RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 MROH7-TTC4A0A0A0MT08 1334 aa14.07□□□□□ -0.16
HLA-DOB-208ENST00000475235 LDHCP07864 332 aa14.07□□□□□ -0.16
HLA-DOB-208ENST00000475235 MCAMP43121 646 aa14.07□□□□□ -0.16
HLA-DOB-208ENST00000475235 MECOMQ03112 1051 aa14.07□□□□□ -0.16
HLA-DOB-208ENST00000475235 IDI2Q9BXS1 227 aa14.07□□□□□ -0.16
HLA-DOB-208ENST00000475235 ENTPD3O75355 529 aa14.06□□□□□ -0.16
HLA-DOB-208ENST00000475235 MAP4K4O95819 1239 aaPredicted RBP14.06□□□□□ -0.16
HLA-DOB-208ENST00000475235 NFIAQ12857 509 aa14.06□□□□□ -0.16
HLA-DOB-208ENST00000475235 PI16Q6UXB8 463 aa14.06□□□□□ -0.16
HLA-DOB-208ENST00000475235 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.06□□□□□ -0.16
HLA-DOB-208ENST00000475235 ELP3Q9H9T3 547 aa14.06□□□□□ -0.16
HLA-DOB-208ENST00000475235 RAI14Q9P0K7 980 aa14.06□□□□□ -0.16
HLA-DOB-208ENST00000475235 LRP2BPQ9P2M1 347 aa14.06□□□□□ -0.16
HLA-DOB-208ENST00000475235 EXOC6BQ9Y2D4 811 aa14.06□□□□□ -0.16
HLA-DOB-208ENST00000475235 GPR75-ASB3A0A0A6YYF3 556 aa14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 BTDP43251 543 aa14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 TCP10Q12799 353 aa14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 VGLL4Q14135 290 aa14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 NSUN4Q96CB9 384 aaKnown RBP14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 EAF2Q96CJ1 260 aaPredicted RBP14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 OPTNQ96CV9 577 aa14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 WRNIP1Q96S55 665 aa14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 CFHR5Q9BXR6 569 aa14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 ZNF341Q9BYN7 854 aa14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 FAM198AQ9UFP1 575 aa14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 DBNLQ9UJU6 430 aaKnown RBP14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 NOM1Q5C9Z4 860 aaKnown RBP14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 OTUD7BQ6GQQ9 843 aa14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 TBC1D9Q6ZT07 1266 aa14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 CCDC8Q9H0W5 538 aaPredicted RBP14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
HLA-DOB-208ENST00000475235 MYH13Q9UKX3 1938 aa14.04□□□□□ -0.16
HLA-DOB-208ENST00000475235 RGS3P49796 1198 aa14.04□□□□□ -0.16
HLA-DOB-208ENST00000475235 IFNL1Q8IU54 200 aa14.04□□□□□ -0.16
HLA-DOB-208ENST00000475235 CLASRPQ8N2M8 674 aaKnown RBP14.04□□□□□ -0.16
HLA-DOB-208ENST00000475235 RHPN1Q8TCX5 695 aa14.04□□□□□ -0.16
HLA-DOB-208ENST00000475235 KIF1BPQ96EK5 621 aa14.04□□□□□ -0.16
HLA-DOB-208ENST00000475235 NOL10Q9BSC4 688 aaKnown RBP14.04□□□□□ -0.16
HLA-DOB-208ENST00000475235 RFX7Q2KHR2 1363 aa14.03□□□□□ -0.16
HLA-DOB-208ENST00000475235 TESPA1A2RU30 521 aaPredicted RBP14.03□□□□□ -0.16
HLA-DOB-208ENST00000475235 SPDYE5A6NIY4 337 aa14.03□□□□□ -0.16
HLA-DOB-208ENST00000475235 RAB11FIP3O75154 756 aa14.03□□□□□ -0.16
HLA-DOB-208ENST00000475235 WDHD1O75717 1129 aaPredicted RBP14.03□□□□□ -0.16
HLA-DOB-208ENST00000475235 GJA5P36382 358 aa14.03□□□□□ -0.16
HLA-DOB-208ENST00000475235 MIGA2Q7L4E1 593 aa14.03□□□□□ -0.16
HLA-DOB-208ENST00000475235 AACSQ86V21 672 aa14.03□□□□□ -0.16
HLA-DOB-208ENST00000475235 ERO1BQ86YB8 467 aa14.03□□□□□ -0.16
HLA-DOB-208ENST00000475235 SNRKQ9NRH2 765 aa14.03□□□□□ -0.16
HLA-DOB-208ENST00000475235 TLR7Q9NYK1 1049 aaKnown RBP14.03□□□□□ -0.16
HLA-DOB-208ENST00000475235 TBC1D8O95759 1140 aa14.02□□□□□ -0.16
HLA-DOB-208ENST00000475235 BAG3O95817 575 aa14.02□□□□□ -0.16
HLA-DOB-208ENST00000475235 CYP2E1P05181 493 aaPredicted RBP14.02□□□□□ -0.16
HLA-DOB-208ENST00000475235 GTF2A2P52657 109 aa14.02□□□□□ -0.16
HLA-DOB-208ENST00000475235 RHBDL3P58872 404 aa14.02□□□□□ -0.16
HLA-DOB-208ENST00000475235 C20orf194Q5TEA3 1177 aa14.02□□□□□ -0.16
HLA-DOB-208ENST00000475235 NAA16Q6N069 864 aaPredicted RBP14.02□□□□□ -0.16
HLA-DOB-208ENST00000475235 ZSCAN29Q8IWY8 852 aaPredicted RBP14.02□□□□□ -0.16
HLA-DOB-208ENST00000475235 SIRT2Q8IXJ6 389 aa14.02□□□□□ -0.16
HLA-DOB-208ENST00000475235 ZNF384Q8TF68 577 aa14.02□□□□□ -0.16
HLA-DOB-208ENST00000475235 ABHD8Q96I13 439 aa14.02□□□□□ -0.16
HLA-DOB-208ENST00000475235 ZFP91Q96JP5 570 aaPredicted RBP14.02□□□□□ -0.16
HLA-DOB-208ENST00000475235 SNCAIPQ9Y6H5 919 aa14.02□□□□□ -0.16
HLA-DOB-208ENST00000475235 GPR25O00155 361 aa14.01□□□□□ -0.17
HLA-DOB-208ENST00000475235 RRP9O43818 475 aaKnown RBP14.01□□□□□ -0.17
HLA-DOB-208ENST00000475235 PLCG2P16885 1265 aa14.01□□□□□ -0.17
HLA-DOB-208ENST00000475235 ZAP70P43403 619 aa14.01□□□□□ -0.17
HLA-DOB-208ENST00000475235 PICALMQ13492 652 aa14.01□□□□□ -0.17
HLA-DOB-208ENST00000475235 DGKZQ13574 1117 aa14.01□□□□□ -0.17
HLA-DOB-208ENST00000475235 TMED8Q6PL24 325 aaPredicted RBP14.01□□□□□ -0.17
HLA-DOB-208ENST00000475235 ZKSCAN4Q969J2 545 aaPredicted RBP14.01□□□□□ -0.17
HLA-DOB-208ENST00000475235 OTUD5Q96G74 571 aa14.01□□□□□ -0.17
HLA-DOB-208ENST00000475235 IL1RAPL2Q9NP60 686 aa14.01□□□□□ -0.17
HLA-DOB-208ENST00000475235 ZNF112Q9UJU3 913 aa14.01□□□□□ -0.17
HLA-DOB-208ENST00000475235 SPDYE4A6NLX3 237 aa14□□□□□ -0.17
HLA-DOB-208ENST00000475235 IGF2BP3O00425 579 aaKnown RBP eCLIP14□□□□□ -0.17
HLA-DOB-208ENST00000475235 IFIT2P09913 472 aaKnown RBP14□□□□□ -0.17
HLA-DOB-208ENST00000475235 PPATQ06203 517 aa14□□□□□ -0.17
HLA-DOB-208ENST00000475235 ZFPM1Q8IX07 1006 aa14□□□□□ -0.17
HLA-DOB-208ENST00000475235 MS4A4AQ96JQ5 239 aa14□□□□□ -0.17
HLA-DOB-208ENST00000475235 MCOLN1Q9GZU1 580 aa14□□□□□ -0.17
HLA-DOB-208ENST00000475235 CCL15-CCL14A0A0B4J2E2 113 aa14□□□□□ -0.17
HLA-DOB-208ENST00000475235 PPIL2Q13356 520 aa14□□□□□ -0.17
HLA-DOB-208ENST00000475235 CCL15Q16663 113 aa14□□□□□ -0.17
HLA-DOB-208ENST00000475235 NOL9Q5SY16 702 aaKnown RBP14□□□□□ -0.17
HLA-DOB-208ENST00000475235 CTU1Q7Z7A3 348 aaKnown RBP14□□□□□ -0.17
HLA-DOB-208ENST00000475235 CERS3Q8IU89 383 aa14□□□□□ -0.17
HLA-DOB-208ENST00000475235 ZNF296Q8WUU4 475 aaPredicted RBP14□□□□□ -0.17
HLA-DOB-208ENST00000475235 DDX4Q9NQI0 724 aaKnown RBP14□□□□□ -0.17
HLA-DOB-208ENST00000475235 ATRNL1Q5VV63 1379 aa13.99□□□□□ -0.17
HLA-DOB-208ENST00000475235 APBB1O00213 710 aa13.99□□□□□ -0.17
HLA-DOB-208ENST00000475235 FKTNO75072 461 aa13.99□□□□□ -0.17
HLA-DOB-208ENST00000475235 CETPP11597 493 aa13.99□□□□□ -0.17
HLA-DOB-208ENST00000475235 INPP5BP32019 993 aa13.99□□□□□ -0.17
HLA-DOB-208ENST00000475235 PPP4CP60510 307 aa13.99□□□□□ -0.17
HLA-DOB-208ENST00000475235 MAP3K10Q02779 954 aa13.99□□□□□ -0.17
HLA-DOB-208ENST00000475235 SNAPC2Q13487 334 aa13.99□□□□□ -0.17
HLA-DOB-208ENST00000475235 SH3BP5LQ7L8J4 393 aa13.99□□□□□ -0.17
HLA-DOB-208ENST00000475235 TEX11Q8IYF3 940 aa13.99□□□□□ -0.17
HLA-DOB-208ENST00000475235 PIH1D3Q9NQM4 214 aaKnown RBP13.99□□□□□ -0.17
HLA-DOB-208ENST00000475235 COL2A1P02458 1487 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms