RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 BTBD19C9JJ37 291 aa15.91■□□□□ 0.14
SHROOM3-204ENST00000473602 CETPP11597 493 aa15.91■□□□□ 0.14
SHROOM3-204ENST00000473602 LACTBP83111 547 aaPredicted RBP15.91■□□□□ 0.14
SHROOM3-204ENST00000473602 KIF22Q14807 665 aa15.91■□□□□ 0.14
SHROOM3-204ENST00000473602 CCDC158Q5M9N0 1113 aa15.91■□□□□ 0.14
SHROOM3-204ENST00000473602 SLF2Q8IX21 1173 aa15.91■□□□□ 0.14
SHROOM3-204ENST00000473602 MAST2Q6P0Q8 1798 aa15.9■□□□□ 0.14
SHROOM3-204ENST00000473602 RPAP1Q9BWH6 1393 aaPredicted RBP15.9■□□□□ 0.14
SHROOM3-204ENST00000473602 RANBP2P49792 3224 aaKnown RBP15.9■□□□□ 0.14
SHROOM3-204ENST00000473602 ECM2O94769 699 aaPredicted RBP15.9■□□□□ 0.14
SHROOM3-204ENST00000473602 CACNB3P54284 484 aa15.9■□□□□ 0.14
SHROOM3-204ENST00000473602 FAM83AQ86UY5 434 aa15.9■□□□□ 0.14
SHROOM3-204ENST00000473602 ERO1BQ86YB8 467 aa15.9■□□□□ 0.14
SHROOM3-204ENST00000473602 SPATA5Q8NB90 893 aa15.9■□□□□ 0.14
SHROOM3-204ENST00000473602 ZKSCAN4Q969J2 545 aaPredicted RBP15.9■□□□□ 0.14
SHROOM3-204ENST00000473602 ZNF512BQ96KM6 892 aaPredicted RBP15.9■□□□□ 0.14
SHROOM3-204ENST00000473602 HMG20BQ9P0W2 317 aa15.9■□□□□ 0.14
SHROOM3-204ENST00000473602 DAGLAQ9Y4D2 1042 aa15.9■□□□□ 0.14
SHROOM3-204ENST00000473602 SNCAIPQ9Y6H5 919 aa15.9■□□□□ 0.14
SHROOM3-204ENST00000473602 RBBP6Q7Z6E9 1792 aaKnown RBP15.9■□□□□ 0.14
SHROOM3-204ENST00000473602 OTOFQ9HC10 1997 aa15.89■□□□□ 0.13
SHROOM3-204ENST00000473602 IRF6O14896 467 aa15.89■□□□□ 0.13
SHROOM3-204ENST00000473602 DIXDC1Q155Q3 683 aa15.89■□□□□ 0.13
SHROOM3-204ENST00000473602 C20orf194Q5TEA3 1177 aa15.89■□□□□ 0.13
SHROOM3-204ENST00000473602 DZIP1Q86YF9 867 aaKnown RBP15.89■□□□□ 0.13
SHROOM3-204ENST00000473602 WRNIP1Q96S55 665 aa15.89■□□□□ 0.13
SHROOM3-204ENST00000473602 ABCF2Q9UG63 623 aa15.89■□□□□ 0.13
SHROOM3-204ENST00000473602 EXOC6BQ9Y2D4 811 aa15.89■□□□□ 0.13
SHROOM3-204ENST00000473602 GAKO14976 1311 aa15.89■□□□□ 0.13
SHROOM3-204ENST00000473602 IGSF3O75054 1194 aa15.88■□□□□ 0.13
SHROOM3-204ENST00000473602 GNRH1P01148 92 aa15.88■□□□□ 0.13
SHROOM3-204ENST00000473602 MCAMP43121 646 aa15.88■□□□□ 0.13
SHROOM3-204ENST00000473602 SNAPC2Q13487 334 aa15.88■□□□□ 0.13
SHROOM3-204ENST00000473602 MTFR1Q15390 333 aa15.88■□□□□ 0.13
SHROOM3-204ENST00000473602 TTC39AQ5SRH9 613 aa15.88■□□□□ 0.13
SHROOM3-204ENST00000473602 CHRDL2Q6WN34 429 aa15.88■□□□□ 0.13
SHROOM3-204ENST00000473602 ERICH6Q7L0X2 663 aa15.88■□□□□ 0.13
SHROOM3-204ENST00000473602 DPF3Q92784 378 aa15.88■□□□□ 0.13
SHROOM3-204ENST00000473602 HOOK2Q96ED9 719 aa15.88■□□□□ 0.13
SHROOM3-204ENST00000473602 FAM163AQ96GL9 167 aaPredicted RBP15.88■□□□□ 0.13
SHROOM3-204ENST00000473602 DBNDD2Q9BQY9 259 aa15.88■□□□□ 0.13
SHROOM3-204ENST00000473602 ZCCHC17Q9NP64 241 aaKnown RBP15.88■□□□□ 0.13
SHROOM3-204ENST00000473602 PRMT2P55345 433 aa15.87■□□□□ 0.13
SHROOM3-204ENST00000473602 C17orf99Q6UX52 265 aa15.87■□□□□ 0.13
SHROOM3-204ENST00000473602 EAF2Q96CJ1 260 aaPredicted RBP15.87■□□□□ 0.13
SHROOM3-204ENST00000473602 YTHDC1Q96MU7 727 aaKnown RBP15.87■□□□□ 0.13
SHROOM3-204ENST00000473602 AK9Q5TCS8 1911 aa15.87■□□□□ 0.13
SHROOM3-204ENST00000473602 RAB11FIP3O75154 756 aa15.86■□□□□ 0.13
SHROOM3-204ENST00000473602 CTGFP29279 349 aa15.86■□□□□ 0.13
SHROOM3-204ENST00000473602 PSMC4P43686 418 aa15.86■□□□□ 0.13
SHROOM3-204ENST00000473602 GSTO1P78417 241 aa15.86■□□□□ 0.13
SHROOM3-204ENST00000473602 PPIL2Q13356 520 aa15.86■□□□□ 0.13
SHROOM3-204ENST00000473602 CDC42EP5Q6NZY7 148 aa15.86■□□□□ 0.13
SHROOM3-204ENST00000473602 PI16Q6UXB8 463 aa15.86■□□□□ 0.13
SHROOM3-204ENST00000473602 SIRT2Q8IXJ6 389 aa15.86■□□□□ 0.13
SHROOM3-204ENST00000473602 RHPN1Q8TCX5 695 aa15.86■□□□□ 0.13
SHROOM3-204ENST00000473602 KIF1BPQ96EK5 621 aa15.86■□□□□ 0.13
SHROOM3-204ENST00000473602 RBM27Q9P2N5 1060 aaKnown RBP15.86■□□□□ 0.13
SHROOM3-204ENST00000473602 CPA4Q9UI42 421 aa15.86■□□□□ 0.13
SHROOM3-204ENST00000473602 DBNLQ9UJU6 430 aaKnown RBP15.86■□□□□ 0.13
SHROOM3-204ENST00000473602 DOCK2Q92608 1830 aa15.85■□□□□ 0.13
SHROOM3-204ENST00000473602 MYO5AQ9Y4I1 1855 aaKnown RBP15.85■□□□□ 0.13
SHROOM3-204ENST00000473602 LDHCP07864 332 aa15.85■□□□□ 0.13
SHROOM3-204ENST00000473602 MECOMQ03112 1051 aa15.85■□□□□ 0.13
SHROOM3-204ENST00000473602 MIGA2Q7L4E1 593 aa15.85■□□□□ 0.13
SHROOM3-204ENST00000473602 FAM151AQ8WW52 585 aa15.85■□□□□ 0.13
SHROOM3-204ENST00000473602 SHISA4Q96DD7 197 aa15.85■□□□□ 0.13
SHROOM3-204ENST00000473602 TRIM47Q96LD4 638 aa15.85■□□□□ 0.13
SHROOM3-204ENST00000473602 SRRDQ9UH36 339 aa15.85■□□□□ 0.13
SHROOM3-204ENST00000473602 MROH7-TTC4A0A0A0MT08 1334 aa15.85■□□□□ 0.13
SHROOM3-204ENST00000473602 MAP4K4O95819 1239 aaPredicted RBP15.84■□□□□ 0.13
SHROOM3-204ENST00000473602 RRP1P56182 461 aaKnown RBP15.84■□□□□ 0.13
SHROOM3-204ENST00000473602 DCAF15Q66K64 600 aa15.84■□□□□ 0.13
SHROOM3-204ENST00000473602 AACSQ86V21 672 aa15.84■□□□□ 0.13
SHROOM3-204ENST00000473602 CLASRPQ8N2M8 674 aaKnown RBP15.84■□□□□ 0.13
SHROOM3-204ENST00000473602 RAET1EQ8TD07 263 aa15.84■□□□□ 0.13
SHROOM3-204ENST00000473602 CCDC8Q9H0W5 538 aaPredicted RBP15.84■□□□□ 0.13
SHROOM3-204ENST00000473602 USP40Q9NVE5 1235 aa15.84■□□□□ 0.13
SHROOM3-204ENST00000473602 LRP2BPQ9P2M1 347 aa15.84■□□□□ 0.13
SHROOM3-204ENST00000473602 RFX7Q2KHR2 1363 aa15.84■□□□□ 0.13
SHROOM3-204ENST00000473602 GPR75-ASB3A0A0A6YYF3 556 aa15.83■□□□□ 0.12
SHROOM3-204ENST00000473602 FMNL1O95466 1100 aaPredicted RBP15.83■□□□□ 0.12
SHROOM3-204ENST00000473602 OSBPP22059 807 aa15.83■□□□□ 0.12
SHROOM3-204ENST00000473602 HOXD10P28358 340 aa15.83■□□□□ 0.12
SHROOM3-204ENST00000473602 INPP5BP32019 993 aa15.83■□□□□ 0.12
SHROOM3-204ENST00000473602 PPATQ06203 517 aa15.83■□□□□ 0.12
SHROOM3-204ENST00000473602 NKX2-3Q8TAU0 364 aa15.83■□□□□ 0.12
SHROOM3-204ENST00000473602 NSUN4Q96CB9 384 aaKnown RBP15.83■□□□□ 0.12
SHROOM3-204ENST00000473602 IDI2Q9BXS1 227 aa15.83■□□□□ 0.12
SHROOM3-204ENST00000473602 TLR7Q9NYK1 1049 aaKnown RBP15.83■□□□□ 0.12
SHROOM3-204ENST00000473602 RAI14Q9P0K7 980 aa15.83■□□□□ 0.12
SHROOM3-204ENST00000473602 PDHXO00330 501 aa15.82■□□□□ 0.12
SHROOM3-204ENST00000473602 ENTPD3O75355 529 aa15.82■□□□□ 0.12
SHROOM3-204ENST00000473602 GRK4P32298 578 aa15.82■□□□□ 0.12
SHROOM3-204ENST00000473602 BTDP43251 543 aa15.82■□□□□ 0.12
SHROOM3-204ENST00000473602 GJA8P48165 433 aa15.82■□□□□ 0.12
SHROOM3-204ENST00000473602 TBC1D9Q6ZT07 1266 aa15.82■□□□□ 0.12
SHROOM3-204ENST00000473602 ANKRD23Q86SG2 305 aa15.82■□□□□ 0.12
SHROOM3-204ENST00000473602 ZNF384Q8TF68 577 aa15.82■□□□□ 0.12
SHROOM3-204ENST00000473602 ZNF341Q9BYN7 854 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms