RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 KCNB2Q92953 911 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 CRNKL1Q9BZJ0 848 aaKnown RBP11.11□□□□□ -0.63
PGK1-204ENST00000477335 DCP1AQ9NPI6 582 aaPredicted RBP11.11□□□□□ -0.63
PGK1-204ENST00000477335 FAM198AQ9UFP1 575 aa11.11□□□□□ -0.63
PGK1-204ENST00000477335 FLT1P17948 1338 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 FOCADQ5VW36 1801 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 WNT10BO00744 389 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 BAG3O95817 575 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 CYP21A2P08686 494 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 SLURP2P0DP57 97 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 RBM25P49756 843 aaKnown RBP11.1□□□□□ -0.63
PGK1-204ENST00000477335 HAND2P61296 217 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 DLGAP5Q15398 846 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 SLC4A8Q2Y0W8 1093 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 RBM26Q5T8P6 1007 aaKnown RBP11.1□□□□□ -0.63
PGK1-204ENST00000477335 SH3BP5LQ7L8J4 393 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 TBC1D10CQ8IV04 446 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 L3MBTL3Q96JM7 780 aaPredicted RBP11.1□□□□□ -0.63
PGK1-204ENST00000477335 C22orf23Q9BZE7 217 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 ZNF70Q9UC06 446 aaPredicted RBP11.1□□□□□ -0.63
PGK1-204ENST00000477335 SAP30BPQ9UHR5 308 aaKnown RBP11.1□□□□□ -0.63
PGK1-204ENST00000477335 HDAC9Q9UKV0 1011 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 SCAF8Q9UPN6 1271 aaKnown RBP11.1□□□□□ -0.63
PGK1-204ENST00000477335 SNX14Q9Y5W7 946 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 CNTNAP1P78357 1384 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 NAV1Q8NEY1 1877 aa11.1□□□□□ -0.63
PGK1-204ENST00000477335 ZMYM6O95789 1325 aa11.09□□□□□ -0.63
PGK1-204ENST00000477335 ZC3H4Q9UPT8 1303 aaKnown RBP11.09□□□□□ -0.63
PGK1-204ENST00000477335 ECM29Q5VYK3 1845 aa11.09□□□□□ -0.63
PGK1-204ENST00000477335 GLTPD2A6NH11 291 aa11.09□□□□□ -0.63
PGK1-204ENST00000477335 EPB41L2O43491 1005 aaKnown RBP11.09□□□□□ -0.63
PGK1-204ENST00000477335 APPP05067 770 aa11.09□□□□□ -0.63
PGK1-204ENST00000477335 GNAT2P19087 354 aa11.09□□□□□ -0.63
PGK1-204ENST00000477335 PICALMQ13492 652 aa11.09□□□□□ -0.63
PGK1-204ENST00000477335 KIF4BQ2VIQ3 1234 aa11.09□□□□□ -0.63
PGK1-204ENST00000477335 ADCK5Q3MIX3 580 aa11.09□□□□□ -0.63
PGK1-204ENST00000477335 CTR9Q6PD62 1173 aa11.09□□□□□ -0.63
PGK1-204ENST00000477335 CDAN1Q8IWY9 1227 aa11.09□□□□□ -0.63
PGK1-204ENST00000477335 OGFOD1Q8N543 542 aa11.09□□□□□ -0.63
PGK1-204ENST00000477335 IL17RAQ96F46 866 aa11.09□□□□□ -0.63
PGK1-204ENST00000477335 NOL10Q9BSC4 688 aaKnown RBP11.09□□□□□ -0.63
PGK1-204ENST00000477335 INCENPQ9NQS7 918 aa11.09□□□□□ -0.63
PGK1-204ENST00000477335 BAZ2AQ9UIF9 1905 aaKnown RBP11.09□□□□□ -0.63
PGK1-204ENST00000477335 LAMA4Q16363 1823 aa11.09□□□□□ -0.63
PGK1-204ENST00000477335 SIPA1L1O43166 1804 aa11.08□□□□□ -0.64
PGK1-204ENST00000477335 USP17L12C9JPN9 530 aa11.08□□□□□ -0.64
PGK1-204ENST00000477335 USP17L21D6R901 530 aa11.08□□□□□ -0.64
PGK1-204ENST00000477335 PRR29P0C7W0 189 aa11.08□□□□□ -0.64
PGK1-204ENST00000477335 USP5P45974 858 aa11.08□□□□□ -0.64
PGK1-204ENST00000477335 TDO2P48775 406 aa11.08□□□□□ -0.64
PGK1-204ENST00000477335 CTDSPL2Q05D32 466 aa11.08□□□□□ -0.64
PGK1-204ENST00000477335 IDI2Q9BXS1 227 aa11.08□□□□□ -0.64
PGK1-204ENST00000477335 WDR90Q96KV7 1748 aa11.08□□□□□ -0.64
PGK1-204ENST00000477335 TCP10L2B9ZVM9 353 aa11.07□□□□□ -0.64
PGK1-204ENST00000477335 PLCG2P16885 1265 aa11.07□□□□□ -0.64
PGK1-204ENST00000477335 PLCD1P51178 756 aa11.07□□□□□ -0.64
PGK1-204ENST00000477335 TCP10Q12799 353 aa11.07□□□□□ -0.64
PGK1-204ENST00000477335 SBK1Q52WX2 424 aa11.07□□□□□ -0.64
PGK1-204ENST00000477335 GIMAP6Q6P9H5 292 aa11.07□□□□□ -0.64
PGK1-204ENST00000477335 STK11IPQ8N1F8 1099 aa11.07□□□□□ -0.64
PGK1-204ENST00000477335 PIP4P2Q8N4L2 257 aa11.07□□□□□ -0.64
PGK1-204ENST00000477335 OSBPL5Q9H0X9 879 aaPredicted RBP11.07□□□□□ -0.64
PGK1-204ENST00000477335 NAPBQ9H115 298 aa11.07□□□□□ -0.64
PGK1-204ENST00000477335 ATP8A2Q9NTI2 1148 aa11.07□□□□□ -0.64
PGK1-204ENST00000477335 PGAP2Q9UHJ9 254 aa11.07□□□□□ -0.64
PGK1-204ENST00000477335 LAMB1P07942 1786 aa11.07□□□□□ -0.64
PGK1-204ENST00000477335 NEDD4P46934 1319 aa11.07□□□□□ -0.64
PGK1-204ENST00000477335 DDTLA6NHG4 134 aaPredicted RBP11.06□□□□□ -0.64
PGK1-204ENST00000477335 H7C1D1 291 aa11.06□□□□□ -0.64
PGK1-204ENST00000477335 CPA1P15085 419 aa11.06□□□□□ -0.64
PGK1-204ENST00000477335 MMP14P50281 582 aa11.06□□□□□ -0.64
PGK1-204ENST00000477335 PPARAQ07869 468 aa11.06□□□□□ -0.64
PGK1-204ENST00000477335 C12orf60Q5U649 245 aa11.06□□□□□ -0.64
PGK1-204ENST00000477335 DPY19L2Q6NUT2 758 aa11.06□□□□□ -0.64
PGK1-204ENST00000477335 DLK2Q6UY11 383 aa11.06□□□□□ -0.64
PGK1-204ENST00000477335 CERS3Q8IU89 383 aa11.06□□□□□ -0.64
PGK1-204ENST00000477335 SLC44A5Q8NCS7 719 aa11.06□□□□□ -0.64
PGK1-204ENST00000477335 DYNLL2Q96FJ2 89 aa11.06□□□□□ -0.64
PGK1-204ENST00000477335 VEZTQ9HBM0 779 aa11.06□□□□□ -0.64
PGK1-204ENST00000477335 ADARB2Q9NS39 739 aaKnown RBP11.06□□□□□ -0.64
PGK1-204ENST00000477335 MCM9Q9NXL9 1143 aa11.06□□□□□ -0.64
PGK1-204ENST00000477335 HACL1Q9UJ83 578 aa11.06□□□□□ -0.64
PGK1-204ENST00000477335 ANAPC4Q9UJX5 808 aa11.06□□□□□ -0.64
PGK1-204ENST00000477335 ATRNL1Q5VV63 1379 aa11.05□□□□□ -0.64
PGK1-204ENST00000477335 ROBO3Q96MS0 1386 aa11.05□□□□□ -0.64
PGK1-204ENST00000477335 MINDY4BA8MYZ0 360 aa11.05□□□□□ -0.64
PGK1-204ENST00000477335 E7EWF7 191 aa11.05□□□□□ -0.64
PGK1-204ENST00000477335 POTEIP0CG38 1075 aa11.05□□□□□ -0.64
PGK1-204ENST00000477335 POTEJP0CG39 1038 aa11.05□□□□□ -0.64
PGK1-204ENST00000477335 EPHX2P34913 555 aa11.05□□□□□ -0.64
PGK1-204ENST00000477335 FXR2P51116 673 aaKnown RBP eCLIP11.05□□□□□ -0.642e-6■■□□□ 14.2
PGK1-204ENST00000477335 TSGA10IPQ3SY00 556 aa11.05□□□□□ -0.64
PGK1-204ENST00000477335 ANGEL2Q5VTE6 544 aaKnown RBP11.05□□□□□ -0.64
PGK1-204ENST00000477335 CHADLQ6NUI6 762 aa11.05□□□□□ -0.64
PGK1-204ENST00000477335 NACAP1Q9BZK3 213 aa11.05□□□□□ -0.64
PGK1-204ENST00000477335 TMEM39BQ9GZU3 492 aa11.05□□□□□ -0.64
PGK1-204ENST00000477335 TAF1DQ9H5J8 278 aaPredicted RBP11.05□□□□□ -0.64
PGK1-204ENST00000477335 DNAJC18Q9H819 358 aa11.05□□□□□ -0.64
PGK1-204ENST00000477335 UPF2Q9HAU5 1272 aaKnown RBP11.05□□□□□ -0.64
PGK1-204ENST00000477335 GGA3Q9NZ52 723 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms