RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ATRNL1Q5VV63 1379 aa18.84■□□□□ 0.61
VTI1A-203ENST00000472892 PHF20L1A8MW92 1017 aa18.84■□□□□ 0.61
VTI1A-203ENST00000472892 BTBD19C9JJ37 291 aa18.84■□□□□ 0.61
VTI1A-203ENST00000472892 UQCRFS1P1P0C7P4 283 aa18.84■□□□□ 0.61
VTI1A-203ENST00000472892 BTDP43251 543 aa18.84■□□□□ 0.61
VTI1A-203ENST00000472892 CAP1Q01518 475 aa18.84■□□□□ 0.61
VTI1A-203ENST00000472892 PI16Q6UXB8 463 aa18.84■□□□□ 0.61
VTI1A-203ENST00000472892 TBC1D9Q6ZT07 1266 aa18.84■□□□□ 0.61
VTI1A-203ENST00000472892 SH3BP5LQ7L8J4 393 aa18.84■□□□□ 0.61
VTI1A-203ENST00000472892 NSUN4Q96CB9 384 aaKnown RBP18.84■□□□□ 0.61
VTI1A-203ENST00000472892 EFCC1Q9HA90 598 aa18.84■□□□□ 0.61
VTI1A-203ENST00000472892 KCNH4Q9UQ05 1017 aa18.84■□□□□ 0.61
VTI1A-203ENST00000472892 MYH2Q9UKX2 1941 aa18.83■□□□□ 0.6
VTI1A-203ENST00000472892 TLR2O60603 784 aa18.83■□□□□ 0.6
VTI1A-203ENST00000472892 SURF6O75683 361 aaKnown RBP18.83■□□□□ 0.6
VTI1A-203ENST00000472892 MCAMP43121 646 aa18.83■□□□□ 0.6
VTI1A-203ENST00000472892 RHBDL3P58872 404 aa18.83■□□□□ 0.6
VTI1A-203ENST00000472892 ITPRIPQ8IWB1 547 aa18.83■□□□□ 0.6
VTI1A-203ENST00000472892 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.83■□□□□ 0.6
VTI1A-203ENST00000472892 C1orf115Q9H7X2 142 aa18.83■□□□□ 0.6
VTI1A-203ENST00000472892 DDX4Q9NQI0 724 aaKnown RBP18.83■□□□□ 0.6
VTI1A-203ENST00000472892 NOP58Q9Y2X3 529 aaKnown RBP18.83■□□□□ 0.6
VTI1A-203ENST00000472892 DDTLA6NHG4 134 aaPredicted RBP18.82■□□□□ 0.6
VTI1A-203ENST00000472892 MAP4K4O95819 1239 aaPredicted RBP18.82■□□□□ 0.6
VTI1A-203ENST00000472892 LDHCP07864 332 aa18.82■□□□□ 0.6
VTI1A-203ENST00000472892 GSTO1P78417 241 aa18.82■□□□□ 0.6
VTI1A-203ENST00000472892 ARHGEF6Q15052 776 aa18.82■□□□□ 0.6
VTI1A-203ENST00000472892 TNNI3KQ59H18 835 aa18.82■□□□□ 0.6
VTI1A-203ENST00000472892 FPGT-TNNI3KV9GXZ4 949 aa18.82■□□□□ 0.6
VTI1A-203ENST00000472892 MOGSQ13724 837 aa18.81■□□□□ 0.6
VTI1A-203ENST00000472892 ANKRD23Q86SG2 305 aa18.81■□□□□ 0.6
VTI1A-203ENST00000472892 ZSCAN29Q8IWY8 852 aaPredicted RBP18.81■□□□□ 0.6
VTI1A-203ENST00000472892 CXCL11O14625 94 aa18.8■□□□□ 0.6
VTI1A-203ENST00000472892 OS9Q13438 667 aaPredicted RBP18.8■□□□□ 0.6
VTI1A-203ENST00000472892 CCDC158Q5M9N0 1113 aa18.8■□□□□ 0.6
VTI1A-203ENST00000472892 ZNF512BQ96KM6 892 aaPredicted RBP18.8■□□□□ 0.6
VTI1A-203ENST00000472892 DBNDD2Q9BQY9 259 aa18.8■□□□□ 0.6
VTI1A-203ENST00000472892 RAI14Q9P0K7 980 aa18.8■□□□□ 0.6
VTI1A-203ENST00000472892 LRP2BPQ9P2M1 347 aa18.8■□□□□ 0.6
VTI1A-203ENST00000472892 TNRC18O15417 2968 aaPredicted RBP18.8■□□□□ 0.6
VTI1A-203ENST00000472892 AK9Q5TCS8 1911 aa18.79■□□□□ 0.6
VTI1A-203ENST00000472892 TBC1D12O60347 775 aa18.79■□□□□ 0.6
VTI1A-203ENST00000472892 PICALMQ13492 652 aa18.79■□□□□ 0.6
VTI1A-203ENST00000472892 SCYL3Q8IZE3 742 aa18.79■□□□□ 0.6
VTI1A-203ENST00000472892 HTTP42858 3142 aa18.78■□□□□ 0.6
VTI1A-203ENST00000472892 PDHXO00330 501 aa18.78■□□□□ 0.6
VTI1A-203ENST00000472892 CTNND1O60716 968 aaKnown RBP18.78■□□□□ 0.6
VTI1A-203ENST00000472892 PTPRAP18433 802 aa18.78■□□□□ 0.6
VTI1A-203ENST00000472892 TTC39AQ5SRH9 613 aa18.78■□□□□ 0.6
VTI1A-203ENST00000472892 C17orf99Q6UX52 265 aa18.78■□□□□ 0.6
VTI1A-203ENST00000472892 ARMC5Q96C12 935 aa18.78■□□□□ 0.6
VTI1A-203ENST00000472892 PICK1Q9NRD5 415 aa18.78■□□□□ 0.6
VTI1A-203ENST00000472892 SNRKQ9NRH2 765 aa18.78■□□□□ 0.6
VTI1A-203ENST00000472892 ZHX2Q9Y6X8 837 aa18.78■□□□□ 0.6
VTI1A-203ENST00000472892 IGSF3O75054 1194 aa18.77■□□□□ 0.6
VTI1A-203ENST00000472892 SLURP2P0DP57 97 aa18.77■□□□□ 0.6
VTI1A-203ENST00000472892 LACTBP83111 547 aaPredicted RBP18.77■□□□□ 0.6
VTI1A-203ENST00000472892 CEP85Q6P2H3 762 aa18.77■□□□□ 0.6
VTI1A-203ENST00000472892 PANK1Q8TE04 598 aa18.77■□□□□ 0.6
VTI1A-203ENST00000472892 AFG3L2Q9Y4W6 797 aa18.77■□□□□ 0.6
VTI1A-203ENST00000472892 CYP2E1P05181 493 aaPredicted RBP18.76■□□□□ 0.59
VTI1A-203ENST00000472892 GPAT2Q6NUI2 795 aa18.76■□□□□ 0.59
VTI1A-203ENST00000472892 EAF2Q96CJ1 260 aaPredicted RBP18.76■□□□□ 0.59
VTI1A-203ENST00000472892 ARHGAP39Q9C0H5 1083 aa18.76■□□□□ 0.59
VTI1A-203ENST00000472892 ADGRA2Q96PE1 1338 aa18.75■□□□□ 0.59
VTI1A-203ENST00000472892 A0A0G2JLL6 359 aaPredicted RBP18.75■□□□□ 0.59
VTI1A-203ENST00000472892 GNRH1P01148 92 aa18.75■□□□□ 0.59
VTI1A-203ENST00000472892 PPP4CP60510 307 aa18.75■□□□□ 0.59
VTI1A-203ENST00000472892 KIF22Q14807 665 aa18.75■□□□□ 0.59
VTI1A-203ENST00000472892 NAA16Q6N069 864 aaPredicted RBP18.75■□□□□ 0.59
VTI1A-203ENST00000472892 FASTKD5Q7L8L6 764 aaKnown RBP18.75■□□□□ 0.59
VTI1A-203ENST00000472892 PRRT2Q7Z6L0 340 aaPredicted RBP18.75■□□□□ 0.59
VTI1A-203ENST00000472892 OSBPL5Q9H0X9 879 aaPredicted RBP18.75■□□□□ 0.59
VTI1A-203ENST00000472892 DBNLQ9UJU6 430 aaKnown RBP18.75■□□□□ 0.59
VTI1A-203ENST00000472892 COL2A1P02458 1487 aaPredicted RBP18.74■□□□□ 0.59
VTI1A-203ENST00000472892 BAG3O95817 575 aa18.74■□□□□ 0.59
VTI1A-203ENST00000472892 MS4A1P11836 297 aa18.74■□□□□ 0.59
VTI1A-203ENST00000472892 SH3RF3Q8TEJ3 882 aaPredicted RBP18.74■□□□□ 0.59
VTI1A-203ENST00000472892 CCDC8Q9H0W5 538 aaPredicted RBP18.74■□□□□ 0.59
VTI1A-203ENST00000472892 CPA4Q9UI42 421 aa18.74■□□□□ 0.59
VTI1A-203ENST00000472892 PTCH2Q9Y6C5 1203 aa18.74■□□□□ 0.59
VTI1A-203ENST00000472892 DOCK2Q92608 1830 aa18.74■□□□□ 0.59
VTI1A-203ENST00000472892 POTEFA5A3E0 1075 aa18.73■□□□□ 0.59
VTI1A-203ENST00000472892 ZAP70P43403 619 aa18.73■□□□□ 0.59
VTI1A-203ENST00000472892 SAMD1Q6SPF0 538 aaPredicted RBP18.73■□□□□ 0.59
VTI1A-203ENST00000472892 TEX11Q8IYF3 940 aa18.73■□□□□ 0.59
VTI1A-203ENST00000472892 NOL10Q9BSC4 688 aaKnown RBP18.73■□□□□ 0.59
VTI1A-203ENST00000472892 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.73■□□□□ 0.59
VTI1A-203ENST00000472892 TLR7Q9NYK1 1049 aaKnown RBP18.73■□□□□ 0.59
VTI1A-203ENST00000472892 PLCG2P16885 1265 aa18.72■□□□□ 0.59
VTI1A-203ENST00000472892 PRMT2P55345 433 aa18.72■□□□□ 0.59
VTI1A-203ENST00000472892 ADGRA1Q86SQ6 560 aa18.72■□□□□ 0.59
VTI1A-203ENST00000472892 NBPF11Q86T75 865 aa18.72■□□□□ 0.59
VTI1A-203ENST00000472892 ZNF333Q96JL9 665 aa18.72■□□□□ 0.59
VTI1A-203ENST00000472892 PARK7Q99497 189 aaKnown RBP18.72■□□□□ 0.59
VTI1A-203ENST00000472892 PIH1D3Q9NQM4 214 aaKnown RBP18.72■□□□□ 0.59
VTI1A-203ENST00000472892 AATFQ9NY61 560 aaKnown RBP eCLIP18.72■□□□□ 0.59
VTI1A-203ENST00000472892 SLC45A1Q9Y2W3 748 aa18.72■□□□□ 0.59
VTI1A-203ENST00000472892 CENPFP49454 3210 aa18.72■□□□□ 0.59
VTI1A-203ENST00000472892 FAM196BA6NMK8 535 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms