RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 TMPRSS13Q9BYE2 586 aa7.62□□□□□ -1.19
PRPF40A-208ENST00000472760 EFR3BQ9Y2G0 817 aa7.62□□□□□ -1.19
PRPF40A-208ENST00000472760 SNCAIPQ9Y6H5 919 aa7.62□□□□□ -1.19
PRPF40A-208ENST00000472760 DCDC2CA8MYV0 355 aa7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 SELPP16109 830 aa7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 NASPP49321 788 aaPredicted RBP7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 COL9A2Q14055 689 aaPredicted RBP7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 INPP5AQ14642 412 aa7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 WIPI1Q5MNZ9 446 aaPredicted RBP7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 REC114Q7Z4M0 266 aa7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 SLITRK4Q8IW52 837 aa7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 TMEM130Q8N3G9 435 aa7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 C12orf50Q8NA57 414 aaPredicted RBP7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 LENG1Q96BZ8 264 aaPredicted RBP7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 PLPPR2Q96GM1 343 aa7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 GMLQ99445 158 aa7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 GINM1Q9NU53 330 aa7.61□□□□□ -1.19
PRPF40A-208ENST00000472760 SYNGAP1Q96PV0 1343 aa7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 C9orf172C9J069 976 aa7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 F8W735 103 aaPredicted RBP7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 ATP2B1P20020 1258 aa7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 COL8A1P27658 744 aa7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 CDK8P49336 464 aa7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 ZNF165P49910 485 aa7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 NRG1Q02297 640 aaPredicted RBP7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 ID3Q02535 119 aa7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 FDX2Q6P4F2 183 aa7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 LRFN4Q6PJG9 635 aa7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 AGGF1Q8N302 714 aaeCLIP7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 BRMS1Q9HCU9 246 aa7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 PICK1Q9NRD5 415 aa7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 CSADQ9Y600 493 aa7.6□□□□□ -1.19
PRPF40A-208ENST00000472760 ZC3H12AQ5D1E8 599 aaKnown RBP7.59□□□□□ -1.19
PRPF40A-208ENST00000472760 C12orf40Q86WS4 652 aa7.59□□□□□ -1.19
PRPF40A-208ENST00000472760 SMG8Q8ND04 991 aaKnown RBP7.59□□□□□ -1.19
PRPF40A-208ENST00000472760 CPLX3Q8WVH0 158 aa7.59□□□□□ -1.19
PRPF40A-208ENST00000472760 AKTIPQ9H8T0 292 aa7.59□□□□□ -1.19
PRPF40A-208ENST00000472760 SUGCTQ9HAC7 445 aa7.59□□□□□ -1.19
PRPF40A-208ENST00000472760 AP4E1Q9UPM8 1137 aa7.59□□□□□ -1.19
PRPF40A-208ENST00000472760 GFRA2O00451 464 aa7.58□□□□□ -1.2
PRPF40A-208ENST00000472760 ALX3O95076 343 aa7.58□□□□□ -1.2
PRPF40A-208ENST00000472760 SSBP05455 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
PRPF40A-208ENST00000472760 SOX9P48436 509 aa7.58□□□□□ -1.2
PRPF40A-208ENST00000472760 SOX4Q06945 474 aaPredicted RBP7.58□□□□□ -1.2
PRPF40A-208ENST00000472760 ANKRD34AQ69YU3 496 aa7.58□□□□□ -1.2
PRPF40A-208ENST00000472760 GK5Q6ZS86 529 aa7.58□□□□□ -1.2
PRPF40A-208ENST00000472760 DYMQ7RTS9 669 aa7.58□□□□□ -1.2
PRPF40A-208ENST00000472760 ALYREFQ86V81 257 aaKnown RBP7.58□□□□□ -1.2
PRPF40A-208ENST00000472760 FERD3LQ96RJ6 166 aa7.58□□□□□ -1.2
PRPF40A-208ENST00000472760 STK17AQ9UEE5 414 aa7.58□□□□□ -1.2
PRPF40A-208ENST00000472760 PPP1R9AQ9ULJ8 1098 aa7.58□□□□□ -1.2
PRPF40A-208ENST00000472760 PRAMEF27A3QJZ7 478 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 TMPRSS2O15393 492 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 SART1O43290 800 aaKnown RBP7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 GRIN3BO60391 1043 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 ADH5P11766 374 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 DRD2P14416 443 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 ERVK-24P63145 666 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 FBXW10Q5XX13 1052 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 CYFIP1Q7L576 1253 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 MCF2L2Q86YR7 1114 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 REXO1Q8N1G1 1221 aaKnown RBP7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 CEP41Q9BYV8 373 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 ATXN3LQ9H3M9 355 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 CRIM1Q9NZV1 1036 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 STRIP2Q9ULQ0 834 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 HIF3AQ9Y2N7 669 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 POLR3KQ9Y2Y1 108 aaPredicted RBP7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 PCDHB14Q9Y5E9 798 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 PCDHGC5Q9Y5F6 944 aa7.57□□□□□ -1.2
PRPF40A-208ENST00000472760 RNF225M0QZC1 329 aaPredicted RBP7.56□□□□□ -1.2
PRPF40A-208ENST00000472760 FGRP09769 529 aa7.56□□□□□ -1.2
PRPF40A-208ENST00000472760 GLB1P16278 677 aa7.56□□□□□ -1.2
PRPF40A-208ENST00000472760 GTF2F1P35269 517 aaKnown RBP eCLIP7.56□□□□□ -1.2
PRPF40A-208ENST00000472760 IREB2P48200 963 aaKnown RBP7.56□□□□□ -1.2
PRPF40A-208ENST00000472760 CLCQ05315 142 aa7.56□□□□□ -1.2
PRPF40A-208ENST00000472760 PDE4BQ07343 736 aa7.56□□□□□ -1.2
PRPF40A-208ENST00000472760 PPM1JQ5JR12 505 aa7.56□□□□□ -1.2
PRPF40A-208ENST00000472760 WFDC12Q8WWY7 111 aa7.56□□□□□ -1.2
PRPF40A-208ENST00000472760 FANCD2OSQ96PS1 177 aa7.56□□□□□ -1.2
PRPF40A-208ENST00000472760 TACC3Q9Y6A5 838 aa7.56□□□□□ -1.2
PRPF40A-208ENST00000472760 IGSF3O75054 1194 aa7.55□□□□□ -1.2
PRPF40A-208ENST00000472760 TIAF1O95411 115 aa7.55□□□□□ -1.2
PRPF40A-208ENST00000472760 PLCG1P19174 1290 aa7.55□□□□□ -1.2
PRPF40A-208ENST00000472760 ETF1P62495 437 aaKnown RBP7.55□□□□□ -1.2
PRPF40A-208ENST00000472760 CRBNQ96SW2 442 aa7.55□□□□□ -1.2
PRPF40A-208ENST00000472760 SRRTQ9BXP5 876 aaKnown RBP7.55□□□□□ -1.2
PRPF40A-208ENST00000472760 PIDD1Q9HB75 910 aa7.55□□□□□ -1.2
PRPF40A-208ENST00000472760 DISC1Q9NRI5 854 aa7.55□□□□□ -1.2
PRPF40A-208ENST00000472760 PPT2Q9UMR5 302 aa7.55□□□□□ -1.2
PRPF40A-208ENST00000472760 CORINQ9Y5Q5 1042 aa7.55□□□□□ -1.2
PRPF40A-208ENST00000472760 FANCGO15287 622 aa7.54□□□□□ -1.2
PRPF40A-208ENST00000472760 GAS2O43903 313 aaKnown RBP7.54□□□□□ -1.2
PRPF40A-208ENST00000472760 RNGTTO60942 597 aaKnown RBP7.54□□□□□ -1.2
PRPF40A-208ENST00000472760 IMPDH2P12268 514 aa7.54□□□□□ -1.2
PRPF40A-208ENST00000472760 NOS3P29474 1203 aa7.54□□□□□ -1.2
PRPF40A-208ENST00000472760 GRK4P32298 578 aa7.54□□□□□ -1.2
PRPF40A-208ENST00000472760 ASPAP45381 313 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms