RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 BRCA2P51587 3418 aa14.55□□□□□ -0.08
CLIP2-204ENST00000474962 BTBD19C9JJ37 291 aa14.54□□□□□ -0.08
CLIP2-204ENST00000474962 CETPP11597 493 aa14.54□□□□□ -0.08
CLIP2-204ENST00000474962 OS9Q13438 667 aaPredicted RBP14.54□□□□□ -0.08
CLIP2-204ENST00000474962 SNAPC2Q13487 334 aa14.54□□□□□ -0.08
CLIP2-204ENST00000474962 POLA2Q14181 598 aa14.54□□□□□ -0.08
CLIP2-204ENST00000474962 TAF1CQ15572 869 aaPredicted RBP14.54□□□□□ -0.08
CLIP2-204ENST00000474962 CEP85Q6P2H3 762 aa14.54□□□□□ -0.08
CLIP2-204ENST00000474962 ERICH6Q7L0X2 663 aa14.54□□□□□ -0.08
CLIP2-204ENST00000474962 SH3BP5LQ7L8J4 393 aa14.54□□□□□ -0.08
CLIP2-204ENST00000474962 SPATA5Q8NB90 893 aa14.54□□□□□ -0.08
CLIP2-204ENST00000474962 ERO1AQ96HE7 468 aa14.54□□□□□ -0.08
CLIP2-204ENST00000474962 IDI2Q9BXS1 227 aa14.54□□□□□ -0.08
CLIP2-204ENST00000474962 ZFYVE28Q9HCC9 887 aa14.54□□□□□ -0.08
CLIP2-204ENST00000474962 DDX4Q9NQI0 724 aaKnown RBP14.54□□□□□ -0.08
CLIP2-204ENST00000474962 GAKO14976 1311 aa14.54□□□□□ -0.08
CLIP2-204ENST00000474962 OTOFQ9HC10 1997 aa14.53□□□□□ -0.08
CLIP2-204ENST00000474962 PDS5AQ29RF7 1337 aaKnown RBP14.53□□□□□ -0.08
CLIP2-204ENST00000474962 PHF20L1A8MW92 1017 aa14.53□□□□□ -0.08
CLIP2-204ENST00000474962 SURF6O75683 361 aaKnown RBP14.53□□□□□ -0.08
CLIP2-204ENST00000474962 WDHD1O75717 1129 aaPredicted RBP14.53□□□□□ -0.08
CLIP2-204ENST00000474962 BTDP43251 543 aa14.53□□□□□ -0.08
CLIP2-204ENST00000474962 PPATQ06203 517 aa14.53□□□□□ -0.08
CLIP2-204ENST00000474962 PPIL2Q13356 520 aa14.53□□□□□ -0.08
CLIP2-204ENST00000474962 POTEDQ86YR6 584 aa14.53□□□□□ -0.08
CLIP2-204ENST00000474962 EXOC6Q8TAG9 804 aa14.53□□□□□ -0.08
CLIP2-204ENST00000474962 SSH3Q8TE77 659 aa14.53□□□□□ -0.08
CLIP2-204ENST00000474962 EFCC1Q9HA90 598 aa14.53□□□□□ -0.08
CLIP2-204ENST00000474962 PTPN22Q9Y2R2 807 aa14.53□□□□□ -0.08
CLIP2-204ENST00000474962 RPAP1Q9BWH6 1393 aaPredicted RBP14.52□□□□□ -0.08
CLIP2-204ENST00000474962 GPR75-ASB3A0A0A6YYF3 556 aa14.52□□□□□ -0.09
CLIP2-204ENST00000474962 DDTLA6NHG4 134 aaPredicted RBP14.52□□□□□ -0.09
CLIP2-204ENST00000474962 ENTPD3O75355 529 aa14.52□□□□□ -0.09
CLIP2-204ENST00000474962 MCAMP43121 646 aa14.52□□□□□ -0.09
CLIP2-204ENST00000474962 PICALMQ13492 652 aa14.52□□□□□ -0.09
CLIP2-204ENST00000474962 ZSCAN29Q8IWY8 852 aaPredicted RBP14.52□□□□□ -0.09
CLIP2-204ENST00000474962 SLF2Q8IX21 1173 aa14.52□□□□□ -0.09
CLIP2-204ENST00000474962 NSUN4Q96CB9 384 aaKnown RBP14.52□□□□□ -0.09
CLIP2-204ENST00000474962 SNRKQ9NRH2 765 aa14.52□□□□□ -0.09
CLIP2-204ENST00000474962 MYH13Q9UKX3 1938 aa14.52□□□□□ -0.09
CLIP2-204ENST00000474962 AK9Q5TCS8 1911 aa14.51□□□□□ -0.09
CLIP2-204ENST00000474962 ARID4AP29374 1257 aaPredicted RBP14.51□□□□□ -0.09
CLIP2-204ENST00000474962 RHBDL3P58872 404 aa14.51□□□□□ -0.09
CLIP2-204ENST00000474962 TNNI3KQ59H18 835 aa14.51□□□□□ -0.09
CLIP2-204ENST00000474962 RAI14Q9P0K7 980 aa14.51□□□□□ -0.09
CLIP2-204ENST00000474962 FPGT-TNNI3KV9GXZ4 949 aa14.51□□□□□ -0.09
CLIP2-204ENST00000474962 MROH7-TTC4A0A0A0MT08 1334 aa14.5□□□□□ -0.09
CLIP2-204ENST00000474962 TLR2O60603 784 aa14.5□□□□□ -0.09
CLIP2-204ENST00000474962 MAP3K10Q02779 954 aa14.5□□□□□ -0.09
CLIP2-204ENST00000474962 MOGSQ13724 837 aa14.5□□□□□ -0.09
CLIP2-204ENST00000474962 HSP90AB4PQ58FF6 505 aa14.5□□□□□ -0.09
CLIP2-204ENST00000474962 DBNDD2Q9BQY9 259 aa14.5□□□□□ -0.09
CLIP2-204ENST00000474962 LRP2BPQ9P2M1 347 aa14.5□□□□□ -0.09
CLIP2-204ENST00000474962 ZHX2Q9Y6X8 837 aa14.5□□□□□ -0.09
CLIP2-204ENST00000474962 MYH2Q9UKX2 1941 aa14.5□□□□□ -0.09
CLIP2-204ENST00000474962 ATRNL1Q5VV63 1379 aa14.49□□□□□ -0.09
CLIP2-204ENST00000474962 ECM2O94769 699 aaPredicted RBP14.49□□□□□ -0.09
CLIP2-204ENST00000474962 LDHCP07864 332 aa14.49□□□□□ -0.09
CLIP2-204ENST00000474962 UQCRFS1P1P0C7P4 283 aa14.49□□□□□ -0.09
CLIP2-204ENST00000474962 NOL9Q5SY16 702 aaKnown RBP14.49□□□□□ -0.09
CLIP2-204ENST00000474962 ARHGAP39Q9C0H5 1083 aa14.49□□□□□ -0.09
CLIP2-204ENST00000474962 GPR108Q9NPR9 543 aa14.49□□□□□ -0.09
CLIP2-204ENST00000474962 KCNH4Q9UQ05 1017 aa14.49□□□□□ -0.09
CLIP2-204ENST00000474962 NOP58Q9Y2X3 529 aaKnown RBP14.49□□□□□ -0.09
CLIP2-204ENST00000474962 PDHXO00330 501 aa14.48□□□□□ -0.09
CLIP2-204ENST00000474962 PTPRAP18433 802 aa14.48□□□□□ -0.09
CLIP2-204ENST00000474962 GSTO1P78417 241 aa14.48□□□□□ -0.09
CLIP2-204ENST00000474962 CCDC158Q5M9N0 1113 aa14.48□□□□□ -0.09
CLIP2-204ENST00000474962 TTC39AQ5SRH9 613 aa14.48□□□□□ -0.09
CLIP2-204ENST00000474962 CCDC8Q9H0W5 538 aaPredicted RBP14.48□□□□□ -0.09
CLIP2-204ENST00000474962 ZCCHC17Q9NP64 241 aaKnown RBP14.48□□□□□ -0.09
CLIP2-204ENST00000474962 CPA4Q9UI42 421 aa14.48□□□□□ -0.09
CLIP2-204ENST00000474962 LAMB1P07942 1786 aa14.47□□□□□ -0.09
CLIP2-204ENST00000474962 POTEFA5A3E0 1075 aa14.47□□□□□ -0.09
CLIP2-204ENST00000474962 FAM196BA6NMK8 535 aa14.47□□□□□ -0.09
CLIP2-204ENST00000474962 CXCL11O14625 94 aa14.47□□□□□ -0.09
CLIP2-204ENST00000474962 CYP2E1P05181 493 aaPredicted RBP14.47□□□□□ -0.09
CLIP2-204ENST00000474962 GPAT2Q6NUI2 795 aa14.47□□□□□ -0.09
CLIP2-204ENST00000474962 C17orf99Q6UX52 265 aa14.47□□□□□ -0.09
CLIP2-204ENST00000474962 ANKRD23Q86SG2 305 aa14.47□□□□□ -0.09
CLIP2-204ENST00000474962 ERC1Q8IUD2 1116 aa14.47□□□□□ -0.09
CLIP2-204ENST00000474962 SCYL3Q8IZE3 742 aa14.47□□□□□ -0.09
CLIP2-204ENST00000474962 EAF2Q96CJ1 260 aaPredicted RBP14.47□□□□□ -0.09
CLIP2-204ENST00000474962 RWDD1Q9H446 243 aaPredicted RBP14.47□□□□□ -0.09
CLIP2-204ENST00000474962 PICK1Q9NRD5 415 aa14.47□□□□□ -0.09
CLIP2-204ENST00000474962 TLR7Q9NYK1 1049 aaKnown RBP14.47□□□□□ -0.09
CLIP2-204ENST00000474962 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.47□□□□□ -0.09
CLIP2-204ENST00000474962 ZBTB47Q9UFB7 747 aaPredicted RBP14.47□□□□□ -0.09
CLIP2-204ENST00000474962 AFG3L2Q9Y4W6 797 aa14.47□□□□□ -0.09
CLIP2-204ENST00000474962 PDE4DIPQ5VU43 2346 aa14.47□□□□□ -0.09
CLIP2-204ENST00000474962 RFX7Q2KHR2 1363 aa14.47□□□□□ -0.09
CLIP2-204ENST00000474962 CTNND1O60716 968 aaKnown RBP14.46□□□□□ -0.09
CLIP2-204ENST00000474962 ZAP70P43403 619 aa14.46□□□□□ -0.09
CLIP2-204ENST00000474962 LACTBP83111 547 aaPredicted RBP14.46□□□□□ -0.09
CLIP2-204ENST00000474962 CCDC84Q86UT8 332 aaPredicted RBP14.46□□□□□ -0.09
CLIP2-204ENST00000474962 SH3RF3Q8TEJ3 882 aaPredicted RBP14.46□□□□□ -0.09
CLIP2-204ENST00000474962 DBNLQ9UJU6 430 aaKnown RBP14.46□□□□□ -0.09
CLIP2-204ENST00000474962 EXOC6BQ9Y2D4 811 aa14.46□□□□□ -0.09
CLIP2-204ENST00000474962 PCDHB15Q9Y5E8 787 aa14.46□□□□□ -0.09
CLIP2-204ENST00000474962 PTCH2Q9Y6C5 1203 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms