RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 RBBP6Q7Z6E9 1792 aaKnown RBP22.12■■□□□ 1.13
SNX4-204ENST00000473417 MROH7-TTC4A0A0A0MT08 1334 aa22.12■■□□□ 1.13
SNX4-204ENST00000473417 PI16Q6UXB8 463 aa22.12■■□□□ 1.13
SNX4-204ENST00000473417 MIGA2Q7L4E1 593 aa22.12■■□□□ 1.13
SNX4-204ENST00000473417 ZNF384Q8TF68 577 aa22.12■■□□□ 1.13
SNX4-204ENST00000473417 EAF2Q96CJ1 260 aaPredicted RBP22.12■■□□□ 1.13
SNX4-204ENST00000473417 DBNDD2Q9BQY9 259 aa22.12■■□□□ 1.13
SNX4-204ENST00000473417 BCL11AQ9H165 835 aa22.12■■□□□ 1.13
SNX4-204ENST00000473417 IL1RAPL2Q9NP60 686 aa22.12■■□□□ 1.13
SNX4-204ENST00000473417 ZNF112Q9UJU3 913 aa22.12■■□□□ 1.13
SNX4-204ENST00000473417 ZSWIM8A7E2V4 1837 aa22.12■■□□□ 1.13
SNX4-204ENST00000473417 INPP5BP32019 993 aa22.11■■□□□ 1.13
SNX4-204ENST00000473417 PPIL2Q13356 520 aa22.11■■□□□ 1.13
SNX4-204ENST00000473417 ERICH6Q7L0X2 663 aa22.11■■□□□ 1.13
SNX4-204ENST00000473417 SPATA5Q8NB90 893 aa22.11■■□□□ 1.13
SNX4-204ENST00000473417 EXOC6Q8TAG9 804 aa22.11■■□□□ 1.13
SNX4-204ENST00000473417 CCDC8Q9H0W5 538 aaPredicted RBP22.11■■□□□ 1.13
SNX4-204ENST00000473417 RAB11FIP3O75154 756 aa22.1■■□□□ 1.13
SNX4-204ENST00000473417 ENTPD3O75355 529 aa22.1■■□□□ 1.13
SNX4-204ENST00000473417 MCAMP43121 646 aa22.1■■□□□ 1.13
SNX4-204ENST00000473417 CENPFP49454 3210 aa22.1■■□□□ 1.13
SNX4-204ENST00000473417 RGS3P49796 1198 aa22.1■■□□□ 1.13
SNX4-204ENST00000473417 SOX10P56693 466 aa22.1■■□□□ 1.13
SNX4-204ENST00000473417 IRX6P78412 446 aaPredicted RBP22.1■■□□□ 1.13
SNX4-204ENST00000473417 MECOMQ03112 1051 aa22.1■■□□□ 1.13
SNX4-204ENST00000473417 ZFPM1Q8IX07 1006 aa22.1■■□□□ 1.13
SNX4-204ENST00000473417 KIF1BPQ96EK5 621 aa22.1■■□□□ 1.13
SNX4-204ENST00000473417 IRF6O14896 467 aa22.09■■□□□ 1.13
SNX4-204ENST00000473417 UQCRFS1P1P0C7P4 283 aa22.09■■□□□ 1.13
SNX4-204ENST00000473417 BTDP43251 543 aa22.09■■□□□ 1.13
SNX4-204ENST00000473417 AACSQ86V21 672 aa22.09■■□□□ 1.13
SNX4-204ENST00000473417 FAM43AQ8N2R8 423 aa22.09■■□□□ 1.13
SNX4-204ENST00000473417 ERO1AQ96HE7 468 aa22.09■■□□□ 1.13
SNX4-204ENST00000473417 TLR7Q9NYK1 1049 aaKnown RBP22.09■■□□□ 1.13
SNX4-204ENST00000473417 PDE4DIPQ5VU43 2346 aa22.09■■□□□ 1.13
SNX4-204ENST00000473417 SIPA1L1O43166 1804 aa22.08■■□□□ 1.13
SNX4-204ENST00000473417 WDHD1O75717 1129 aaPredicted RBP22.08■■□□□ 1.13
SNX4-204ENST00000473417 CETPP11597 493 aa22.08■■□□□ 1.13
SNX4-204ENST00000473417 PPATQ06203 517 aa22.08■■□□□ 1.13
SNX4-204ENST00000473417 TAF1CQ15572 869 aaPredicted RBP22.08■■□□□ 1.13
SNX4-204ENST00000473417 NOL9Q5SY16 702 aaKnown RBP22.08■■□□□ 1.13
SNX4-204ENST00000473417 OTOP1Q7RTM1 612 aa22.08■■□□□ 1.13
SNX4-204ENST00000473417 ZCCHC17Q9NP64 241 aaKnown RBP22.08■■□□□ 1.13
SNX4-204ENST00000473417 DBNLQ9UJU6 430 aaKnown RBP22.08■■□□□ 1.13
SNX4-204ENST00000473417 GPR75-ASB3A0A0A6YYF3 556 aa22.07■■□□□ 1.12
SNX4-204ENST00000473417 RHBDL3P58872 404 aa22.07■■□□□ 1.12
SNX4-204ENST00000473417 SNAPC2Q13487 334 aa22.07■■□□□ 1.12
SNX4-204ENST00000473417 CCDC158Q5M9N0 1113 aa22.07■■□□□ 1.12
SNX4-204ENST00000473417 TTC39AQ5SRH9 613 aa22.07■■□□□ 1.12
SNX4-204ENST00000473417 SH3BP5LQ7L8J4 393 aa22.07■■□□□ 1.12
SNX4-204ENST00000473417 CLASRPQ8N2M8 674 aaKnown RBP22.07■■□□□ 1.12
SNX4-204ENST00000473417 CD99L2Q8TCZ2 262 aa22.07■■□□□ 1.12
SNX4-204ENST00000473417 NSUN4Q96CB9 384 aaKnown RBP22.07■■□□□ 1.12
SNX4-204ENST00000473417 DCTPP1Q9H773 170 aa22.07■■□□□ 1.12
SNX4-204ENST00000473417 DDX4Q9NQI0 724 aaKnown RBP22.07■■□□□ 1.12
SNX4-204ENST00000473417 TRIM17Q9Y577 477 aa22.07■■□□□ 1.12
SNX4-204ENST00000473417 COL2A1P02458 1487 aaPredicted RBP22.07■■□□□ 1.12
SNX4-204ENST00000473417 GSTO1P78417 241 aa22.06■■□□□ 1.12
SNX4-204ENST00000473417 SP3Q02447 781 aa22.06■■□□□ 1.12
SNX4-204ENST00000473417 TBC1D9Q6ZT07 1266 aa22.06■■□□□ 1.12
SNX4-204ENST00000473417 ZFYVE28Q9HCC9 887 aa22.06■■□□□ 1.12
SNX4-204ENST00000473417 AAMPQ13685 434 aa22.05■■□□□ 1.12
SNX4-204ENST00000473417 KCNH4Q9UQ05 1017 aa22.05■■□□□ 1.12
SNX4-204ENST00000473417 MGAMO43451 1857 aa22.05■■□□□ 1.12
SNX4-204ENST00000473417 DDTLA6NHG4 134 aaPredicted RBP22.04■■□□□ 1.12
SNX4-204ENST00000473417 PHF20L1A8MW92 1017 aa22.04■■□□□ 1.12
SNX4-204ENST00000473417 BTBD19C9JJ37 291 aa22.04■■□□□ 1.12
SNX4-204ENST00000473417 SMARCA5O60264 1052 aaPredicted RBP22.04■■□□□ 1.12
SNX4-204ENST00000473417 LDHCP07864 332 aa22.04■■□□□ 1.12
SNX4-204ENST00000473417 CAP1Q01518 475 aa22.04■■□□□ 1.12
SNX4-204ENST00000473417 MAP3K10Q02779 954 aa22.04■■□□□ 1.12
SNX4-204ENST00000473417 PICALMQ13492 652 aa22.04■■□□□ 1.12
SNX4-204ENST00000473417 LRRCC1Q9C099 1032 aa22.04■■□□□ 1.12
SNX4-204ENST00000473417 RAI14Q9P0K7 980 aa22.04■■□□□ 1.12
SNX4-204ENST00000473417 NPM3O75607 178 aaKnown RBP22.03■■□□□ 1.12
SNX4-204ENST00000473417 MAP4K4O95819 1239 aaPredicted RBP22.03■■□□□ 1.12
SNX4-204ENST00000473417 IFIT2P09913 472 aaKnown RBP22.03■■□□□ 1.12
SNX4-204ENST00000473417 ZSCAN29Q8IWY8 852 aaPredicted RBP22.03■■□□□ 1.12
SNX4-204ENST00000473417 ZNF512BQ96KM6 892 aaPredicted RBP22.03■■□□□ 1.12
SNX4-204ENST00000473417 SNRKQ9NRH2 765 aa22.03■■□□□ 1.12
SNX4-204ENST00000473417 LOC285556D6RIA3 1793 aa22.02■■□□□ 1.12
SNX4-204ENST00000473417 EFCC1Q9HA90 598 aa22.02■■□□□ 1.12
SNX4-204ENST00000473417 LRP2BPQ9P2M1 347 aa22.02■■□□□ 1.12
SNX4-204ENST00000473417 TLR2O60603 784 aa22.01■■□□□ 1.11
SNX4-204ENST00000473417 SCYL3Q8IZE3 742 aa22.01■■□□□ 1.11
SNX4-204ENST00000473417 PTPN22Q9Y2R2 807 aa22.01■■□□□ 1.11
SNX4-204ENST00000473417 MYH1P12882 1939 aa22.01■■□□□ 1.11
SNX4-204ENST00000473417 CYP2E1P05181 493 aaPredicted RBP22■■□□□ 1.11
SNX4-204ENST00000473417 MOGSQ13724 837 aa22■■□□□ 1.11
SNX4-204ENST00000473417 ANKRD23Q86SG2 305 aa22■■□□□ 1.11
SNX4-204ENST00000473417 SLURP2P0DP57 97 aa21.99■■□□□ 1.11
SNX4-204ENST00000473417 HDAC1Q13547 482 aaPredicted RBP21.99■■□□□ 1.11
SNX4-204ENST00000473417 BRCA2P51587 3418 aa21.98■■□□□ 1.11
SNX4-204ENST00000473417 CXCL11O14625 94 aa21.98■■□□□ 1.11
SNX4-204ENST00000473417 NAA16Q6N069 864 aaPredicted RBP21.98■■□□□ 1.11
SNX4-204ENST00000473417 OSBPL5Q9H0X9 879 aaPredicted RBP21.98■■□□□ 1.11
SNX4-204ENST00000473417 ADGRA2Q96PE1 1338 aa21.98■■□□□ 1.11
SNX4-204ENST00000473417 TBC1D12O60347 775 aa21.97■■□□□ 1.11
SNX4-204ENST00000473417 CTNND1O60716 968 aaKnown RBP21.97■■□□□ 1.11
SNX4-204ENST00000473417 IGSF3O75054 1194 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms