RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 KRT85P78386 507 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 ACTN3Q08043 901 aaPredicted RBP4.74□□□□□ -1.65
USP16-205ENST00000474835 ADCY2Q08462 1091 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 NNTQ13423 1086 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 PABPC1LQ4VXU2 614 aaKnown RBP4.74□□□□□ -1.65
USP16-205ENST00000474835 DNTTIP2Q5QJE6 756 aaKnown RBP4.74□□□□□ -1.65
USP16-205ENST00000474835 DPY19L2P1Q6NXN4 242 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 TOGARAM2Q6ZUX3 1019 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 CCAR1Q8IX12 1150 aaKnown RBP4.74□□□□□ -1.65
USP16-205ENST00000474835 IQCKQ8N0W5 287 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 ZFAND2BQ8WV99 257 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 CNKSR1Q969H4 720 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 IRX2Q9BZI1 471 aaPredicted RBP4.74□□□□□ -1.65
USP16-205ENST00000474835 CCDC134Q9H6E4 229 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 ATP6V0A4Q9HBG4 840 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 TERF2IPQ9NYB0 399 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 SLC12A4Q9UP95 1085 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 ROBO2Q9HCK4 1378 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 FER1L6Q2WGJ9 1857 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 SIGLEC16A6NMB1 481 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 PPP6R2O75170 966 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 GNAI2P04899 355 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 ERCC3P19447 782 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 MCCP23508 829 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 HNRNPH3P31942 346 aaKnown RBP4.74□□□□□ -1.65
USP16-205ENST00000474835 IRAK1P51617 712 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 PDIA6Q15084 440 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 TTC31Q49AM3 519 aaPredicted RBP4.74□□□□□ -1.65
USP16-205ENST00000474835 TTMPQ5BVD1 217 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 RAD9BQ6WBX8 426 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 METTL16Q86W50 562 aaKnown RBP4.74□□□□□ -1.65
USP16-205ENST00000474835 CABP2Q9NPB3 220 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 SEC31BQ9NQW1 1179 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 LOXHD1Q8IVV2 1947 aa4.74□□□□□ -1.65
USP16-205ENST00000474835 GTF2A1P52655 376 aaPredicted RBP4.73□□□□□ -1.65
USP16-205ENST00000474835 USP14P54578 494 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 PDE4BQ07343 736 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 CASP8Q14790 479 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 GALNTL6Q49A17 601 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 RC3H1Q5TC82 1133 aaKnown RBP4.73□□□□□ -1.65
USP16-205ENST00000474835 RCSD1Q6JBY9 416 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 DPY19L2Q6NUT2 758 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 CRELD2Q6UXH1 353 aaPredicted RBP4.73□□□□□ -1.65
USP16-205ENST00000474835 MMGT1Q8N4V1 131 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 RHPN1Q8TCX5 695 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 DHX58Q96C10 678 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 ZNF274Q96GC6 653 aaPredicted RBP4.73□□□□□ -1.65
USP16-205ENST00000474835 EPC1Q9H2F5 836 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 CDC23Q9UJX2 597 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 PCDHA7Q9UN72 937 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 ZNF536O15090 1300 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 GOLGA6L9A6NEM1 432 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 SMNDC1O75940 238 aaKnown RBP eCLIP4.73□□□□□ -1.65
USP16-205ENST00000474835 ABL1P00519 1130 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 MYBL2P10244 700 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 GCFC2P16383 781 aaKnown RBP4.73□□□□□ -1.65
USP16-205ENST00000474835 CMA1P23946 247 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 GCKP35557 465 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 SRPK2P78362 688 aaKnown RBP4.73□□□□□ -1.65
USP16-205ENST00000474835 COBLL1Q53SF7 1204 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 KDM7AQ6ZMT4 941 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 CCDC91Q7Z6B0 441 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 RNF217Q8TC41 542 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 ZNF507Q8TCN5 953 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 COG1Q8WTW3 980 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.73□□□□□ -1.653e-8■□□□□ 10.7
USP16-205ENST00000474835 NAA15Q9BXJ9 866 aaKnown RBP4.73□□□□□ -1.65
USP16-205ENST00000474835 UPF3BQ9BZI7 483 aaKnown RBP4.73□□□□□ -1.65
USP16-205ENST00000474835 ABCB6Q9NP58 842 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 GNL3LQ9NVN8 582 aaKnown RBP4.73□□□□□ -1.65
USP16-205ENST00000474835 PPIP5K2O43314 1243 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 WDHD1O75717 1129 aaPredicted RBP4.73□□□□□ -1.65
USP16-205ENST00000474835 DNAJC8O75937 253 aaPredicted RBP4.73□□□□□ -1.65
USP16-205ENST00000474835 KIAA0753Q2KHM9 967 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 NBPF9Q3BBW0 867 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 DNAJC21Q5F1R6 531 aaKnown RBP4.73□□□□□ -1.65
USP16-205ENST00000474835 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.73□□□□□ -1.65
USP16-205ENST00000474835 GGNBP2Q9H3C7 697 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 ATP8A2Q9NTI2 1148 aa4.73□□□□□ -1.65
USP16-205ENST00000474835 DDX20Q9UHI6 824 aaKnown RBP4.73□□□□□ -1.65
USP16-205ENST00000474835 WNT7AO00755 349 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 CCP110O43303 1012 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 NPM3O75607 178 aaKnown RBP4.72□□□□□ -1.65
USP16-205ENST00000474835 CTDSPL2Q05D32 466 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 TPD52L1Q16890 204 aaPredicted RBP4.72□□□□□ -1.65
USP16-205ENST00000474835 SPATS2Q86XZ4 545 aaKnown RBP4.72□□□□□ -1.65
USP16-205ENST00000474835 SPC24Q8NBT2 197 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 NKX2-3Q8TAU0 364 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 SMCR8Q8TEV9 937 aaPredicted RBP4.72□□□□□ -1.65
USP16-205ENST00000474835 USP28Q96RU2 1077 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 DNAJC7Q99615 494 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 TNMDQ9H2S6 317 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 PTPRFP10586 1907 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 C10orf71Q711Q0 1435 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 TMEM232C9JQI7 657 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 POTEB2H3BUK9 544 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 RNF225M0QZC1 329 aaPredicted RBP4.72□□□□□ -1.65
USP16-205ENST00000474835 GHRP10912 638 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 PPP2R3AQ06190 1150 aa4.72□□□□□ -1.65
USP16-205ENST00000474835 NTRK3Q16288 839 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms