RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 COLQQ9Y215 455 aaPredicted RBP13.97□□□□□ -0.17
NUDCD3-206ENST00000475952 RFX7Q2KHR2 1363 aa13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 IGF2BP3O00425 579 aaKnown RBP eCLIP13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 BTDP43251 543 aa13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 NFIAQ12857 509 aa13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 VGLL4Q14135 290 aa13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 PDE3AQ14432 1141 aa13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 PI16Q6UXB8 463 aa13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 RPAP2Q8IXW5 612 aaPredicted RBP13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 OPTNQ96CV9 577 aa13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 ZNF512BQ96KM6 892 aaPredicted RBP13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 WRNIP1Q96S55 665 aa13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 ZNF341Q9BYN7 854 aa13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 RAI14Q9P0K7 980 aa13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 EXOC6BQ9Y2D4 811 aa13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 PTPN22Q9Y2R2 807 aa13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 ZSWIM8A7E2V4 1837 aa13.96□□□□□ -0.17
NUDCD3-206ENST00000475952 LDHCP07864 332 aa13.95□□□□□ -0.18
NUDCD3-206ENST00000475952 CAP1Q01518 475 aa13.95□□□□□ -0.18
NUDCD3-206ENST00000475952 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.95□□□□□ -0.18
NUDCD3-206ENST00000475952 CD99L2Q8TCZ2 262 aa13.95□□□□□ -0.18
NUDCD3-206ENST00000475952 NSUN4Q96CB9 384 aaKnown RBP13.95□□□□□ -0.18
NUDCD3-206ENST00000475952 FAM163AQ96GL9 167 aaPredicted RBP13.95□□□□□ -0.18
NUDCD3-206ENST00000475952 IDI2Q9BXS1 227 aa13.95□□□□□ -0.18
NUDCD3-206ENST00000475952 ZBTB40Q9NUA8 1239 aa13.95□□□□□ -0.18
NUDCD3-206ENST00000475952 LRP2BPQ9P2M1 347 aa13.95□□□□□ -0.18
NUDCD3-206ENST00000475952 DBNLQ9UJU6 430 aaKnown RBP13.95□□□□□ -0.18
NUDCD3-206ENST00000475952 MGAMO43451 1857 aa13.95□□□□□ -0.18
NUDCD3-206ENST00000475952 ENTPD3O75355 529 aa13.94□□□□□ -0.18
NUDCD3-206ENST00000475952 RGS3P49796 1198 aa13.94□□□□□ -0.18
NUDCD3-206ENST00000475952 OTUD7BQ6GQQ9 843 aa13.94□□□□□ -0.18
NUDCD3-206ENST00000475952 TBC1D9Q6ZT07 1266 aa13.94□□□□□ -0.18
NUDCD3-206ENST00000475952 ERO1AQ96HE7 468 aa13.94□□□□□ -0.18
NUDCD3-206ENST00000475952 NOL10Q9BSC4 688 aaKnown RBP13.94□□□□□ -0.18
NUDCD3-206ENST00000475952 FAM198AQ9UFP1 575 aa13.94□□□□□ -0.18
NUDCD3-206ENST00000475952 COL2A1P02458 1487 aaPredicted RBP13.93□□□□□ -0.18
NUDCD3-206ENST00000475952 GPR75-ASB3A0A0A6YYF3 556 aa13.93□□□□□ -0.18
NUDCD3-206ENST00000475952 SPDYE5A6NIY4 337 aa13.93□□□□□ -0.18
NUDCD3-206ENST00000475952 IGSF3O75054 1194 aa13.93□□□□□ -0.18
NUDCD3-206ENST00000475952 MAP4K4O95819 1239 aaPredicted RBP13.93□□□□□ -0.18
NUDCD3-206ENST00000475952 GJA5P36382 358 aa13.93□□□□□ -0.18
NUDCD3-206ENST00000475952 CRHR2Q13324 411 aa13.93□□□□□ -0.18
NUDCD3-206ENST00000475952 PICALMQ13492 652 aa13.93□□□□□ -0.18
NUDCD3-206ENST00000475952 AACSQ86V21 672 aa13.93□□□□□ -0.18
NUDCD3-206ENST00000475952 EAF2Q96CJ1 260 aaPredicted RBP13.93□□□□□ -0.18
NUDCD3-206ENST00000475952 OTUD5Q96G74 571 aa13.93□□□□□ -0.18
NUDCD3-206ENST00000475952 CCDC8Q9H0W5 538 aaPredicted RBP13.93□□□□□ -0.18
NUDCD3-206ENST00000475952 SNRKQ9NRH2 765 aa13.93□□□□□ -0.18
NUDCD3-206ENST00000475952 TLR7Q9NYK1 1049 aaKnown RBP13.93□□□□□ -0.18
NUDCD3-206ENST00000475952 WDHD1O75717 1129 aaPredicted RBP13.92□□□□□ -0.18
NUDCD3-206ENST00000475952 GTF2A2P52657 109 aa13.92□□□□□ -0.18
NUDCD3-206ENST00000475952 MIGA2Q7L4E1 593 aa13.92□□□□□ -0.18
NUDCD3-206ENST00000475952 ERO1BQ86YB8 467 aa13.92□□□□□ -0.18
NUDCD3-206ENST00000475952 ZSCAN29Q8IWY8 852 aaPredicted RBP13.92□□□□□ -0.18
NUDCD3-206ENST00000475952 RHPN1Q8TCX5 695 aa13.92□□□□□ -0.18
NUDCD3-206ENST00000475952 ZNF384Q8TF68 577 aa13.92□□□□□ -0.18
NUDCD3-206ENST00000475952 KIF1BPQ96EK5 621 aa13.92□□□□□ -0.18
NUDCD3-206ENST00000475952 ZNF333Q96JL9 665 aa13.92□□□□□ -0.18
NUDCD3-206ENST00000475952 EFCC1Q9HA90 598 aa13.92□□□□□ -0.18
NUDCD3-206ENST00000475952 SNCAIPQ9Y6H5 919 aa13.92□□□□□ -0.18
NUDCD3-206ENST00000475952 DDX60LQ5H9U9 1706 aaKnown RBP13.92□□□□□ -0.18
NUDCD3-206ENST00000475952 LOC285556D6RIA3 1793 aa13.91□□□□□ -0.18
NUDCD3-206ENST00000475952 TESPA1A2RU30 521 aaPredicted RBP13.91□□□□□ -0.18
NUDCD3-206ENST00000475952 BAG3O95817 575 aa13.91□□□□□ -0.18
NUDCD3-206ENST00000475952 CYP2E1P05181 493 aaPredicted RBP13.91□□□□□ -0.18
NUDCD3-206ENST00000475952 C20orf194Q5TEA3 1177 aa13.91□□□□□ -0.18
NUDCD3-206ENST00000475952 NAA16Q6N069 864 aaPredicted RBP13.91□□□□□ -0.18
NUDCD3-206ENST00000475952 CLASRPQ8N2M8 674 aaKnown RBP13.91□□□□□ -0.18
NUDCD3-206ENST00000475952 CNKSR2Q8WXI2 1034 aa13.91□□□□□ -0.18
NUDCD3-206ENST00000475952 ZKSCAN4Q969J2 545 aaPredicted RBP13.91□□□□□ -0.18
NUDCD3-206ENST00000475952 IL1RAPL2Q9NP60 686 aa13.91□□□□□ -0.18
NUDCD3-206ENST00000475952 ATRNL1Q5VV63 1379 aa13.91□□□□□ -0.18
NUDCD3-206ENST00000475952 BAZ2AQ9UIF9 1905 aaKnown RBP13.91□□□□□ -0.18
NUDCD3-206ENST00000475952 UNC80Q8N2C7 3258 aa13.9□□□□□ -0.18
NUDCD3-206ENST00000475952 CCL15-CCL14A0A0B4J2E2 113 aa13.9□□□□□ -0.18
NUDCD3-206ENST00000475952 RAB11FIP3O75154 756 aa13.9□□□□□ -0.18
NUDCD3-206ENST00000475952 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
NUDCD3-206ENST00000475952 ZAP70P43403 619 aa13.9□□□□□ -0.18
NUDCD3-206ENST00000475952 RHBDL3P58872 404 aa13.9□□□□□ -0.18
NUDCD3-206ENST00000475952 PPIL2Q13356 520 aa13.9□□□□□ -0.18
NUDCD3-206ENST00000475952 CCL15Q16663 113 aa13.9□□□□□ -0.18
NUDCD3-206ENST00000475952 DDX4Q9NQI0 724 aaKnown RBP13.9□□□□□ -0.18
NUDCD3-206ENST00000475952 ZNF112Q9UJU3 913 aa13.9□□□□□ -0.18
NUDCD3-206ENST00000475952 H0YGN5 161 aa13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 APBB1O00213 710 aa13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 PLCG2P16885 1265 aa13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 INPP5BP32019 993 aa13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 SP3Q02447 781 aa13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 PPATQ06203 517 aa13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 SNAPC2Q13487 334 aa13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 NOL9Q5SY16 702 aaKnown RBP13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 ZFPM1Q8IX07 1006 aa13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 SIRT2Q8IXJ6 389 aa13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 TEX11Q8IYF3 940 aa13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 MS4A4AQ96JQ5 239 aa13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 PTPN18Q99952 460 aa13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 TMEM106CQ9BVX2 250 aa13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 AATFQ9NY61 560 aaKnown RBP eCLIP13.89□□□□□ -0.19
NUDCD3-206ENST00000475952 DDTLA6NHG4 134 aaPredicted RBP13.88□□□□□ -0.19
NUDCD3-206ENST00000475952 IRF6O14896 467 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms