RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 TNNI3KQ59H18 835 aa25.02■■□□□ 1.6
PDLIM4-206ENST00000474421 NSUN4Q96CB9 384 aaKnown RBP25.02■■□□□ 1.6
PDLIM4-206ENST00000474421 C1orf115Q9H7X2 142 aa25.02■■□□□ 1.6
PDLIM4-206ENST00000474421 RAI14Q9P0K7 980 aa25.02■■□□□ 1.6
PDLIM4-206ENST00000474421 KCNH4Q9UQ05 1017 aa25.02■■□□□ 1.6
PDLIM4-206ENST00000474421 PTPN22Q9Y2R2 807 aa25.02■■□□□ 1.6
PDLIM4-206ENST00000474421 FPGT-TNNI3KV9GXZ4 949 aa25.02■■□□□ 1.6
PDLIM4-206ENST00000474421 ATRNL1Q5VV63 1379 aa25.02■■□□□ 1.6
PDLIM4-206ENST00000474421 TLR2O60603 784 aa25.01■■□□□ 1.59
PDLIM4-206ENST00000474421 MCAMP43121 646 aa25.01■■□□□ 1.59
PDLIM4-206ENST00000474421 TTC39AQ5SRH9 613 aa25.01■■□□□ 1.59
PDLIM4-206ENST00000474421 PI16Q6UXB8 463 aa25.01■■□□□ 1.59
PDLIM4-206ENST00000474421 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.01■■□□□ 1.59
PDLIM4-206ENST00000474421 LRP2BPQ9P2M1 347 aa25.01■■□□□ 1.59
PDLIM4-206ENST00000474421 NOP58Q9Y2X3 529 aaKnown RBP25.01■■□□□ 1.59
PDLIM4-206ENST00000474421 MS4A1P11836 297 aa25■■□□□ 1.59
PDLIM4-206ENST00000474421 MAP3K10Q02779 954 aa25■■□□□ 1.59
PDLIM4-206ENST00000474421 PICALMQ13492 652 aa25■■□□□ 1.59
PDLIM4-206ENST00000474421 TBC1D9Q6ZT07 1266 aa25■■□□□ 1.59
PDLIM4-206ENST00000474421 ANKRD23Q86SG2 305 aa25■■□□□ 1.59
PDLIM4-206ENST00000474421 PICK1Q9NRD5 415 aa25■■□□□ 1.59
PDLIM4-206ENST00000474421 TNRC18O15417 2968 aaPredicted RBP25■■□□□ 1.59
PDLIM4-206ENST00000474421 HTTP42858 3142 aa25■■□□□ 1.59
PDLIM4-206ENST00000474421 PDE4DIPQ5VU43 2346 aa25■■□□□ 1.59
PDLIM4-206ENST00000474421 PHF20L1A8MW92 1017 aa24.99■■□□□ 1.59
PDLIM4-206ENST00000474421 CXCL11O14625 94 aa24.99■■□□□ 1.59
PDLIM4-206ENST00000474421 IGSF3O75054 1194 aa24.99■■□□□ 1.59
PDLIM4-206ENST00000474421 RHBDL3P58872 404 aa24.99■■□□□ 1.59
PDLIM4-206ENST00000474421 SH3BP5LQ7L8J4 393 aa24.99■■□□□ 1.59
PDLIM4-206ENST00000474421 SCYL3Q8IZE3 742 aa24.99■■□□□ 1.59
PDLIM4-206ENST00000474421 ZNF384Q8TF68 577 aa24.99■■□□□ 1.59
PDLIM4-206ENST00000474421 NOL10Q9BSC4 688 aaKnown RBP24.99■■□□□ 1.59
PDLIM4-206ENST00000474421 DDX4Q9NQI0 724 aaKnown RBP24.99■■□□□ 1.59
PDLIM4-206ENST00000474421 KIF22Q14807 665 aa24.98■■□□□ 1.59
PDLIM4-206ENST00000474421 DDTLA6NHG4 134 aaPredicted RBP24.97■■□□□ 1.59
PDLIM4-206ENST00000474421 ZNF512BQ96KM6 892 aaPredicted RBP24.97■■□□□ 1.59
PDLIM4-206ENST00000474421 DBNDD2Q9BQY9 259 aa24.97■■□□□ 1.59
PDLIM4-206ENST00000474421 TBC1D12O60347 775 aa24.96■■□□□ 1.59
PDLIM4-206ENST00000474421 CTNND1O60716 968 aaKnown RBP24.96■■□□□ 1.59
PDLIM4-206ENST00000474421 COL2A1P02458 1487 aaPredicted RBP24.96■■□□□ 1.59
PDLIM4-206ENST00000474421 PDHXO00330 501 aa24.95■■□□□ 1.58
PDLIM4-206ENST00000474421 BAG3O95817 575 aa24.95■■□□□ 1.58
PDLIM4-206ENST00000474421 GNRH1P01148 92 aa24.95■■□□□ 1.58
PDLIM4-206ENST00000474421 PLCG2P16885 1265 aa24.95■■□□□ 1.58
PDLIM4-206ENST00000474421 NAA16Q6N069 864 aaPredicted RBP24.95■■□□□ 1.58
PDLIM4-206ENST00000474421 CEP85Q6P2H3 762 aa24.95■■□□□ 1.58
PDLIM4-206ENST00000474421 ARMC5Q96C12 935 aa24.95■■□□□ 1.58
PDLIM4-206ENST00000474421 ZHX2Q9Y6X8 837 aa24.95■■□□□ 1.58
PDLIM4-206ENST00000474421 CENPFP49454 3210 aa24.94■■□□□ 1.58
PDLIM4-206ENST00000474421 DOCK1Q14185 1865 aa24.94■■□□□ 1.58
PDLIM4-206ENST00000474421 PTPRAP18433 802 aa24.94■■□□□ 1.58
PDLIM4-206ENST00000474421 LACTBP83111 547 aaPredicted RBP24.94■■□□□ 1.58
PDLIM4-206ENST00000474421 FASTKD5Q7L8L6 764 aaKnown RBP24.94■■□□□ 1.58
PDLIM4-206ENST00000474421 ERC1Q8IUD2 1116 aa24.94■■□□□ 1.58
PDLIM4-206ENST00000474421 SNRKQ9NRH2 765 aa24.94■■□□□ 1.58
PDLIM4-206ENST00000474421 MAST2Q6P0Q8 1798 aa24.94■■□□□ 1.58
PDLIM4-206ENST00000474421 CAP1Q01518 475 aa24.93■■□□□ 1.58
PDLIM4-206ENST00000474421 C17orf99Q6UX52 265 aa24.93■■□□□ 1.58
PDLIM4-206ENST00000474421 TEX11Q8IYF3 940 aa24.93■■□□□ 1.58
PDLIM4-206ENST00000474421 PANK1Q8TE04 598 aa24.93■■□□□ 1.58
PDLIM4-206ENST00000474421 PARK7Q99497 189 aaKnown RBP24.93■■□□□ 1.58
PDLIM4-206ENST00000474421 OSBPL5Q9H0X9 879 aaPredicted RBP24.93■■□□□ 1.58
PDLIM4-206ENST00000474421 MOGSQ13724 837 aa24.92■■□□□ 1.58
PDLIM4-206ENST00000474421 NBPF11Q86T75 865 aa24.92■■□□□ 1.58
PDLIM4-206ENST00000474421 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.92■■□□□ 1.58
PDLIM4-206ENST00000474421 DBNLQ9UJU6 430 aaKnown RBP24.92■■□□□ 1.58
PDLIM4-206ENST00000474421 AFG3L2Q9Y4W6 797 aa24.92■■□□□ 1.58
PDLIM4-206ENST00000474421 A0A0G2JLL6 359 aaPredicted RBP24.91■■□□□ 1.58
PDLIM4-206ENST00000474421 CYP2E1P05181 493 aaPredicted RBP24.91■■□□□ 1.58
PDLIM4-206ENST00000474421 PRMT2P55345 433 aa24.91■■□□□ 1.58
PDLIM4-206ENST00000474421 HSP90AB4PQ58FF6 505 aa24.91■■□□□ 1.58
PDLIM4-206ENST00000474421 PRRT2Q7Z6L0 340 aaPredicted RBP24.91■■□□□ 1.58
PDLIM4-206ENST00000474421 KIAA0100Q14667 2235 aaKnown RBP24.9■■□□□ 1.58
PDLIM4-206ENST00000474421 PPP4CP60510 307 aa24.9■■□□□ 1.58
PDLIM4-206ENST00000474421 SLC9C1Q4G0N8 1177 aa24.9■■□□□ 1.58
PDLIM4-206ENST00000474421 EAF2Q96CJ1 260 aaPredicted RBP24.9■■□□□ 1.58
PDLIM4-206ENST00000474421 CCDC8Q9H0W5 538 aaPredicted RBP24.9■■□□□ 1.58
PDLIM4-206ENST00000474421 RBBP6Q7Z6E9 1792 aaKnown RBP24.9■■□□□ 1.58
PDLIM4-206ENST00000474421 SH3RF3Q8TEJ3 882 aaPredicted RBP24.89■■□□□ 1.58
PDLIM4-206ENST00000474421 DHX36Q9H2U1 1008 aaKnown RBP24.89■■□□□ 1.58
PDLIM4-206ENST00000474421 AATFQ9NY61 560 aaKnown RBP eCLIP24.89■■□□□ 1.58
PDLIM4-206ENST00000474421 CPA4Q9UI42 421 aa24.89■■□□□ 1.58
PDLIM4-206ENST00000474421 HERC5Q9UII4 1024 aaKnown RBP24.89■■□□□ 1.58
PDLIM4-206ENST00000474421 SLC45A1Q9Y2W3 748 aa24.89■■□□□ 1.58
PDLIM4-206ENST00000474421 PTCH2Q9Y6C5 1203 aa24.89■■□□□ 1.58
PDLIM4-206ENST00000474421 PHIPQ8WWQ0 1821 aa24.89■■□□□ 1.57
PDLIM4-206ENST00000474421 ADGRA2Q96PE1 1338 aa24.88■■□□□ 1.57
PDLIM4-206ENST00000474421 PTPRFP10586 1907 aa24.88■■□□□ 1.57
PDLIM4-206ENST00000474421 ZAP70P43403 619 aa24.88■■□□□ 1.57
PDLIM4-206ENST00000474421 GPAT2Q6NUI2 795 aa24.88■■□□□ 1.57
PDLIM4-206ENST00000474421 TBC1D2Q9BYX2 928 aa24.88■■□□□ 1.57
PDLIM4-206ENST00000474421 ARHGAP39Q9C0H5 1083 aa24.88■■□□□ 1.57
PDLIM4-206ENST00000474421 CHMP4BQ9H444 224 aaKnown RBP24.88■■□□□ 1.57
PDLIM4-206ENST00000474421 PI4KBQ9UBF8 816 aa24.88■■□□□ 1.57
PDLIM4-206ENST00000474421 MYO5AQ9Y4I1 1855 aaKnown RBP24.87■■□□□ 1.57
PDLIM4-206ENST00000474421 HOXD10P28358 340 aa24.87■■□□□ 1.57
PDLIM4-206ENST00000474421 TMED8Q6PL24 325 aaPredicted RBP24.87■■□□□ 1.57
PDLIM4-206ENST00000474421 TMEM106CQ9BVX2 250 aa24.87■■□□□ 1.57
PDLIM4-206ENST00000474421 TLR7Q9NYK1 1049 aaKnown RBP24.87■■□□□ 1.57
PDLIM4-206ENST00000474421 DDX19BQ9UMR2 479 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms