RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 TMEM95Q3KNT9 176 aa7.39□□□□□ -1.23
RTF1-203ENST00000473214 SAMD5Q5TGI4 173 aa7.39□□□□□ -1.23
RTF1-203ENST00000473214 SLC4A10Q6U841 1118 aa7.39□□□□□ -1.23
RTF1-203ENST00000473214 HDGFL2Q7Z4V5 671 aaPredicted RBP7.39□□□□□ -1.23
RTF1-203ENST00000473214 SIX5Q8N196 739 aa7.39□□□□□ -1.23
RTF1-203ENST00000473214 CITED4Q96RK1 184 aa7.39□□□□□ -1.23
RTF1-203ENST00000473214 FEZ1Q99689 392 aa7.39□□□□□ -1.23
RTF1-203ENST00000473214 HINFPQ9BQA5 517 aa7.39□□□□□ -1.23
RTF1-203ENST00000473214 KIAA1024Q9UPX6 916 aa7.39□□□□□ -1.23
RTF1-203ENST00000473214 ATP8A1Q9Y2Q0 1164 aa7.39□□□□□ -1.23
RTF1-203ENST00000473214 WRNQ14191 1432 aaPredicted RBP eCLIP7.38□□□□□ -1.23
RTF1-203ENST00000473214 GOLGA6CA6NDK9 693 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 GOLGA6BA6NDN3 693 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 TTC36A6NLP5 189 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 SFI1A8K8P3 1242 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 EFSO43281 561 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 DKK1O94907 266 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 SCGB1D2O95969 90 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 CTSHP09668 335 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 GOLGA6DP0CG33 693 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 TATP17735 454 aaPredicted RBP7.38□□□□□ -1.23
RTF1-203ENST00000473214 MPSTP25325 297 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 MZF1P28698 734 aaPredicted RBP7.38□□□□□ -1.23
RTF1-203ENST00000473214 ALG1LQ6GMV1 187 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 C16orf86Q6ZW13 317 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 IFNL3Q8IZI9 196 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 TTC30BQ8N4P2 665 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 CCDC89Q8N998 374 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 TPCN2Q8NHX9 752 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 E2F7Q96AV8 911 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 TSPAN18Q96SJ8 248 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 MDFIQ99750 246 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 CCDC87Q9NVE4 849 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 GOLGA6AQ9NYA3 693 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 SERTAD1Q9UHV2 236 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 NOL7Q9UMY1 257 aaKnown RBP7.38□□□□□ -1.23
RTF1-203ENST00000473214 USP3Q9Y6I4 520 aa7.38□□□□□ -1.23
RTF1-203ENST00000473214 SPATA31D1Q6ZQQ2 1576 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 PNMA6FA0A0J9YX94 578 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 A6NJY4 79 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 SLC26A4O43511 780 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 MYL3P08590 195 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 NPR3P17342 541 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 FKBP5Q13451 457 aaPredicted RBP7.37□□□□□ -1.23
RTF1-203ENST00000473214 LAMC2Q13753 1193 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 RAB33AQ14088 237 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 AXDND1Q5T1B0 1012 aaPredicted RBP7.37□□□□□ -1.23
RTF1-203ENST00000473214 ARTNQ5T4W7 220 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 ACBD5Q5T8D3 534 aaPredicted RBP7.37□□□□□ -1.23
RTF1-203ENST00000473214 CCDC70Q6NSX1 233 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 KRT26Q7Z3Y9 468 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 MYO1HQ8N1T3 1032 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 LILRB2Q8N423 598 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 TRPM4Q8TD43 1214 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 DNAJC7Q99615 494 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 IFT122Q9HBG6 1241 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 STRN4Q9NRL3 753 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 MRVI1Q9Y6F6 885 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 BIVM-ERCC5R4GMW8 1640 aa7.37□□□□□ -1.23
RTF1-203ENST00000473214 PCF11O94913 1555 aaKnown RBP7.37□□□□□ -1.23
RTF1-203ENST00000473214 PTPRMP28827 1452 aa7.36□□□□□ -1.23
RTF1-203ENST00000473214 SHTN1A0MZ66 631 aa7.36□□□□□ -1.23
RTF1-203ENST00000473214 GOLIM4O00461 696 aa7.36□□□□□ -1.23
RTF1-203ENST00000473214 GPR182O15218 404 aa7.36□□□□□ -1.23
RTF1-203ENST00000473214 ETFBP38117 255 aa7.36□□□□□ -1.23
RTF1-203ENST00000473214 LRP10Q7Z4F1 713 aa7.36□□□□□ -1.23
RTF1-203ENST00000473214 NGDNQ8NEJ9 315 aaKnown RBP7.36□□□□□ -1.23
RTF1-203ENST00000473214 HNRNPLLQ8WVV9 542 aaKnown RBP7.36□□□□□ -1.23
RTF1-203ENST00000473214 ZNF622Q969S3 477 aaKnown RBP eCLIP7.36□□□□□ -1.237e-7■□□□□ 10.4
RTF1-203ENST00000473214 PTPRHQ9HD43 1115 aa7.36□□□□□ -1.23
RTF1-203ENST00000473214 ZFP64Q9NPA5 681 aa7.36□□□□□ -1.23
RTF1-203ENST00000473214 TPSG1Q9NRR2 321 aa7.36□□□□□ -1.23
RTF1-203ENST00000473214 MARK1Q9P0L2 795 aa7.36□□□□□ -1.23
RTF1-203ENST00000473214 PLB1Q6P1J6 1458 aa7.36□□□□□ -1.23
RTF1-203ENST00000473214 ADAMTSL3P82987 1691 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 ELOA3CA0A087WX78 387 aaPredicted RBP7.35□□□□□ -1.23
RTF1-203ENST00000473214 BICDL2A1A5D9 508 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 ELOA3DA6NLF2 546 aaPredicted RBP7.35□□□□□ -1.23
RTF1-203ENST00000473214 CLGNO14967 610 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 KLF4O43474 513 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 DYRK3O43781 588 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 RNASEH2AO75792 299 aaKnown RBP7.35□□□□□ -1.23
RTF1-203ENST00000473214 CASP2P42575 452 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 TKFCQ3LXA3 575 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 ELOA3BQ3SY89 546 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 GLIPR1L2Q4G1C9 344 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 NBPF11Q86T75 865 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 ELOA3Q8NG57 546 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 SEC16BQ96JE7 1060 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 FAM126AQ9BYI3 521 aaPredicted RBP7.35□□□□□ -1.23
RTF1-203ENST00000473214 TMEM260Q9NX78 707 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 CABP1Q9NZU7 370 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 R3HCC1Q9Y3T6 440 aaKnown RBP7.35□□□□□ -1.23
RTF1-203ENST00000473214 AK5Q9Y6K8 562 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 PTPRGP23470 1445 aa7.35□□□□□ -1.23
RTF1-203ENST00000473214 ZBTB7BO15156 539 aaPredicted RBP7.34□□□□□ -1.23
RTF1-203ENST00000473214 HIP1RO75146 1068 aa7.34□□□□□ -1.23
RTF1-203ENST00000473214 HSPA2P54652 639 aa7.34□□□□□ -1.23
RTF1-203ENST00000473214 SIM2Q14190 667 aaPredicted RBP7.34□□□□□ -1.23
RTF1-203ENST00000473214 SLC4A8Q2Y0W8 1093 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms