RNA–Protein interactions for RNA: ENST00000477585.1

AGRN-206, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 707 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-206ENST00000477585 TEX11Q8IYF3 940 aa29.52■■■□□ 2.32
AGRN-206ENST00000477585 DDX4Q9NQI0 724 aaKnown RBP29.52■■■□□ 2.32
AGRN-206ENST00000477585 AATFQ9NY61 560 aaKnown RBP eCLIP29.52■■■□□ 2.32
AGRN-206ENST00000477585 CYP7A1P22680 504 aa29.51■■■□□ 2.31
AGRN-206ENST00000477585 TM4SF4P48230 202 aa29.51■■■□□ 2.31
AGRN-206ENST00000477585 INHBEP58166 350 aa29.51■■■□□ 2.31
AGRN-206ENST00000477585 MIGA2Q7L4E1 593 aa29.51■■■□□ 2.31
AGRN-206ENST00000477585 WRNIP1Q96S55 665 aa29.51■■■□□ 2.31
AGRN-206ENST00000477585 DNAJC2Q99543 621 aaKnown RBP29.51■■■□□ 2.31
AGRN-206ENST00000477585 SUPT16HQ9Y5B9 1047 aaKnown RBP29.51■■■□□ 2.31
AGRN-206ENST00000477585 COL2A1P02458 1487 aaPredicted RBP29.5■■■□□ 2.31
AGRN-206ENST00000477585 MANSC4A6NHS7 340 aaPredicted RBP29.5■■■□□ 2.31
AGRN-206ENST00000477585 MKRN3Q13064 507 aaKnown RBP29.5■■■□□ 2.31
AGRN-206ENST00000477585 VGLL4Q14135 290 aa29.5■■■□□ 2.31
AGRN-206ENST00000477585 ADGRA1Q86SQ6 560 aa29.5■■■□□ 2.31
AGRN-206ENST00000477585 ELP3Q9H9T3 547 aa29.5■■■□□ 2.31
AGRN-206ENST00000477585 CDK5RAP2Q96SN8 1893 aa29.5■■■□□ 2.31
AGRN-206ENST00000477585 ATRNL1Q5VV63 1379 aa29.5■■■□□ 2.31
AGRN-206ENST00000477585 FOCADQ5VW36 1801 aa29.5■■■□□ 2.31
AGRN-206ENST00000477585 HDAC1Q13547 482 aaPredicted RBP29.49■■■□□ 2.31
AGRN-206ENST00000477585 MAGEB6Q8N7X4 407 aa29.49■■■□□ 2.31
AGRN-206ENST00000477585 SH3RF3Q8TEJ3 882 aaPredicted RBP29.49■■■□□ 2.31
AGRN-206ENST00000477585 BOLA2Q9H3K6 86 aa29.49■■■□□ 2.31
AGRN-206ENST00000477585 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.49■■■□□ 2.31
AGRN-206ENST00000477585 ZNF112Q9UJU3 913 aa29.49■■■□□ 2.31
AGRN-206ENST00000477585 GOLIM4O00461 696 aa29.48■■■□□ 2.31
AGRN-206ENST00000477585 SH3BP5LQ7L8J4 393 aa29.48■■■□□ 2.31
AGRN-206ENST00000477585 GPATCH3Q96I76 525 aa29.48■■■□□ 2.31
AGRN-206ENST00000477585 HAUS7Q99871 368 aa29.48■■■□□ 2.31
AGRN-206ENST00000477585 ECHDC1Q9NTX5 307 aa29.48■■■□□ 2.31
AGRN-206ENST00000477585 PAG1Q9NWQ8 432 aa29.48■■■□□ 2.31
AGRN-206ENST00000477585 RNF186Q9NXI6 227 aa29.48■■■□□ 2.31
AGRN-206ENST00000477585 DDTLA6NHG4 134 aaPredicted RBP29.47■■■□□ 2.31
AGRN-206ENST00000477585 MAP3K10Q02779 954 aa29.47■■■□□ 2.31
AGRN-206ENST00000477585 COL13A1Q5TAT6 717 aaPredicted RBP29.47■■■□□ 2.31
AGRN-206ENST00000477585 GCC1Q96CN9 775 aa29.47■■■□□ 2.31
AGRN-206ENST00000477585 OPTNQ96CV9 577 aa29.47■■■□□ 2.31
AGRN-206ENST00000477585 OSBPL5Q9H0X9 879 aaPredicted RBP29.47■■■□□ 2.31
AGRN-206ENST00000477585 TRPA1O75762 1119 aa29.45■■■□□ 2.31
AGRN-206ENST00000477585 ERO1BQ86YB8 467 aa29.45■■■□□ 2.31
AGRN-206ENST00000477585 SNCAIPQ9Y6H5 919 aa29.45■■■□□ 2.31
AGRN-206ENST00000477585 MYH7P12883 1935 aa29.45■■■□□ 2.3
AGRN-206ENST00000477585 SPDYE5A6NIY4 337 aa29.44■■■□□ 2.3
AGRN-206ENST00000477585 TBC1D12O60347 775 aa29.44■■■□□ 2.3
AGRN-206ENST00000477585 GJA5P36382 358 aa29.44■■■□□ 2.3
AGRN-206ENST00000477585 SLC9C2Q5TAH2 1124 aa29.44■■■□□ 2.3
AGRN-206ENST00000477585 ZKSCAN4Q969J2 545 aaPredicted RBP29.44■■■□□ 2.3
AGRN-206ENST00000477585 DHX36Q9H2U1 1008 aaKnown RBP29.44■■■□□ 2.3
AGRN-206ENST00000477585 ZBTB47Q9UFB7 747 aaPredicted RBP29.44■■■□□ 2.3
AGRN-206ENST00000477585 TSKSQ9UJT2 592 aa29.44■■■□□ 2.3
AGRN-206ENST00000477585 INPP5BP32019 993 aa29.43■■■□□ 2.3
AGRN-206ENST00000477585 NOL9Q5SY16 702 aaKnown RBP29.43■■■□□ 2.3
AGRN-206ENST00000477585 TGFBRAP1Q8WUH2 860 aa29.43■■■□□ 2.3
AGRN-206ENST00000477585 ALDH1A1P00352 501 aa29.42■■■□□ 2.3
AGRN-206ENST00000477585 PDE6AP16499 860 aa29.42■■■□□ 2.3
AGRN-206ENST00000477585 DYNLL1P63167 89 aaKnown RBP29.42■■■□□ 2.3
AGRN-206ENST00000477585 MIGA1Q8NAN2 632 aa29.42■■■□□ 2.3
AGRN-206ENST00000477585 EXOC6Q8TAG9 804 aa29.42■■■□□ 2.3
AGRN-206ENST00000477585 EDC3Q96F86 508 aaKnown RBP29.42■■■□□ 2.3
AGRN-206ENST00000477585 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.42■■■□□ 2.31e-12■■■■□ 22.1
AGRN-206ENST00000477585 CASP8AP2Q9UKL3 1982 aa29.42■■■□□ 2.3
AGRN-206ENST00000477585 OTUD5Q96G74 571 aa29.41■■■□□ 2.3
AGRN-206ENST00000477585 RWDD1Q9H446 243 aaPredicted RBP29.41■■■□□ 2.3
AGRN-206ENST00000477585 FLT1P17948 1338 aa29.41■■■□□ 2.3
AGRN-206ENST00000477585 MYH1P12882 1939 aa29.4■■■□□ 2.3
AGRN-206ENST00000477585 TESPA1A2RU30 521 aaPredicted RBP29.4■■■□□ 2.3
AGRN-206ENST00000477585 PHF20L1A8MW92 1017 aa29.4■■■□□ 2.3
AGRN-206ENST00000477585 GTF2A2P52657 109 aa29.4■■■□□ 2.3
AGRN-206ENST00000477585 PPATQ06203 517 aa29.4■■■□□ 2.3
AGRN-206ENST00000477585 OTUD7BQ6GQQ9 843 aa29.4■■■□□ 2.3
AGRN-206ENST00000477585 CNKSR2Q8WXI2 1034 aa29.4■■■□□ 2.3
AGRN-206ENST00000477585 PI4KBQ9UBF8 816 aa29.4■■■□□ 2.3
AGRN-206ENST00000477585 TTC41PQ6P2S7 1318 aa29.4■■■□□ 2.3
AGRN-206ENST00000477585 PPIL2Q13356 520 aa29.39■■■□□ 2.3
AGRN-206ENST00000477585 IFNL1Q8IU54 200 aa29.39■■■□□ 2.3
AGRN-206ENST00000477585 MAPKAPK5Q8IW41 473 aa29.39■■■□□ 2.3
AGRN-206ENST00000477585 MS4A4AQ96JQ5 239 aa29.39■■■□□ 2.3
AGRN-206ENST00000477585 CFHR5Q9BXR6 569 aa29.39■■■□□ 2.3
AGRN-206ENST00000477585 ZNF532Q9HCE3 1301 aa29.39■■■□□ 2.3
AGRN-206ENST00000477585 MAGEB6P1A0A0J9YX57 407 aa29.38■■■□□ 2.29
AGRN-206ENST00000477585 ANKRD45Q5TZF3 282 aa29.38■■■□□ 2.29
AGRN-206ENST00000477585 ZSCAN25Q6NSZ9 544 aa29.38■■■□□ 2.29
AGRN-206ENST00000477585 RIOK1Q9BRS2 568 aaKnown RBP29.38■■■□□ 2.29
AGRN-206ENST00000477585 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.38■■■□□ 2.29
AGRN-206ENST00000477585 HERC5Q9UII4 1024 aaKnown RBP29.38■■■□□ 2.29
AGRN-206ENST00000477585 TCRBV5S4A2TA0A5A2 114 aa29.37■■■□□ 2.29
AGRN-206ENST00000477585 ERC2O15083 957 aa29.37■■■□□ 2.29
AGRN-206ENST00000477585 CTNND1O60716 968 aaKnown RBP29.37■■■□□ 2.29
AGRN-206ENST00000477585 ADD2P35612 726 aa29.37■■■□□ 2.29
AGRN-206ENST00000477585 USP5P45974 858 aa29.37■■■□□ 2.29
AGRN-206ENST00000477585 SCYL3Q8IZE3 742 aa29.37■■■□□ 2.29
AGRN-206ENST00000477585 DOCK1Q14185 1865 aa29.36■■■□□ 2.29
AGRN-206ENST00000477585 UBE3CQ15386 1083 aa29.35■■■□□ 2.29
AGRN-206ENST00000477585 FOXP4Q8IVH2 680 aaPredicted RBP29.35■■■□□ 2.29
AGRN-206ENST00000477585 TNS4Q8IZW8 715 aa29.35■■■□□ 2.29
AGRN-206ENST00000477585 PICK1Q9NRD5 415 aa29.35■■■□□ 2.29
AGRN-206ENST00000477585 SIPA1L1O43166 1804 aa29.35■■■□□ 2.29
AGRN-206ENST00000477585 CCL15-CCL14A0A0B4J2E2 113 aa29.34■■■□□ 2.29
AGRN-206ENST00000477585 IGF2BP3O00425 579 aaKnown RBP eCLIP29.34■■■□□ 2.29
AGRN-206ENST00000477585 IRF6O14896 467 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms