RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ZNF274Q96GC6 653 aaPredicted RBP8.05□□□□□ -1.12
UBR4-212ENST00000475973 NEK1Q96PY6 1258 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 BPIFA3Q9BQP9 254 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 NYXQ9GZU5 481 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 TAOK3Q9H2K8 898 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 DACT1Q9NYF0 836 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 FAM13BQ9NYF5 915 aa8.05□□□□□ -1.12
UBR4-212ENST00000475973 LTBP3Q9NS15 1303 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 FAM237AA0A1B0GTK4 181 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 NBPF26B4DH59 902 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 ERVV-1B6SEH8 477 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 NFKBIEO00221 500 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 C21orf2O43822 256 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 PTMAP06454 111 aaKnown RBP8.04□□□□□ -1.12
UBR4-212ENST00000475973 SRGNP10124 158 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 NPR1P16066 1061 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 FSTL1Q12841 308 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 CCDC93Q567U6 631 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 ZMYM1Q5SVZ6 1142 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 ZSCAN25Q6NSZ9 544 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 NBPF10Q6P3W6 841 aaKnown RBP8.04□□□□□ -1.12
UBR4-212ENST00000475973 NYAP1Q6ZVC0 841 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 STOX1Q6ZVD7 989 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 ATG9AQ7Z3C6 839 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 CCDC24Q8N4L8 307 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 NBPF15Q8N660 670 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 ZDHHC16Q969W1 377 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 FEZ1Q99689 392 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 CCDC8Q9H0W5 538 aaPredicted RBP8.04□□□□□ -1.12
UBR4-212ENST00000475973 OSBPL5Q9H0X9 879 aaPredicted RBP8.04□□□□□ -1.12
UBR4-212ENST00000475973 GPCPD1Q9NPB8 672 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 HELLSQ9NRZ9 838 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 LAMB4A4D0S4 1761 aa8.04□□□□□ -1.12
UBR4-212ENST00000475973 MAP3K15Q6ZN16 1313 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 MYH15Q9Y2K3 1946 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 ABCC12Q96J65 1359 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 A0A1W2PQ27 194 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 A0A1W2PQ64 194 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 A0A1W2PQD8 194 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 GLTPD2A6NH11 291 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 SMTNL1A8MU46 457 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 NR1I2O75469 434 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 OATP04181 439 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 POTEJP0CG39 1038 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 MYL6BP14649 208 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 HOXB3P14651 431 aaPredicted RBP8.03□□□□□ -1.12
UBR4-212ENST00000475973 FOXO4P98177 505 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 DMTNQ08495 405 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 SCRN1Q12765 414 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 DOK7Q18PE1 504 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 ERFEQ4G0M1 354 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 MCMDC2Q4G0Z9 681 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 FAM173BQ6P4H8 233 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 DHX32Q7L7V1 743 aaKnown RBP8.03□□□□□ -1.12
UBR4-212ENST00000475973 SMC1BQ8NDV3 1235 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 PKNOX2Q96KN3 472 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 SPATA32Q96LK8 384 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 BOLA2Q9H3K6 86 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 CFAP45Q9UL16 551 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 PAXBP1Q9Y5B6 917 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 WDR19Q8NEZ3 1342 aa8.03□□□□□ -1.12
UBR4-212ENST00000475973 ARFGEF2Q9Y6D5 1785 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 ARFGEF1Q9Y6D6 1849 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 VPS37CA5D8V6 355 aaPredicted RBP8.02□□□□□ -1.13
UBR4-212ENST00000475973 FAM177BA6PVY3 158 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 FOXP2O15409 715 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 JAK2O60674 1132 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 CIAO1O76071 339 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 VEGFAP15692 232 aaPredicted RBP8.02□□□□□ -1.13
UBR4-212ENST00000475973 PTGS1P23219 599 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 MDM2Q00987 491 aaPredicted RBP8.02□□□□□ -1.13
UBR4-212ENST00000475973 NCBP1Q09161 790 aaKnown RBP8.02□□□□□ -1.13
UBR4-212ENST00000475973 OS9Q13438 667 aaPredicted RBP8.02□□□□□ -1.13
UBR4-212ENST00000475973 CCDC144BQ3MJ40 725 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 FOXD4L6Q3SYB3 417 aaPredicted RBP8.02□□□□□ -1.13
UBR4-212ENST00000475973 ANO6Q4KMQ2 910 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 ARSIQ5FYB1 569 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 FOXD4L3Q6VB84 417 aaPredicted RBP8.02□□□□□ -1.13
UBR4-212ENST00000475973 CCDC186Q7Z3E2 898 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 METTL3Q86U44 580 aaKnown RBP8.02□□□□□ -1.13
UBR4-212ENST00000475973 LUZP1Q86V48 1076 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 CCDC144CPQ8IYA2 1237 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 FMR1NBQ8N0W7 255 aaPredicted RBP8.02□□□□□ -1.13
UBR4-212ENST00000475973 C17orf53Q8N3J3 647 aaPredicted RBP8.02□□□□□ -1.13
UBR4-212ENST00000475973 ZNF454Q8N9F8 522 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 TTC13Q8NBP0 860 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 CACTINQ8WUQ7 758 aaKnown RBP8.02□□□□□ -1.13
UBR4-212ENST00000475973 BRF1Q92994 677 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 CHMP4CQ96CF2 233 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 FSD1Q9BTV5 496 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 GTPBP4Q9BZE4 634 aaKnown RBP8.02□□□□□ -1.13
UBR4-212ENST00000475973 TNMDQ9H2S6 317 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 ZBTB3Q9H5J0 574 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 RRAGCQ9HB90 399 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 BRCA1P38398 1863 aaKnown RBP8.02□□□□□ -1.13
UBR4-212ENST00000475973 BCORQ6W2J9 1755 aa8.02□□□□□ -1.13
UBR4-212ENST00000475973 NUDT7P0C024 238 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 FDPSP14324 419 aaKnown RBP8.01□□□□□ -1.13
UBR4-212ENST00000475973 ALDH1B1P30837 517 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 SSTR3P32745 418 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms