RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 IDI2Q9BXS1 227 aa11.89□□□□□ -0.51
NIFK-205ENST00000477693 USP40Q9NVE5 1235 aa11.89□□□□□ -0.51
NIFK-205ENST00000477693 FAM198AQ9UFP1 575 aa11.89□□□□□ -0.51
NIFK-205ENST00000477693 NDUFB9Q9Y6M9 179 aa11.89□□□□□ -0.51
NIFK-205ENST00000477693 FAM155AB1AL88 458 aaPredicted RBP11.88□□□□□ -0.51
NIFK-205ENST00000477693 PPP1R12BO60237 982 aaPredicted RBP11.88□□□□□ -0.51
NIFK-205ENST00000477693 EIF5BO60841 1220 aaKnown RBP11.88□□□□□ -0.51
NIFK-205ENST00000477693 SLC10A3P09131 477 aa11.88□□□□□ -0.51
NIFK-205ENST00000477693 MAP2K2P36507 400 aa11.88□□□□□ -0.51
NIFK-205ENST00000477693 ZNF157P51786 506 aaPredicted RBP11.88□□□□□ -0.51
NIFK-205ENST00000477693 RHBDL3P58872 404 aa11.88□□□□□ -0.51
NIFK-205ENST00000477693 NOGQ13253 232 aa11.88□□□□□ -0.51
NIFK-205ENST00000477693 TTLL12Q14166 644 aaPredicted RBP11.88□□□□□ -0.51
NIFK-205ENST00000477693 CDAN1Q8IWY9 1227 aa11.88□□□□□ -0.51
NIFK-205ENST00000477693 FAM151AQ8WW52 585 aa11.88□□□□□ -0.51
NIFK-205ENST00000477693 CCDC102AQ96A19 550 aa11.88□□□□□ -0.51
NIFK-205ENST00000477693 ANTXR1Q9H6X2 564 aa11.88□□□□□ -0.51
NIFK-205ENST00000477693 DOCK2Q92608 1830 aa11.88□□□□□ -0.51
NIFK-205ENST00000477693 UBE2Q2LH0YL09 131 aa11.87□□□□□ -0.51
NIFK-205ENST00000477693 ENTPD3O75355 529 aa11.87□□□□□ -0.51
NIFK-205ENST00000477693 USP2O75604 605 aaPredicted RBP11.87□□□□□ -0.51
NIFK-205ENST00000477693 WDHD1O75717 1129 aaPredicted RBP11.87□□□□□ -0.51
NIFK-205ENST00000477693 IDH1O75874 414 aaKnown RBP11.87□□□□□ -0.51
NIFK-205ENST00000477693 PPP4CP60510 307 aa11.87□□□□□ -0.51
NIFK-205ENST00000477693 MAP3K12Q12852 859 aa11.87□□□□□ -0.51
NIFK-205ENST00000477693 RASAL3Q86YV0 1011 aa11.87□□□□□ -0.51
NIFK-205ENST00000477693 HOOK2Q96ED9 719 aa11.87□□□□□ -0.51
NIFK-205ENST00000477693 GPATCH3Q96I76 525 aa11.87□□□□□ -0.51
NIFK-205ENST00000477693 PHF12Q96QT6 1004 aa11.87□□□□□ -0.51
NIFK-205ENST00000477693 HAUS7Q99871 368 aa11.87□□□□□ -0.51
NIFK-205ENST00000477693 BCL11AQ9H165 835 aa11.87□□□□□ -0.51
NIFK-205ENST00000477693 ECHDC1Q9NTX5 307 aa11.87□□□□□ -0.51
NIFK-205ENST00000477693 ANGEL1Q9UNK9 670 aaKnown RBP11.87□□□□□ -0.51
NIFK-205ENST00000477693 FZD1Q9UP38 647 aa11.87□□□□□ -0.51
NIFK-205ENST00000477693 AOC2O75106 756 aa11.86□□□□□ -0.51
NIFK-205ENST00000477693 BAG3O95817 575 aa11.86□□□□□ -0.51
NIFK-205ENST00000477693 PLCG2P16885 1265 aa11.86□□□□□ -0.51
NIFK-205ENST00000477693 IREB2P48200 963 aaKnown RBP11.86□□□□□ -0.51
NIFK-205ENST00000477693 RGS3P49796 1198 aa11.86□□□□□ -0.51
NIFK-205ENST00000477693 MAP2K1Q02750 393 aaPredicted RBP11.86□□□□□ -0.51
NIFK-205ENST00000477693 MLLT1Q03111 559 aaPredicted RBP11.86□□□□□ -0.51
NIFK-205ENST00000477693 GRM1Q13255 1194 aa11.86□□□□□ -0.51
NIFK-205ENST00000477693 PRKG1Q13976 671 aa11.86□□□□□ -0.51
NIFK-205ENST00000477693 ADGRA1Q86SQ6 560 aa11.86□□□□□ -0.51
NIFK-205ENST00000477693 CERS3Q8IU89 383 aa11.86□□□□□ -0.51
NIFK-205ENST00000477693 DNAJC2Q99543 621 aaKnown RBP11.86□□□□□ -0.51
NIFK-205ENST00000477693 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
NIFK-205ENST00000477693 BOLA2Q9H3K6 86 aa11.86□□□□□ -0.51
NIFK-205ENST00000477693 OSBPL3Q9H4L5 887 aa11.86□□□□□ -0.51
NIFK-205ENST00000477693 DDX4Q9NQI0 724 aaKnown RBP11.86□□□□□ -0.51
NIFK-205ENST00000477693 PAG1Q9NWQ8 432 aa11.86□□□□□ -0.51
NIFK-205ENST00000477693 WBP1LQ9NX94 342 aa11.86□□□□□ -0.51
NIFK-205ENST00000477693 COL2A1P02458 1487 aaPredicted RBP11.85□□□□□ -0.51
NIFK-205ENST00000477693 ATRNL1Q5VV63 1379 aa11.85□□□□□ -0.51
NIFK-205ENST00000477693 GOLIM4O00461 696 aa11.85□□□□□ -0.51
NIFK-205ENST00000477693 TCP10Q12799 353 aa11.85□□□□□ -0.51
NIFK-205ENST00000477693 ZFPM1Q8IX07 1006 aa11.85□□□□□ -0.51
NIFK-205ENST00000477693 ANKRD13AQ8IZ07 590 aa11.85□□□□□ -0.51
NIFK-205ENST00000477693 MAGEB6Q8N7X4 407 aa11.85□□□□□ -0.51
NIFK-205ENST00000477693 ABHD8Q96I13 439 aa11.85□□□□□ -0.51
NIFK-205ENST00000477693 LNPKQ9C0E8 428 aa11.85□□□□□ -0.51
NIFK-205ENST00000477693 AATFQ9NY61 560 aaKnown RBP eCLIP11.85□□□□□ -0.51
NIFK-205ENST00000477693 STAP2Q9UGK3 403 aa11.85□□□□□ -0.51
NIFK-205ENST00000477693 MYO5AQ9Y4I1 1855 aaKnown RBP11.85□□□□□ -0.51
NIFK-205ENST00000477693 TTC41PQ6P2S7 1318 aa11.85□□□□□ -0.51
NIFK-205ENST00000477693 SALL3Q9BXA9 1300 aa11.85□□□□□ -0.51
NIFK-205ENST00000477693 CYP7A1P22680 504 aa11.84□□□□□ -0.51
NIFK-205ENST00000477693 LBX1P52954 281 aa11.84□□□□□ -0.51
NIFK-205ENST00000477693 PICALMQ13492 652 aa11.84□□□□□ -0.51
NIFK-205ENST00000477693 SLC9C2Q5TAH2 1124 aa11.84□□□□□ -0.51
NIFK-205ENST00000477693 DCAF15Q66K64 600 aa11.84□□□□□ -0.51
NIFK-205ENST00000477693 TICAM2Q86XR7 235 aa11.84□□□□□ -0.51
NIFK-205ENST00000477693 IFNLR1Q8IU57 520 aaPredicted RBP11.84□□□□□ -0.51
NIFK-205ENST00000477693 TEX11Q8IYF3 940 aa11.84□□□□□ -0.51
NIFK-205ENST00000477693 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.84□□□□□ -0.51
NIFK-205ENST00000477693 SH3RF3Q8TEJ3 882 aaPredicted RBP11.84□□□□□ -0.51
NIFK-205ENST00000477693 EDC3Q96F86 508 aaKnown RBP11.84□□□□□ -0.51
NIFK-205ENST00000477693 ZIC5Q96T25 663 aa11.84□□□□□ -0.51
NIFK-205ENST00000477693 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
NIFK-205ENST00000477693 TCRBV5S4A2TA0A5A2 114 aa11.83□□□□□ -0.52
NIFK-205ENST00000477693 ERC2O15083 957 aa11.83□□□□□ -0.52
NIFK-205ENST00000477693 PDE6AP16499 860 aa11.83□□□□□ -0.52
NIFK-205ENST00000477693 MX1P20591 662 aa11.83□□□□□ -0.52
NIFK-205ENST00000477693 MAP3K10Q02779 954 aa11.83□□□□□ -0.52
NIFK-205ENST00000477693 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.83□□□□□ -0.52
NIFK-205ENST00000477693 SH3BP5LQ7L8J4 393 aa11.83□□□□□ -0.52
NIFK-205ENST00000477693 PI4K2BQ8TCG2 481 aa11.83□□□□□ -0.52
NIFK-205ENST00000477693 SLC10A4Q96EP9 437 aa11.83□□□□□ -0.52
NIFK-205ENST00000477693 CLMNQ96JQ2 1002 aa11.83□□□□□ -0.52
NIFK-205ENST00000477693 CSRNP1Q96S65 589 aa11.83□□□□□ -0.52
NIFK-205ENST00000477693 OSBPL5Q9H0X9 879 aaPredicted RBP11.83□□□□□ -0.52
NIFK-205ENST00000477693 OTOFQ9HC10 1997 aa11.83□□□□□ -0.52
NIFK-205ENST00000477693 DDTLA6NHG4 134 aaPredicted RBP11.82□□□□□ -0.52
NIFK-205ENST00000477693 GALR2O43603 387 aaPredicted RBP11.82□□□□□ -0.52
NIFK-205ENST00000477693 GLRX3O76003 335 aaKnown RBP11.82□□□□□ -0.52
NIFK-205ENST00000477693 ZBTB48P10074 688 aaPredicted RBP11.82□□□□□ -0.52
NIFK-205ENST00000477693 ADD2P35612 726 aa11.82□□□□□ -0.52
NIFK-205ENST00000477693 MAP3K9P80192 1104 aa11.82□□□□□ -0.52
NIFK-205ENST00000477693 KIF23Q02241 960 aaPredicted RBP11.82□□□□□ -0.52
NIFK-205ENST00000477693 BMP2KLQ5H9B9 411 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms