RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 SH3TC2Q8TF17 1288 aa16.27■□□□□ 0.2
MRPL55-228ENST00000476267 TRIM47Q96LD4 638 aa16.27■□□□□ 0.2
MRPL55-228ENST00000476267 TNNQ9UQP3 1299 aa16.27■□□□□ 0.2
MRPL55-228ENST00000476267 MAST2Q6P0Q8 1798 aa16.27■□□□□ 0.2
MRPL55-228ENST00000476267 LOC285556D6RIA3 1793 aa16.26■□□□□ 0.19
MRPL55-228ENST00000476267 A0A0G2JLL6 359 aaPredicted RBP16.26■□□□□ 0.19
MRPL55-228ENST00000476267 CXCL11O14625 94 aa16.26■□□□□ 0.19
MRPL55-228ENST00000476267 BCRP11274 1271 aa16.26■□□□□ 0.19
MRPL55-228ENST00000476267 TRIM27P14373 513 aa16.26■□□□□ 0.19
MRPL55-228ENST00000476267 PTPRAP18433 802 aa16.26■□□□□ 0.19
MRPL55-228ENST00000476267 RHBDL3P58872 404 aa16.26■□□□□ 0.19
MRPL55-228ENST00000476267 KIF22Q14807 665 aa16.26■□□□□ 0.19
MRPL55-228ENST00000476267 PRRT2Q7Z6L0 340 aaPredicted RBP16.26■□□□□ 0.19
MRPL55-228ENST00000476267 TMEM106CQ9BVX2 250 aa16.26■□□□□ 0.19
MRPL55-228ENST00000476267 SRRDQ9UH36 339 aa16.26■□□□□ 0.19
MRPL55-228ENST00000476267 COL2A1P02458 1487 aaPredicted RBP16.26■□□□□ 0.19
MRPL55-228ENST00000476267 SIPA1L1O43166 1804 aa16.26■□□□□ 0.19
MRPL55-228ENST00000476267 ATAD5Q96QE3 1844 aa16.26■□□□□ 0.19
MRPL55-228ENST00000476267 GPR75-ASB3A0A0A6YYF3 556 aa16.25■□□□□ 0.19
MRPL55-228ENST00000476267 BTDP43251 543 aa16.25■□□□□ 0.19
MRPL55-228ENST00000476267 MECOMQ03112 1051 aa16.25■□□□□ 0.19
MRPL55-228ENST00000476267 MVPQ14764 893 aaKnown RBP16.25■□□□□ 0.19
MRPL55-228ENST00000476267 DZIP1Q86YF9 867 aaKnown RBP16.25■□□□□ 0.19
MRPL55-228ENST00000476267 GCC1Q96CN9 775 aa16.25■□□□□ 0.19
MRPL55-228ENST00000476267 HMG20BQ9P0W2 317 aa16.25■□□□□ 0.19
MRPL55-228ENST00000476267 ABCF2Q9UG63 623 aa16.25■□□□□ 0.19
MRPL55-228ENST00000476267 AKAP2Q9Y2D5 859 aa16.25■□□□□ 0.19
MRPL55-228ENST00000476267 AFG3L2Q9Y4W6 797 aa16.25■□□□□ 0.19
MRPL55-228ENST00000476267 NPM3O75607 178 aaKnown RBP16.24■□□□□ 0.19
MRPL55-228ENST00000476267 OSBPP22059 807 aa16.24■□□□□ 0.19
MRPL55-228ENST00000476267 ARID4AP29374 1257 aaPredicted RBP16.24■□□□□ 0.19
MRPL55-228ENST00000476267 PSMC4P43686 418 aa16.24■□□□□ 0.19
MRPL55-228ENST00000476267 PI16Q6UXB8 463 aa16.24■□□□□ 0.19
MRPL55-228ENST00000476267 FOCADQ5VW36 1801 aa16.24■□□□□ 0.19
MRPL55-228ENST00000476267 CDK5RAP2Q96SN8 1893 aa16.23■□□□□ 0.19
MRPL55-228ENST00000476267 PNMA6EA0A0J9YXQ4 647 aa16.23■□□□□ 0.19
MRPL55-228ENST00000476267 CYP2C8P10632 490 aa16.23■□□□□ 0.19
MRPL55-228ENST00000476267 HABP4Q5JVS0 413 aaKnown RBP16.23■□□□□ 0.19
MRPL55-228ENST00000476267 SPTY2D1Q68D10 685 aaPredicted RBP16.23■□□□□ 0.19
MRPL55-228ENST00000476267 ATF7IPQ6VMQ6 1270 aa16.23■□□□□ 0.19
MRPL55-228ENST00000476267 SLF2Q8IX21 1173 aa16.23■□□□□ 0.19
MRPL55-228ENST00000476267 NSUN4Q96CB9 384 aaKnown RBP16.23■□□□□ 0.19
MRPL55-228ENST00000476267 SHISA4Q96DD7 197 aa16.23■□□□□ 0.19
MRPL55-228ENST00000476267 PARK7Q99497 189 aaKnown RBP16.23■□□□□ 0.19
MRPL55-228ENST00000476267 ZHX2Q9Y6X8 837 aa16.23■□□□□ 0.19
MRPL55-228ENST00000476267 KIAA0100Q14667 2235 aaKnown RBP16.23■□□□□ 0.19
MRPL55-228ENST00000476267 TBC1D12O60347 775 aa16.22■□□□□ 0.19
MRPL55-228ENST00000476267 CTNND1O60716 968 aaKnown RBP16.22■□□□□ 0.19
MRPL55-228ENST00000476267 BCAR3O75815 825 aa16.22■□□□□ 0.19
MRPL55-228ENST00000476267 MTFR1Q15390 333 aa16.22■□□□□ 0.19
MRPL55-228ENST00000476267 SLC4A8Q2Y0W8 1093 aa16.22■□□□□ 0.19
MRPL55-228ENST00000476267 ERICH6Q7L0X2 663 aa16.22■□□□□ 0.19
MRPL55-228ENST00000476267 SPATA5Q8NB90 893 aa16.22■□□□□ 0.19
MRPL55-228ENST00000476267 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.22■□□□□ 0.19
MRPL55-228ENST00000476267 SLC45A1Q9Y2W3 748 aa16.22■□□□□ 0.19
MRPL55-228ENST00000476267 MYPNQ86TC9 1320 aa16.21■□□□□ 0.19
MRPL55-228ENST00000476267 MYCP01106 439 aaPredicted RBP16.21■□□□□ 0.19
MRPL55-228ENST00000476267 GNAI2P04899 355 aa16.21■□□□□ 0.19
MRPL55-228ENST00000476267 MCAMP43121 646 aa16.21■□□□□ 0.19
MRPL55-228ENST00000476267 PICALMQ13492 652 aa16.21■□□□□ 0.19
MRPL55-228ENST00000476267 FASTKD5Q7L8L6 764 aaKnown RBP16.21■□□□□ 0.19
MRPL55-228ENST00000476267 PICK1Q9NRD5 415 aa16.21■□□□□ 0.19
MRPL55-228ENST00000476267 ECM2O94769 699 aaPredicted RBP16.2■□□□□ 0.18
MRPL55-228ENST00000476267 MAP4K4O95819 1239 aaPredicted RBP16.2■□□□□ 0.18
MRPL55-228ENST00000476267 GRK4P32298 578 aa16.2■□□□□ 0.18
MRPL55-228ENST00000476267 PRKCZQ05513 592 aa16.2■□□□□ 0.18
MRPL55-228ENST00000476267 TBC1D9Q6ZT07 1266 aa16.2■□□□□ 0.18
MRPL55-228ENST00000476267 UBE2Q1Q7Z7E8 422 aa16.2■□□□□ 0.18
MRPL55-228ENST00000476267 ZSCAN29Q8IWY8 852 aaPredicted RBP16.2■□□□□ 0.18
MRPL55-228ENST00000476267 NEUROD6Q96NK8 337 aa16.2■□□□□ 0.18
MRPL55-228ENST00000476267 MYO5AQ9Y4I1 1855 aaKnown RBP16.2■□□□□ 0.18
MRPL55-228ENST00000476267 IPO8O15397 1037 aaKnown RBP16.19■□□□□ 0.18
MRPL55-228ENST00000476267 FMNL1O95466 1100 aaPredicted RBP16.19■□□□□ 0.18
MRPL55-228ENST00000476267 HOXD10P28358 340 aa16.19■□□□□ 0.18
MRPL55-228ENST00000476267 POLA2Q14181 598 aa16.19■□□□□ 0.18
MRPL55-228ENST00000476267 CCDC84Q86UT8 332 aaPredicted RBP16.19■□□□□ 0.18
MRPL55-228ENST00000476267 OSBPL5Q9H0X9 879 aaPredicted RBP16.19■□□□□ 0.18
MRPL55-228ENST00000476267 GABRQQ9UN88 632 aa16.19■□□□□ 0.18
MRPL55-228ENST00000476267 FAM196BA6NMK8 535 aa16.18■□□□□ 0.18
MRPL55-228ENST00000476267 FCGRTP55899 365 aa16.18■□□□□ 0.18
MRPL55-228ENST00000476267 RRP1BQ14684 758 aaKnown RBP16.18■□□□□ 0.18
MRPL55-228ENST00000476267 TMEM57Q8N5G2 664 aa16.18■□□□□ 0.18
MRPL55-228ENST00000476267 RAET1EQ8TD07 263 aa16.18■□□□□ 0.18
MRPL55-228ENST00000476267 CLUAP1Q96AJ1 413 aa16.18■□□□□ 0.18
MRPL55-228ENST00000476267 AGTPBP1Q9UPW5 1226 aa16.18■□□□□ 0.18
MRPL55-228ENST00000476267 TRIM75PA6NK02 468 aa16.17■□□□□ 0.18
MRPL55-228ENST00000476267 GJA8P48165 433 aa16.17■□□□□ 0.18
MRPL55-228ENST00000476267 GSTO1P78417 241 aa16.17■□□□□ 0.18
MRPL55-228ENST00000476267 TREML2Q5T2D2 321 aa16.17■□□□□ 0.18
MRPL55-228ENST00000476267 GADL1Q6ZQY3 521 aa16.17■□□□□ 0.18
MRPL55-228ENST00000476267 SSH3Q8TE77 659 aa16.17■□□□□ 0.18
MRPL55-228ENST00000476267 FRAT1Q92837 279 aaPredicted RBP16.17■□□□□ 0.18
MRPL55-228ENST00000476267 GPR108Q9NPR9 543 aa16.17■□□□□ 0.18
MRPL55-228ENST00000476267 LDHCP07864 332 aa16.16■□□□□ 0.18
MRPL55-228ENST00000476267 GJB1P08034 283 aa16.16■□□□□ 0.18
MRPL55-228ENST00000476267 UQCRFS1P1P0C7P4 283 aa16.16■□□□□ 0.18
MRPL55-228ENST00000476267 CCL5P13501 91 aa16.16■□□□□ 0.18
MRPL55-228ENST00000476267 G3BP1Q13283 466 aaKnown RBP eCLIP16.16■□□□□ 0.18
MRPL55-228ENST00000476267 PROCA1Q8NCQ7 364 aaPredicted RBP16.16■□□□□ 0.18
MRPL55-228ENST00000476267 SLAIN1Q8ND83 568 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms