST00000478169	SIL1	Q9H173	461 aa		12.01	□□□□□ -0.49
CCM2-210	ENST00000478169	NR2E3	Q9Y5X4	410 aa		12.01	□□□□□ -0.49
CCM2-210	ENST00000478169	LRRFIP2	Q9Y608	721 aa	Known RBP	12.01	□□□□□ -0.49
CCM2-210	ENST00000478169	GAK	O14976	1311 aa		12.01	□□□□□ -0.49
CCM2-210	ENST00000478169	ZNF316	A6NFI3	1004 aa	Predicted RBP	12	□□□□□ -0.49
CCM2-210	ENST00000478169	ADCY3	O60266	1144 aa		12	□□□□□ -0.49
CCM2-210	ENST00000478169	CTNND1	O60716	968 aa	Known RBP	12	□□□□□ -0.49
CCM2-210	ENST00000478169	SGPL1	O95470	568 aa		12	□□□□□ -0.49
CCM2-210	ENST00000478169	SLFN5	Q08AF3	891 aa		12	□□□□□ -0.49
CCM2-210	ENST00000478169	IRF5	Q13568	498 aa		12	□□□□□ -0.49
CCM2-210	ENST00000478169	U2AF1L4	Q8WU68	220 aa	Known RBP	12	□□□□□ -0.49
CCM2-210	ENST00000478169	RBM27	Q9P2N5	1060 aa	Known RBP	12	□□□□□ -0.49
CCM2-210	ENST00000478169	GABRQ	Q9UN88	632 aa		12	□□□□□ -0.49
CCM2-210	ENST00000478169	PDS5A	Q29RF7	1337 aa	Known RBP	12	□□□□□ -0.49
CCM2-210	ENST00000478169	RFX7	Q2KHR2	1363 aa		12	□□□□□ -0.49
CCM2-210	ENST00000478169	FARP2	O94887	1054 aa	Predicted RBP	11.99	□□□□□ -0.49
CCM2-210	ENST00000478169	FLT3LG	P49771	235 aa		11.99	□□□□□ -0.49
CCM2-210	ENST00000478169	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.99	□□□□□ -0.49
CCM2-210	ENST00000478169	CCDC102B	Q68D86	513 aa		11.99	□□□□□ -0.49
CCM2-210	ENST00000478169	GADL1	Q6ZQY3	521 aa		11.99	□□□□□ -0.49
CCM2-210	ENST00000478169	SH3BP5L	Q7L8J4	393 aa		11.99	□□□□□ -0.49
CCM2-210	ENST00000478169	DZIP1	Q86YF9	867 aa	Known RBP	11.99	□□□□□ -0.49
CCM2-210	ENST00000478169	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.99	□□□□□ -0.49
CCM2-210	ENST00000478169	UNC93B1	Q9H1C4	597 aa		11.99	□□□□□ -0.49
CCM2-210	ENST00000478169	COPRS	Q9NQ92	184 aa		11.99	□□□□□ -0.49
CCM2-210	ENST00000478169	SMC4	Q9NTJ3	1288 aa		11.99	□□□□□ -0.49
CCM2-210	ENST00000478169	ATAD5	Q96QE3	1844 aa		11.98	□□□□□ -0.49
CCM2-210	ENST00000478169	DDTL	A6NHG4	134 aa	Predicted RBP	11.98	□□□□□ -0.49
CCM2-210	ENST00000478169	TNPO2	O14787	897 aa	Known RBP	11.98	□□□□□ -0.49
CCM2-210	ENST00000478169	TBC1D12	O60347	775 aa		11.98	□□□□□ -0.49
CCM2-210	ENST00000478169	NPM3	O75607	178 aa	Known RBP	11.98	□□□□□ -0.49
CCM2-210	ENST00000478169	RASGRF1	Q13972	1273 aa		11.98	□□□□□ -0.49
CCM2-210	ENST00000478169	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.98	□□□□□ -0.49
CCM2-210	ENST00000478169	PRO3102	Q9H379	93 aa		11.98	□□□□□ -0.49
CCM2-210	ENST00000478169	ABCF2	Q9UG63	623 aa		11.98	□□□□□ -0.49
CCM2-210	ENST00000478169	SZT2	Q5T011	3432 aa		11.98	□□□□□ -0.49
CCM2-210	ENST00000478169	GPR75-ASB3	A0A0A6YYF3	556 aa		11.97	□□□□□ -0.49
CCM2-210	ENST00000478169		A0A1W2PPC1	479 aa		11.97	□□□□□ -0.49
CCM2-210	ENST00000478169	ZBTB7B	O15156	539 aa	Predicted RBP	11.97	□□□□□ -0.49
CCM2-210	ENST00000478169	MAP4K4	O95819	1239 aa	Predicted RBP	11.97	□□□□□ -0.49
CCM2-210	ENST00000478169	CT47B1	P0C2W7	299 aa	Predicted RBP	11.97	□□□□□ -0.49
CCM2-210	ENST00000478169	ADORA1	P30542	326 aa		11.97	□□□□□ -0.49
CCM2-210	ENST00000478169	BTD	P43251	543 aa		11.97	□□□□□ -0.49
CCM2-210	ENST00000478169	COA7	Q96BR5	231 aa		11.97	□□□□□ -0.49
CCM2-210	ENST00000478169	DDX4	Q9NQI0	724 aa	Known RBP	11.97	□□□□□ -0.49
CCM2-210	ENST00000478169	PNMA3	Q9UL41	463 aa		11.97	□□□□□ -0.49
CCM2-210	ENST00000478169	AGTPBP1	Q9UPW5	1226 aa		11.97	□□□□□ -0.49
CCM2-210	ENST00000478169	PA2G4	Q9UQ80	394 aa	Known RBP	11.97	□□□□□ -0.49
CCM2-210	ENST00000478169	AKAP2	Q9Y2D5	859 aa		11.97	□□□□□ -0.49
CCM2-210	ENST00000478169	ALPK3	Q96L96	1907 aa		11.97	□□□□□ -0.49
CCM2-210	ENST00000478169	RANBP2	P49792	3224 aa	Known RBP	11.97	□□□□□ -0.49
CCM2-210	ENST00000478169	MROH7-TTC4	A0A0A0MT08	1334 aa		11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	TRIM75P	A6NK02	468 aa		11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	TFRC	P02786	760 aa	Known RBP	11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	INHA	P05111	366 aa		11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	ELN	P15502	786 aa		11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	TIMM10	P62072	90 aa		11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	PICALM	Q13492	652 aa		11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	FAM110C	Q1W6H9	321 aa		11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	ERICH6	Q7L0X2	663 aa		11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	TBC1D2	Q9BYX2	928 aa		11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	API5	Q9BZZ5	524 aa	Known RBP	11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	PAK6	Q9NQU5	681 aa	Predicted RBP	11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	NOB1	Q9ULX3	412 aa	Known RBP	11.96	□□□□□ -0.49
CCM2-210	ENST00000478169	LOC285556	D6RIA3	1793 aa		11.96	□□□□□ -0.49
CCM2-210	ENST00000478169		A0A1B0GUL7	405 aa		11.95	□□□□□ -0.5
CCM2-210	ENST00000478169	EVI5	O60447	810 aa		11.95	□□□□□ -0.5
CCM2-210	ENST00000478169	LDHC	P07864	332 aa		11.95	□□□□□ -0.5
CCM2-210	ENST00000478169	RHBDL3	P58872	404 aa		11.95	□□□□□ -0.5
CCM2-210	ENST00000478169	MECOM	Q03112	1051 aa		11.95	□□□□□ -0.5
CCM2-210	ENST00000478169	MVP	Q14764	893 aa	Known RBP	11.95	□□□□□ -0.5
CCM2-210	ENST00000478169	TRMT2A	Q8IZ69	625 aa	Known RBP	11.95	□□□□□ -0.5
CCM2-210	ENST00000478169	ANKRD13C	Q8N6S4	541 aa		11.95	□□□□□ -0.5
CCM2-210	ENST00000478169	XAGE2	Q96GT9	111 aa		11.95	□□□□□ -0.5
CCM2-210	ENST00000478169	DEFB118	Q96PH6	123 aa		11.95	□□□□□ -0.5

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