RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 CDK5RAP2Q96SN8 1893 aa15.16■□□□□ 0.02
APTX-220ENST00000476858 TCRBV5S4A2TA0A5A2 114 aa15.15■□□□□ 0.02
APTX-220ENST00000476858 SLC10A3P09131 477 aa15.15■□□□□ 0.02
APTX-220ENST00000476858 PDE6AP16499 860 aa15.15■□□□□ 0.02
APTX-220ENST00000476858 TNFAIP1Q13829 316 aa15.15■□□□□ 0.02
APTX-220ENST00000476858 FKBP1CQ5VVH2 108 aa15.15■□□□□ 0.02
APTX-220ENST00000476858 FAM151AQ8WW52 585 aa15.15■□□□□ 0.02
APTX-220ENST00000476858 HHIPL1Q96JK4 782 aa15.15■□□□□ 0.02
APTX-220ENST00000476858 IDI2Q9BXS1 227 aa15.15■□□□□ 0.02
APTX-220ENST00000476858 LNPKQ9C0E8 428 aa15.15■□□□□ 0.02
APTX-220ENST00000476858 ECHDC1Q9NTX5 307 aa15.15■□□□□ 0.02
APTX-220ENST00000476858 PAG1Q9NWQ8 432 aa15.15■□□□□ 0.02
APTX-220ENST00000476858 TMOD2Q9NZR1 351 aa15.15■□□□□ 0.02
APTX-220ENST00000476858 FAM196BA6NMK8 535 aa15.14■□□□□ 0.01
APTX-220ENST00000476858 HSPA1AP0DMV8 641 aaKnown RBP15.14■□□□□ 0.01
APTX-220ENST00000476858 HSPA1BP0DMV9 641 aaKnown RBP15.14■□□□□ 0.01
APTX-220ENST00000476858 TNNI2P48788 182 aa15.14■□□□□ 0.01
APTX-220ENST00000476858 GSTO1P78417 241 aa15.14■□□□□ 0.01
APTX-220ENST00000476858 MAP3K11Q16584 847 aa15.14■□□□□ 0.01
APTX-220ENST00000476858 SLC4A8Q2Y0W8 1093 aa15.14■□□□□ 0.01
APTX-220ENST00000476858 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.14■□□□□ 0.01
APTX-220ENST00000476858 SIPA1L1O43166 1804 aa15.14■□□□□ 0.01
APTX-220ENST00000476858 ZNF532Q9HCE3 1301 aa15.14■□□□□ 0.01
APTX-220ENST00000476858 RPAP1Q9BWH6 1393 aaPredicted RBP15.13■□□□□ 0.01
APTX-220ENST00000476858 LDHCP07864 332 aa15.13■□□□□ 0.01
APTX-220ENST00000476858 INPP5BP32019 993 aa15.13■□□□□ 0.01
APTX-220ENST00000476858 NF2P35240 595 aa15.13■□□□□ 0.01
APTX-220ENST00000476858 PPP4CP60510 307 aa15.13■□□□□ 0.01
APTX-220ENST00000476858 FKBP1BP68106 108 aa15.13■□□□□ 0.01
APTX-220ENST00000476858 KIF23Q02241 960 aaPredicted RBP15.13■□□□□ 0.01
APTX-220ENST00000476858 SUPT20HL1Q3ZLR7 823 aa15.13■□□□□ 0.01
APTX-220ENST00000476858 MAPKAPK5Q8IW41 473 aa15.13■□□□□ 0.01
APTX-220ENST00000476858 TEX11Q8IYF3 940 aa15.13■□□□□ 0.01
APTX-220ENST00000476858 RIOK1Q9BRS2 568 aaKnown RBP15.13■□□□□ 0.01
APTX-220ENST00000476858 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.13■□□□□ 0.01
APTX-220ENST00000476858 TSKSQ9UJT2 592 aa15.13■□□□□ 0.01
APTX-220ENST00000476858 FOXN1O15353 648 aa15.12■□□□□ 0.01
APTX-220ENST00000476858 RRP1BQ14684 758 aaKnown RBP15.12■□□□□ 0.01
APTX-220ENST00000476858 SLC9C2Q5TAH2 1124 aa15.12■□□□□ 0.01
APTX-220ENST00000476858 ARMC9Q7Z3E5 817 aa15.12■□□□□ 0.01
APTX-220ENST00000476858 SLF2Q8IX21 1173 aa15.12■□□□□ 0.01
APTX-220ENST00000476858 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.12■□□□□ 0.01
APTX-220ENST00000476858 TGFBRAP1Q8WUH2 860 aa15.12■□□□□ 0.01
APTX-220ENST00000476858 ZKSCAN4Q969J2 545 aaPredicted RBP15.12■□□□□ 0.01
APTX-220ENST00000476858 GCC1Q96CN9 775 aa15.12■□□□□ 0.01
APTX-220ENST00000476858 RWDD1Q9H446 243 aaPredicted RBP15.12■□□□□ 0.01
APTX-220ENST00000476858 ELP3Q9H9T3 547 aa15.12■□□□□ 0.01
APTX-220ENST00000476858 FOCADQ5VW36 1801 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 SMIM22K7EJ46 135 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 ENTPD3O75355 529 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 MX1P20591 662 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 PDE4AP27815 886 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 ADD2P35612 726 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 ECE1P42892 770 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 MAP3K12Q12852 859 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 AAMPQ13685 434 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 VGLL4Q14135 290 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 SHROOM1Q2M3G4 852 aaPredicted RBP15.11■□□□□ 0.01
APTX-220ENST00000476858 SKAP1Q86WV1 359 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 LCORLQ8N3X6 602 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 OSBPL5Q9H0X9 879 aaPredicted RBP15.11■□□□□ 0.01
APTX-220ENST00000476858 WBP1LQ9NX94 342 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 SAP30BPQ9UHR5 308 aaKnown RBP15.11■□□□□ 0.01
APTX-220ENST00000476858 SNCAIPQ9Y6H5 919 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 FLT1P17948 1338 aa15.11■□□□□ 0.01
APTX-220ENST00000476858 PRKAB2O43741 272 aa15.1■□□□□ 0.01
APTX-220ENST00000476858 PPP1R12BO60237 982 aaPredicted RBP15.1■□□□□ 0.01
APTX-220ENST00000476858 NUCB1Q02818 461 aa15.1■□□□□ 0.01
APTX-220ENST00000476858 CCDC84Q86UT8 332 aaPredicted RBP15.1■□□□□ 0.01
APTX-220ENST00000476858 CSRNP1Q96S65 589 aa15.1■□□□□ 0.01
APTX-220ENST00000476858 ARMT1Q9H993 441 aa15.1■□□□□ 0.01
APTX-220ENST00000476858 DDX60LQ5H9U9 1706 aaKnown RBP15.09■□□□□ 0.01
APTX-220ENST00000476858 PHF20L1A8MW92 1017 aa15.09■□□□□ 0.01
APTX-220ENST00000476858 PDE1AP54750 535 aa15.09■□□□□ 0.01
APTX-220ENST00000476858 JAG1P78504 1218 aa15.09■□□□□ 0.01
APTX-220ENST00000476858 TTF1Q15361 905 aaPredicted RBP15.09■□□□□ 0.01
APTX-220ENST00000476858 SPRYD7Q5W111 196 aa15.09■□□□□ 0.01
APTX-220ENST00000476858 CHD1LQ86WJ1 897 aa15.09■□□□□ 0.01
APTX-220ENST00000476858 ZSCAN29Q8IWY8 852 aaPredicted RBP15.09■□□□□ 0.01
APTX-220ENST00000476858 WNK4Q96J92 1243 aa15.09■□□□□ 0.01
APTX-220ENST00000476858 WRNIP1Q96S55 665 aa15.09■□□□□ 0.01
APTX-220ENST00000476858 PUS7LQ9H0K6 701 aaKnown RBP15.09■□□□□ 0.01
APTX-220ENST00000476858 DNAJC18Q9H819 358 aa15.09■□□□□ 0.01
APTX-220ENST00000476858 STAP2Q9UGK3 403 aa15.09■□□□□ 0.01
APTX-220ENST00000476858 PALD1Q9ULE6 856 aa15.09■□□□□ 0.01
APTX-220ENST00000476858 AK9Q5TCS8 1911 aa15.08■□□□□ 0
APTX-220ENST00000476858 MAGEB6P1A0A0J9YX57 407 aa15.08■□□□□ 0
APTX-220ENST00000476858 MBD4O95243 580 aa15.08■□□□□ 0
APTX-220ENST00000476858 IREB2P48200 963 aaKnown RBP15.08■□□□□ 0
APTX-220ENST00000476858 MAP3K9P80192 1104 aa15.08■□□□□ 0
APTX-220ENST00000476858 NOGQ13253 232 aa15.08■□□□□ 0
APTX-220ENST00000476858 PLEKHM2Q8IWE5 1019 aa15.08■□□□□ 0
APTX-220ENST00000476858 SDR42E1Q8WUS8 393 aa15.08■□□□□ 0
APTX-220ENST00000476858 CCDC102AQ96A19 550 aa15.08■□□□□ 0
APTX-220ENST00000476858 SLC10A4Q96EP9 437 aa15.08■□□□□ 0
APTX-220ENST00000476858 SEC62Q99442 399 aaKnown RBP15.08■□□□□ 0
APTX-220ENST00000476858 ZNF112Q9UJU3 913 aa15.08■□□□□ 0
APTX-220ENST00000476858 TTC41PQ6P2S7 1318 aa15.08■□□□□ 0
APTX-220ENST00000476858 MYH7P12883 1935 aa15.07■□□□□ 0
APTX-220ENST00000476858 BAG3O95817 575 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms