RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 NPATQ14207 1427 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 DUOX2Q9NRD8 1548 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 VAV2P52735 878 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 FAM173BQ6P4H8 233 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 NOP56O00567 594 aaKnown RBP12.29□□□□□ -0.44
VAPB-204ENST00000475243 CEP57Q86XR8 500 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 TRIM6Q9C030 488 aaPredicted RBP12.29□□□□□ -0.44
VAPB-204ENST00000475243 ARHGEF10LQ9HCE6 1279 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 MTUS1Q9ULD2 1270 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 ATP2A2P16615 1042 aaKnown RBP12.29□□□□□ -0.44
VAPB-204ENST00000475243 SEL1L2Q5TEA6 688 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 DDX17Q92841 729 aaKnown RBP12.29□□□□□ -0.44
VAPB-204ENST00000475243 HAUS7Q99871 368 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 TSGA10Q9BZW7 698 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 C19orf44Q9H6X5 657 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 ZKSCAN5Q9Y2L8 839 aa12.29□□□□□ -0.44
VAPB-204ENST00000475243 A2MP01023 1474 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 GPAA1O43292 621 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 GAS8O95995 478 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 TNNI3KQ59H18 835 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 CCDC121Q6ZUS5 278 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 DBNDD2Q9BQY9 259 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 TRIM7Q9C029 511 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 MTRF1LQ9UGC7 380 aaKnown RBP12.28□□□□□ -0.44
VAPB-204ENST00000475243 FPGT-TNNI3KV9GXZ4 949 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 ERCC5P28715 1186 aaPredicted RBP12.28□□□□□ -0.44
VAPB-204ENST00000475243 SMTNP53814 917 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 CARD14Q9BXL6 1004 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 TNFAIP3P21580 790 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 PPP2R5CQ13362 524 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 OTUD7BQ6GQQ9 843 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 KIFAP3Q92845 792 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 CCDC14Q49A88 953 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 DAPK3O43293 454 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 HPDP32754 393 aaPredicted RBP12.28□□□□□ -0.44
VAPB-204ENST00000475243 BEND3Q5T5X7 828 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 IGSF22Q8N9C0 903 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 DDX21Q9NR30 783 aaKnown RBP eCLIP12.28□□□□□ -0.44
VAPB-204ENST00000475243 GGA1Q9UJY5 639 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 MAP3K19Q56UN5 1328 aa12.28□□□□□ -0.44
VAPB-204ENST00000475243 LMTK3Q96Q04 1460 aa12.27□□□□□ -0.44
VAPB-204ENST00000475243 TRPC3Q13507 836 aa12.27□□□□□ -0.44
VAPB-204ENST00000475243 DYMQ7RTS9 669 aa12.27□□□□□ -0.44
VAPB-204ENST00000475243 IP6K1Q92551 441 aa12.27□□□□□ -0.44
VAPB-204ENST00000475243 LGR6Q9HBX8 967 aa12.27□□□□□ -0.44
VAPB-204ENST00000475243 HGSO14964 777 aaPredicted RBP12.27□□□□□ -0.44
VAPB-204ENST00000475243 TPD52P55327 224 aaPredicted RBP12.27□□□□□ -0.44
VAPB-204ENST00000475243 MYL5Q02045 173 aa12.27□□□□□ -0.44
VAPB-204ENST00000475243 INF2Q27J81 1249 aa12.27□□□□□ -0.44
VAPB-204ENST00000475243 LONRF3Q496Y0 759 aa12.27□□□□□ -0.44
VAPB-204ENST00000475243 CALCOCO2Q13137 446 aa12.27□□□□□ -0.45
VAPB-204ENST00000475243 PSMB7Q99436 277 aa12.27□□□□□ -0.45
VAPB-204ENST00000475243 GPHNQ9NQX3 736 aaPredicted RBP12.27□□□□□ -0.45
VAPB-204ENST00000475243 UTP14CQ5TAP6 766 aaKnown RBP12.27□□□□□ -0.45
VAPB-204ENST00000475243 CCDC117Q8IWD4 279 aaPredicted RBP12.27□□□□□ -0.45
VAPB-204ENST00000475243 SF3A3Q12874 501 aaKnown RBP eCLIP12.27□□□□□ -0.45
VAPB-204ENST00000475243 FAM98CQ17RN3 349 aaKnown RBP12.27□□□□□ -0.45
VAPB-204ENST00000475243 CNGA4Q8IV77 575 aa12.27□□□□□ -0.45
VAPB-204ENST00000475243 IFT74Q96LB3 600 aa12.27□□□□□ -0.45
VAPB-204ENST00000475243 METTL22Q9BUU2 404 aaPredicted RBP12.27□□□□□ -0.45
VAPB-204ENST00000475243 A0A1W2PP64 1363 aa12.27□□□□□ -0.45
VAPB-204ENST00000475243 VIMP08670 466 aaKnown RBP12.27□□□□□ -0.45
VAPB-204ENST00000475243 STRN3Q13033 797 aa12.27□□□□□ -0.45
VAPB-204ENST00000475243 GTF3C6Q969F1 213 aa12.27□□□□□ -0.45
VAPB-204ENST00000475243 DEXIO95424 95 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 PLBD2Q8NHP8 589 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 TRIM31Q9BZY9 425 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 ARHGEF35A5YM69 484 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 KCNA6P17658 529 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 TTC14Q96N46 770 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 KCNH3Q9ULD8 1083 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 USTQ9Y2C2 406 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 CTTNBP2Q8WZ74 1663 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 IVLP07476 585 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 PLCD1P51178 756 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 CNNM4Q6P4Q7 775 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 ANGEL1Q9UNK9 670 aaKnown RBP12.26□□□□□ -0.45
VAPB-204ENST00000475243 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.26□□□□□ -0.45
VAPB-204ENST00000475243 PDE8AO60658 829 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 TNNC1P63316 161 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 ANO1Q5XXA6 986 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 EYA2O00167 538 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 CRCPO75575 148 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 CSGALNACT2Q8N6G5 542 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 STAMQ92783 540 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 ZWINTO95229 277 aa12.26□□□□□ -0.45
VAPB-204ENST00000475243 ZBTB7BO15156 539 aaPredicted RBP12.25□□□□□ -0.45
VAPB-204ENST00000475243 GCNT3O95395 438 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 ASIC2Q16515 512 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.25□□□□□ -0.45
VAPB-204ENST00000475243 PPP2R3AQ06190 1150 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 ASXL2Q76L83 1435 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 PRAG1Q86YV5 1406 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 CCDC26Q8TAB7 109 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 TGFBRAP1Q8WUH2 860 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 SH2D4AQ9H788 454 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 ANAPC4Q9UJX5 808 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 SORBS3O60504 671 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 DPP8Q6V1X1 898 aaPredicted RBP12.25□□□□□ -0.45
VAPB-204ENST00000475243 JAKMIP2Q96AA8 810 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms