RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 TNNI3KQ59H18 835 aa6.26□□□□□ -1.41
BRCA1-212ENST00000473961 FAM196AQ6ZSG2 479 aa6.26□□□□□ -1.41
BRCA1-212ENST00000473961 HFE2Q6ZVN8 426 aa6.26□□□□□ -1.41
BRCA1-212ENST00000473961 DZIP1LQ8IYY4 767 aaKnown RBP6.26□□□□□ -1.41
BRCA1-212ENST00000473961 EAF1Q96JC9 268 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-212ENST00000473961 TLR6Q9Y2C9 796 aa6.26□□□□□ -1.41
BRCA1-212ENST00000473961 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-212ENST00000473961 TLDC2A0PJX2 215 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 METTL12A8MUP2 240 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 J3QW42 95 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 GREM1O60565 184 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 TRPA1O75762 1119 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 IMPDH2P12268 514 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 CPB1P15086 417 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 ATP11AP98196 1134 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 PCDH1Q08174 1060 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 MPP2Q14168 576 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 FBXO11Q86XK2 927 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 POU5F2Q8N7G0 328 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 MKL1Q969V6 931 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 PLD4Q96BZ4 506 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 CRBNQ96SW2 442 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 SRRTQ9BXP5 876 aaKnown RBP6.25□□□□□ -1.41
BRCA1-212ENST00000473961 GINM1Q9NU53 330 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 FRRS1LQ9P0K9 344 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 SIRPGQ9P1W8 387 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 SLC6A14Q9UN76 642 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 CADPSQ9ULU8 1353 aa6.25□□□□□ -1.41
BRCA1-212ENST00000473961 B3GALT4O96024 378 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 ARL4DP49703 201 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 ZNF165P49910 485 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 AP3B2Q13367 1082 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 LLGL2Q6P1M3 1020 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 GIMAP6Q6P9H5 292 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 SLITRK4Q8IW52 837 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 DTWD1Q8N5C7 304 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 OR6P1Q8NGX9 317 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 GATAD2BQ8WXI9 593 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 FERD3LQ96RJ6 166 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 POP1Q99575 1024 aaKnown RBP6.24□□□□□ -1.41
BRCA1-212ENST00000473961 LRRC3Q9BY71 257 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 MUC3BQ9H195 1237 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 ZNF408Q9H9D4 720 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 UBP1Q9NZI7 540 aa6.24□□□□□ -1.41
BRCA1-212ENST00000473961 ZBTB42B2RXF5 422 aa6.23□□□□□ -1.41
BRCA1-212ENST00000473961 IGLV1-40P01703 118 aa6.23□□□□□ -1.41
BRCA1-212ENST00000473961 TFE3P19532 575 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-212ENST00000473961 FBLN7Q53RD9 439 aa6.23□□□□□ -1.41
BRCA1-212ENST00000473961 FAM117BQ6P1L5 589 aa6.23□□□□□ -1.41
BRCA1-212ENST00000473961 ANKS3Q6ZW76 656 aa6.23□□□□□ -1.41
BRCA1-212ENST00000473961 SULF2Q8IWU5 870 aa6.23□□□□□ -1.41
BRCA1-212ENST00000473961 HHIPQ96QV1 700 aa6.23□□□□□ -1.41
BRCA1-212ENST00000473961 ADAM19Q9H013 955 aa6.23□□□□□ -1.41
BRCA1-212ENST00000473961 SMG9Q9H0W8 520 aaKnown RBP6.23□□□□□ -1.41
BRCA1-212ENST00000473961 CBX8Q9HC52 389 aa6.23□□□□□ -1.41
BRCA1-212ENST00000473961 NAGPAQ9UK23 515 aa6.23□□□□□ -1.41
BRCA1-212ENST00000473961 GARTP22102 1010 aa6.22□□□□□ -1.41
BRCA1-212ENST00000473961 MCM4P33991 863 aa6.22□□□□□ -1.41
BRCA1-212ENST00000473961 EIF6P56537 245 aaKnown RBP6.22□□□□□ -1.41
BRCA1-212ENST00000473961 FAAP100Q0VG06 881 aa6.22□□□□□ -1.41
BRCA1-212ENST00000473961 IKBKEQ14164 716 aa6.22□□□□□ -1.41
BRCA1-212ENST00000473961 BMS1Q14692 1282 aaKnown RBP6.22□□□□□ -1.41
BRCA1-212ENST00000473961 SEZ6Q53EL9 994 aa6.22□□□□□ -1.41
BRCA1-212ENST00000473961 PSAPL1Q6NUJ1 521 aa6.22□□□□□ -1.41
BRCA1-212ENST00000473961 DTX1Q86Y01 620 aa6.22□□□□□ -1.41
BRCA1-212ENST00000473961 TTC9Q92623 222 aa6.22□□□□□ -1.41
BRCA1-212ENST00000473961 ANAPC16Q96DE5 110 aa6.22□□□□□ -1.41
BRCA1-212ENST00000473961 PRKAG3Q9UGI9 489 aa6.22□□□□□ -1.41
BRCA1-212ENST00000473961 SOX13Q9UN79 622 aa6.22□□□□□ -1.41
BRCA1-212ENST00000473961 PAGE1O75459 146 aa6.21□□□□□ -1.42
BRCA1-212ENST00000473961 RGS9O75916 674 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-212ENST00000473961 CDK11BP21127 795 aaKnown RBP6.21□□□□□ -1.42
BRCA1-212ENST00000473961 ARNTP27540 789 aa6.21□□□□□ -1.42
BRCA1-212ENST00000473961 CDC27P30260 824 aa6.21□□□□□ -1.42
BRCA1-212ENST00000473961 HP1BP3Q5SSJ5 553 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-212ENST00000473961 PERM1Q5SV97 790 aa6.21□□□□□ -1.42
BRCA1-212ENST00000473961 MSL1Q68DK7 614 aa6.21□□□□□ -1.42
BRCA1-212ENST00000473961 IGF2-ASQ6U949 168 aa6.21□□□□□ -1.42
BRCA1-212ENST00000473961 SPOCD1Q6ZMY3 1216 aa6.21□□□□□ -1.42
BRCA1-212ENST00000473961 LRP10Q7Z4F1 713 aa6.21□□□□□ -1.42
BRCA1-212ENST00000473961 ZDHHC13Q8IUH4 622 aa6.21□□□□□ -1.42
BRCA1-212ENST00000473961 REXO1Q8N1G1 1221 aaKnown RBP6.21□□□□□ -1.42
BRCA1-212ENST00000473961 JARID2Q92833 1246 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-212ENST00000473961 SOX17Q9H6I2 414 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-212ENST00000473961 CDK11AQ9UQ88 783 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-212ENST00000473961 ANKRD62A6NC57 917 aa6.2□□□□□ -1.42
BRCA1-212ENST00000473961 H3BRJ5 948 aa6.2□□□□□ -1.42
BRCA1-212ENST00000473961 GSC2O15499 205 aa6.2□□□□□ -1.42
BRCA1-212ENST00000473961 TRIM37O94972 964 aa6.2□□□□□ -1.42
BRCA1-212ENST00000473961 F13A1P00488 732 aa6.2□□□□□ -1.42
BRCA1-212ENST00000473961 ZNF157P51786 506 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-212ENST00000473961 RAB33AQ14088 237 aa6.2□□□□□ -1.42
BRCA1-212ENST00000473961 MLECQ14165 292 aa6.2□□□□□ -1.42
BRCA1-212ENST00000473961 FBXW10Q5XX13 1052 aa6.2□□□□□ -1.42
BRCA1-212ENST00000473961 SDE2Q6IQ49 451 aa6.2□□□□□ -1.42
BRCA1-212ENST00000473961 REC114Q7Z4M0 266 aa6.2□□□□□ -1.42
BRCA1-212ENST00000473961 WNT8BQ93098 351 aa6.2□□□□□ -1.42
BRCA1-212ENST00000473961 SRPK1Q96SB4 655 aaKnown RBP6.2□□□□□ -1.42
BRCA1-212ENST00000473961 LACRTQ9GZZ8 138 aa6.2□□□□□ -1.42
BRCA1-212ENST00000473961 MRVI1Q9Y6F6 885 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms