RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 GPATCH3Q96I76 525 aa16.32■□□□□ 0.2
ACTN4-205ENST00000477174 DNAJC2Q99543 621 aaKnown RBP16.32■□□□□ 0.2
ACTN4-205ENST00000477174 PRDM10Q9NQV6 1147 aa16.32■□□□□ 0.2
ACTN4-205ENST00000477174 AATFQ9NY61 560 aaKnown RBP eCLIP16.32■□□□□ 0.2
ACTN4-205ENST00000477174 ZNF112Q9UJU3 913 aa16.32■□□□□ 0.2
ACTN4-205ENST00000477174 AKAP11Q9UKA4 1901 aa16.32■□□□□ 0.2
ACTN4-205ENST00000477174 SREBF2Q12772 1141 aa16.31■□□□□ 0.2
ACTN4-205ENST00000477174 PICALMQ13492 652 aa16.31■□□□□ 0.2
ACTN4-205ENST00000477174 VGLL4Q14135 290 aa16.31■□□□□ 0.2
ACTN4-205ENST00000477174 SLC9C2Q5TAH2 1124 aa16.31■□□□□ 0.2
ACTN4-205ENST00000477174 SH3BP5LQ7L8J4 393 aa16.31■□□□□ 0.2
ACTN4-205ENST00000477174 SH3RF3Q8TEJ3 882 aaPredicted RBP16.31■□□□□ 0.2
ACTN4-205ENST00000477174 WNK4Q96J92 1243 aa16.31■□□□□ 0.2
ACTN4-205ENST00000477174 WRNIP1Q96S55 665 aa16.31■□□□□ 0.2
ACTN4-205ENST00000477174 RWDD1Q9H446 243 aaPredicted RBP16.31■□□□□ 0.2
ACTN4-205ENST00000477174 PAG1Q9NWQ8 432 aa16.31■□□□□ 0.2
ACTN4-205ENST00000477174 SAGE1Q9NXZ1 904 aa16.31■□□□□ 0.2
ACTN4-205ENST00000477174 MYH2Q9UKX2 1941 aa16.31■□□□□ 0.2
ACTN4-205ENST00000477174 DDTLA6NHG4 134 aaPredicted RBP16.3■□□□□ 0.2
ACTN4-205ENST00000477174 MANSC4A6NHS7 340 aaPredicted RBP16.3■□□□□ 0.2
ACTN4-205ENST00000477174 HSPA8P11142 646 aaKnown RBP16.3■□□□□ 0.2
ACTN4-205ENST00000477174 LBX1P52954 281 aa16.3■□□□□ 0.2
ACTN4-205ENST00000477174 EXOC6Q8TAG9 804 aa16.3■□□□□ 0.2
ACTN4-205ENST00000477174 ELP3Q9H9T3 547 aa16.3■□□□□ 0.2
ACTN4-205ENST00000477174 RNF186Q9NXI6 227 aa16.3■□□□□ 0.2
ACTN4-205ENST00000477174 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
ACTN4-205ENST00000477174 THSD7BQ9C0I4 1608 aa16.3■□□□□ 0.2
ACTN4-205ENST00000477174 ATRNL1Q5VV63 1379 aa16.29■□□□□ 0.2
ACTN4-205ENST00000477174 TBC1D12O60347 775 aa16.29■□□□□ 0.2
ACTN4-205ENST00000477174 MKRN3Q13064 507 aaKnown RBP16.29■□□□□ 0.2
ACTN4-205ENST00000477174 ZKSCAN4Q969J2 545 aaPredicted RBP16.29■□□□□ 0.2
ACTN4-205ENST00000477174 OPTNQ96CV9 577 aa16.29■□□□□ 0.2
ACTN4-205ENST00000477174 OSBPL5Q9H0X9 879 aaPredicted RBP16.29■□□□□ 0.2
ACTN4-205ENST00000477174 DHX36Q9H2U1 1008 aaKnown RBP16.29■□□□□ 0.2
ACTN4-205ENST00000477174 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.29■□□□□ 0.2
ACTN4-205ENST00000477174 TRPA1O75762 1119 aa16.28■□□□□ 0.2
ACTN4-205ENST00000477174 PDE6AP16499 860 aa16.28■□□□□ 0.2
ACTN4-205ENST00000477174 COL13A1Q5TAT6 717 aaPredicted RBP16.28■□□□□ 0.2
ACTN4-205ENST00000477174 ANKRD45Q5TZF3 282 aa16.28■□□□□ 0.2
ACTN4-205ENST00000477174 ERO1BQ86YB8 467 aa16.28■□□□□ 0.2
ACTN4-205ENST00000477174 TGFBRAP1Q8WUH2 860 aa16.28■□□□□ 0.2
ACTN4-205ENST00000477174 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.28■□□□□ 0.2
ACTN4-205ENST00000477174 TTC41PQ6P2S7 1318 aa16.27■□□□□ 0.2
ACTN4-205ENST00000477174 SPDYE5A6NIY4 337 aa16.27■□□□□ 0.2
ACTN4-205ENST00000477174 PHF20L1A8MW92 1017 aa16.27■□□□□ 0.2
ACTN4-205ENST00000477174 ALDH1A1P00352 501 aa16.27■□□□□ 0.2
ACTN4-205ENST00000477174 INPP5BP32019 993 aa16.27■□□□□ 0.2
ACTN4-205ENST00000477174 GJA5P36382 358 aa16.27■□□□□ 0.2
ACTN4-205ENST00000477174 DYNLL1P63167 89 aaKnown RBP16.27■□□□□ 0.2
ACTN4-205ENST00000477174 NOL9Q5SY16 702 aaKnown RBP16.27■□□□□ 0.2
ACTN4-205ENST00000477174 MIGA1Q8NAN2 632 aa16.27■□□□□ 0.2
ACTN4-205ENST00000477174 EDC3Q96F86 508 aaKnown RBP16.27■□□□□ 0.2
ACTN4-205ENST00000477174 PI4KBQ9UBF8 816 aa16.27■□□□□ 0.2
ACTN4-205ENST00000477174 SNCAIPQ9Y6H5 919 aa16.27■□□□□ 0.2
ACTN4-205ENST00000477174 MAGEB6P1A0A0J9YX57 407 aa16.26■□□□□ 0.19
ACTN4-205ENST00000477174 TCRBV5S4A2TA0A5A2 114 aa16.26■□□□□ 0.19
ACTN4-205ENST00000477174 TESPA1A2RU30 521 aaPredicted RBP16.26■□□□□ 0.19
ACTN4-205ENST00000477174 ERC2O15083 957 aa16.26■□□□□ 0.19
ACTN4-205ENST00000477174 GTF2A2P52657 109 aa16.26■□□□□ 0.19
ACTN4-205ENST00000477174 PPATQ06203 517 aa16.26■□□□□ 0.19
ACTN4-205ENST00000477174 OTUD7BQ6GQQ9 843 aa16.26■□□□□ 0.19
ACTN4-205ENST00000477174 ZSCAN25Q6NSZ9 544 aa16.26■□□□□ 0.19
ACTN4-205ENST00000477174 FOXP4Q8IVH2 680 aaPredicted RBP16.26■□□□□ 0.19
ACTN4-205ENST00000477174 RIOK1Q9BRS2 568 aaKnown RBP16.26■□□□□ 0.19
ACTN4-205ENST00000477174 COL2A1P02458 1487 aaPredicted RBP16.26■□□□□ 0.19
ACTN4-205ENST00000477174 ZNF532Q9HCE3 1301 aa16.25■□□□□ 0.19
ACTN4-205ENST00000477174 CTNND1O60716 968 aaKnown RBP16.25■□□□□ 0.19
ACTN4-205ENST00000477174 GLRX3O76003 335 aaKnown RBP16.25■□□□□ 0.19
ACTN4-205ENST00000477174 ADD2P35612 726 aa16.25■□□□□ 0.19
ACTN4-205ENST00000477174 UBE3CQ15386 1083 aa16.25■□□□□ 0.19
ACTN4-205ENST00000477174 IFNL1Q8IU54 200 aa16.25■□□□□ 0.19
ACTN4-205ENST00000477174 MAPKAPK5Q8IW41 473 aa16.25■□□□□ 0.19
ACTN4-205ENST00000477174 SMC5Q8IY18 1101 aa16.25■□□□□ 0.19
ACTN4-205ENST00000477174 OTUD5Q96G74 571 aa16.25■□□□□ 0.19
ACTN4-205ENST00000477174 MS4A4AQ96JQ5 239 aa16.25■□□□□ 0.19
ACTN4-205ENST00000477174 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.25■□□□□ 0.19
ACTN4-205ENST00000477174 HERC5Q9UII4 1024 aaKnown RBP16.25■□□□□ 0.19
ACTN4-205ENST00000477174 TSKSQ9UJT2 592 aa16.25■□□□□ 0.19
ACTN4-205ENST00000477174 FLT1P17948 1338 aa16.24■□□□□ 0.19
ACTN4-205ENST00000477174 IGHDP01880 384 aa16.24■□□□□ 0.19
ACTN4-205ENST00000477174 MX1P20591 662 aa16.24■□□□□ 0.19
ACTN4-205ENST00000477174 USP5P45974 858 aa16.24■□□□□ 0.19
ACTN4-205ENST00000477174 PPIL2Q13356 520 aa16.24■□□□□ 0.19
ACTN4-205ENST00000477174 METTL16Q86W50 562 aaKnown RBP16.24■□□□□ 0.19
ACTN4-205ENST00000477174 CNKSR2Q8WXI2 1034 aa16.24■□□□□ 0.19
ACTN4-205ENST00000477174 CFHR5Q9BXR6 569 aa16.24■□□□□ 0.19
ACTN4-205ENST00000477174 IRF6O14896 467 aa16.23■□□□□ 0.19
ACTN4-205ENST00000477174 SNAPC2Q13487 334 aa16.23■□□□□ 0.19
ACTN4-205ENST00000477174 TSHZ3Q63HK5 1081 aa16.23■□□□□ 0.19
ACTN4-205ENST00000477174 SCYL3Q8IZE3 742 aa16.23■□□□□ 0.19
ACTN4-205ENST00000477174 KBTBD3Q8NAB2 608 aa16.23■□□□□ 0.19
ACTN4-205ENST00000477174 OTUD7AQ8TE49 926 aaPredicted RBP16.23■□□□□ 0.19
ACTN4-205ENST00000477174 CRNKL1Q9BZJ0 848 aaKnown RBP16.23■□□□□ 0.19
ACTN4-205ENST00000477174 PICK1Q9NRD5 415 aa16.23■□□□□ 0.19
ACTN4-205ENST00000477174 STAP2Q9UGK3 403 aa16.23■□□□□ 0.19
ACTN4-205ENST00000477174 PALD1Q9ULE6 856 aa16.23■□□□□ 0.19
ACTN4-205ENST00000477174 CETPP11597 493 aa16.22■□□□□ 0.19
ACTN4-205ENST00000477174 LRRFIP1Q32MZ4 808 aaKnown RBP16.22■□□□□ 0.19
ACTN4-205ENST00000477174 NOM1Q5C9Z4 860 aaKnown RBP16.22■□□□□ 0.19
ACTN4-205ENST00000477174 PI4K2BQ8TCG2 481 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms