RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 IDI2Q9BXS1 227 aa12.17□□□□□ -0.46
NUDCD3-205ENST00000472246 DDX4Q9NQI0 724 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-205ENST00000472246 AKAP2Q9Y2D5 859 aa12.17□□□□□ -0.46
NUDCD3-205ENST00000472246 DOCK1Q14185 1865 aa12.17□□□□□ -0.46
NUDCD3-205ENST00000472246 ADGRA2Q96PE1 1338 aa12.16□□□□□ -0.46
NUDCD3-205ENST00000472246 DDTLA6NHG4 134 aaPredicted RBP12.16□□□□□ -0.46
NUDCD3-205ENST00000472246 PHF20L1A8MW92 1017 aa12.16□□□□□ -0.46
NUDCD3-205ENST00000472246 ENTPD3O75355 529 aa12.16□□□□□ -0.46
NUDCD3-205ENST00000472246 GNAI2P04899 355 aa12.16□□□□□ -0.46
NUDCD3-205ENST00000472246 MECOMQ03112 1051 aa12.16□□□□□ -0.46
NUDCD3-205ENST00000472246 KIF22Q14807 665 aa12.16□□□□□ -0.46
NUDCD3-205ENST00000472246 ZSCAN29Q8IWY8 852 aaPredicted RBP12.16□□□□□ -0.46
NUDCD3-205ENST00000472246 HMG20BQ9P0W2 317 aa12.16□□□□□ -0.46
NUDCD3-205ENST00000472246 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.16□□□□□ -0.46
NUDCD3-205ENST00000472246 PTPRFP10586 1907 aa12.15□□□□□ -0.46
NUDCD3-205ENST00000472246 IPO8O15397 1037 aaKnown RBP12.15□□□□□ -0.46
NUDCD3-205ENST00000472246 SPTY2D1Q68D10 685 aaPredicted RBP12.15□□□□□ -0.46
NUDCD3-205ENST00000472246 GPAT2Q6NUI2 795 aa12.15□□□□□ -0.46
NUDCD3-205ENST00000472246 TBC1D9Q6ZT07 1266 aa12.15□□□□□ -0.46
NUDCD3-205ENST00000472246 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
NUDCD3-205ENST00000472246 CCDC84Q86UT8 332 aaPredicted RBP12.15□□□□□ -0.46
NUDCD3-205ENST00000472246 SCYL3Q8IZE3 742 aa12.15□□□□□ -0.46
NUDCD3-205ENST00000472246 TMEM57Q8N5G2 664 aa12.15□□□□□ -0.46
NUDCD3-205ENST00000472246 FAM163AQ96GL9 167 aaPredicted RBP12.15□□□□□ -0.46
NUDCD3-205ENST00000472246 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
NUDCD3-205ENST00000472246 ZHX2Q9Y6X8 837 aa12.15□□□□□ -0.46
NUDCD3-205ENST00000472246 PHIPQ8WWQ0 1821 aa12.15□□□□□ -0.46
NUDCD3-205ENST00000472246 FAM196BA6NMK8 535 aa12.14□□□□□ -0.47
NUDCD3-205ENST00000472246 CYP2C8P10632 490 aa12.14□□□□□ -0.47
NUDCD3-205ENST00000472246 MCAMP43121 646 aa12.14□□□□□ -0.47
NUDCD3-205ENST00000472246 PSMC4P43686 418 aa12.14□□□□□ -0.47
NUDCD3-205ENST00000472246 RHBDL3P58872 404 aa12.14□□□□□ -0.47
NUDCD3-205ENST00000472246 GORABQ5T7V8 394 aa12.14□□□□□ -0.47
NUDCD3-205ENST00000472246 NBPF11Q86T75 865 aa12.14□□□□□ -0.47
NUDCD3-205ENST00000472246 SLF2Q8IX21 1173 aa12.14□□□□□ -0.47
NUDCD3-205ENST00000472246 SPATA5Q8NB90 893 aa12.14□□□□□ -0.47
NUDCD3-205ENST00000472246 TRIM47Q96LD4 638 aa12.14□□□□□ -0.47
NUDCD3-205ENST00000472246 PICK1Q9NRD5 415 aa12.14□□□□□ -0.47
NUDCD3-205ENST00000472246 GPR75-ASB3A0A0A6YYF3 556 aa12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 A0A0G2JLL6 359 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 CXCL11O14625 94 aa12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 PTPRAP18433 802 aa12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 OSBPP22059 807 aa12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 ARID4AP29374 1257 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 MAP3K10Q02779 954 aa12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 G3BP1Q13283 466 aaKnown RBP eCLIP12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 SLC4A8Q2Y0W8 1093 aa12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 PRRT2Q7Z6L0 340 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 NSUN4Q96CB9 384 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 PARK7Q99497 189 aaKnown RBP12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 C1orf115Q9H7X2 142 aa12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 RAI14Q9P0K7 980 aa12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 AFG3L2Q9Y4W6 797 aa12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 MAST2Q6P0Q8 1798 aa12.13□□□□□ -0.47
NUDCD3-205ENST00000472246 MGAMO43451 1857 aa12.12□□□□□ -0.47
NUDCD3-205ENST00000472246 TRIM75PA6NK02 468 aa12.12□□□□□ -0.47
NUDCD3-205ENST00000472246 FMNL1O95466 1100 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-205ENST00000472246 GNRH1P01148 92 aa12.12□□□□□ -0.47
NUDCD3-205ENST00000472246 BCRP11274 1271 aa12.12□□□□□ -0.47
NUDCD3-205ENST00000472246 MTFR1Q15390 333 aa12.12□□□□□ -0.47
NUDCD3-205ENST00000472246 ZKSCAN2Q63HK3 967 aa12.12□□□□□ -0.47
NUDCD3-205ENST00000472246 GADL1Q6ZQY3 521 aa12.12□□□□□ -0.47
NUDCD3-205ENST00000472246 SRRDQ9UH36 339 aa12.12□□□□□ -0.47
NUDCD3-205ENST00000472246 MYPNQ86TC9 1320 aa12.11□□□□□ -0.47
NUDCD3-205ENST00000472246 ATAD5Q96QE3 1844 aa12.11□□□□□ -0.47
NUDCD3-205ENST00000472246 CTNND1O60716 968 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-205ENST00000472246 PRMT2P55345 433 aa12.11□□□□□ -0.47
NUDCD3-205ENST00000472246 FASTKD5Q7L8L6 764 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-205ENST00000472246 OSBPL5Q9H0X9 879 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-205ENST00000472246 SNRKQ9NRH2 765 aa12.11□□□□□ -0.47
NUDCD3-205ENST00000472246 SIPA1L1O43166 1804 aa12.11□□□□□ -0.47
NUDCD3-205ENST00000472246 MYO5AQ9Y4I1 1855 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 COL2A1P02458 1487 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 LDHCP07864 332 aa12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 GSTO1P78417 241 aa12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 HNRNPUQ00839 825 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 PRKCZQ05513 592 aa12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 POLA2Q14181 598 aa12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 TNNI3KQ59H18 835 aa12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 TTC39AQ5SRH9 613 aa12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 TEX11Q8IYF3 940 aa12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 RAET1EQ8TD07 263 aa12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 SHISA4Q96DD7 197 aa12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 DBNDD2Q9BQY9 259 aa12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 LRP2BPQ9P2M1 347 aa12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 FPGT-TNNI3KV9GXZ4 949 aa12.1□□□□□ -0.47
NUDCD3-205ENST00000472246 CDK5RAP2Q96SN8 1893 aa12.09□□□□□ -0.47
NUDCD3-205ENST00000472246 TBC1D12O60347 775 aa12.09□□□□□ -0.47
NUDCD3-205ENST00000472246 NPM3O75607 178 aaKnown RBP12.09□□□□□ -0.47
NUDCD3-205ENST00000472246 UQCRFS1P1P0C7P4 283 aa12.09□□□□□ -0.47
NUDCD3-205ENST00000472246 RLBP1P12271 317 aa12.09□□□□□ -0.47
NUDCD3-205ENST00000472246 HOXD10P28358 340 aa12.09□□□□□ -0.47
NUDCD3-205ENST00000472246 GRK4P32298 578 aa12.09□□□□□ -0.47
NUDCD3-205ENST00000472246 FCGRTP55899 365 aa12.09□□□□□ -0.47
NUDCD3-205ENST00000472246 OS9Q13438 667 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-205ENST00000472246 RRP1BQ14684 758 aaKnown RBP12.09□□□□□ -0.47
NUDCD3-205ENST00000472246 TREML2Q5T2D2 321 aa12.09□□□□□ -0.47
NUDCD3-205ENST00000472246 SSH3Q8TE77 659 aa12.09□□□□□ -0.47
NUDCD3-205ENST00000472246 SH3RF3Q8TEJ3 882 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms