RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 GSTO1P78417 241 aa27.75■■■□□ 2.03
C9orf3-213ENST00000471978 PICALMQ13492 652 aa27.75■■■□□ 2.03
C9orf3-213ENST00000471978 ARHGEF6Q15052 776 aa27.75■■■□□ 2.03
C9orf3-213ENST00000471978 SH3BP5LQ7L8J4 393 aa27.75■■■□□ 2.03
C9orf3-213ENST00000471978 DDX4Q9NQI0 724 aaKnown RBP27.75■■■□□ 2.03
C9orf3-213ENST00000471978 KCNH4Q9UQ05 1017 aa27.75■■■□□ 2.03
C9orf3-213ENST00000471978 ZBED9Q6R2W3 1325 aa27.74■■■□□ 2.03
C9orf3-213ENST00000471978 TLR2O60603 784 aa27.74■■■□□ 2.03
C9orf3-213ENST00000471978 MCAMP43121 646 aa27.74■■■□□ 2.03
C9orf3-213ENST00000471978 NSUN4Q96CB9 384 aaKnown RBP27.74■■■□□ 2.03
C9orf3-213ENST00000471978 GPR108Q9NPR9 543 aa27.74■■■□□ 2.03
C9orf3-213ENST00000471978 RAI14Q9P0K7 980 aa27.74■■■□□ 2.03
C9orf3-213ENST00000471978 DDTLA6NHG4 134 aaPredicted RBP27.73■■■□□ 2.03
C9orf3-213ENST00000471978 PHF20L1A8MW92 1017 aa27.73■■■□□ 2.03
C9orf3-213ENST00000471978 ZBTB7BO15156 539 aaPredicted RBP27.73■■■□□ 2.03
C9orf3-213ENST00000471978 SURF6O75683 361 aaKnown RBP27.73■■■□□ 2.03
C9orf3-213ENST00000471978 LDHCP07864 332 aa27.73■■■□□ 2.03
C9orf3-213ENST00000471978 RHBDL3P58872 404 aa27.73■■■□□ 2.03
C9orf3-213ENST00000471978 TNNI3KQ59H18 835 aa27.73■■■□□ 2.03
C9orf3-213ENST00000471978 FPGT-TNNI3KV9GXZ4 949 aa27.73■■■□□ 2.03
C9orf3-213ENST00000471978 DOCK2Q92608 1830 aa27.73■■■□□ 2.03
C9orf3-213ENST00000471978 ANKRD23Q86SG2 305 aa27.72■■■□□ 2.03
C9orf3-213ENST00000471978 PDE4DIPQ5VU43 2346 aa27.72■■■□□ 2.03
C9orf3-213ENST00000471978 TTC39AQ5SRH9 613 aa27.71■■■□□ 2.03
C9orf3-213ENST00000471978 SCYL3Q8IZE3 742 aa27.71■■■□□ 2.03
C9orf3-213ENST00000471978 LRP2BPQ9P2M1 347 aa27.71■■■□□ 2.03
C9orf3-213ENST00000471978 PDHXO00330 501 aa27.7■■■□□ 2.02
C9orf3-213ENST00000471978 MAP3K10Q02779 954 aa27.7■■■□□ 2.02
C9orf3-213ENST00000471978 CCDC158Q5M9N0 1113 aa27.7■■■□□ 2.02
C9orf3-213ENST00000471978 DBNDD2Q9BQY9 259 aa27.7■■■□□ 2.02
C9orf3-213ENST00000471978 PICK1Q9NRD5 415 aa27.7■■■□□ 2.02
C9orf3-213ENST00000471978 SNRKQ9NRH2 765 aa27.7■■■□□ 2.02
C9orf3-213ENST00000471978 CXCL11O14625 94 aa27.69■■■□□ 2.02
C9orf3-213ENST00000471978 MAP4K4O95819 1239 aaPredicted RBP27.69■■■□□ 2.02
C9orf3-213ENST00000471978 SLURP2P0DP57 97 aa27.69■■■□□ 2.02
C9orf3-213ENST00000471978 KIF22Q14807 665 aa27.69■■■□□ 2.02
C9orf3-213ENST00000471978 NPM3O75607 178 aaKnown RBP27.68■■■□□ 2.02
C9orf3-213ENST00000471978 LACTBP83111 547 aaPredicted RBP27.68■■■□□ 2.02
C9orf3-213ENST00000471978 MOGSQ13724 837 aa27.68■■■□□ 2.02
C9orf3-213ENST00000471978 ARMC5Q96C12 935 aa27.68■■■□□ 2.02
C9orf3-213ENST00000471978 NOP58Q9Y2X3 529 aaKnown RBP27.68■■■□□ 2.02
C9orf3-213ENST00000471978 ZHX2Q9Y6X8 837 aa27.68■■■□□ 2.02
C9orf3-213ENST00000471978 PTPRAP18433 802 aa27.67■■■□□ 2.02
C9orf3-213ENST00000471978 ARHGAP39Q9C0H5 1083 aa27.67■■■□□ 2.02
C9orf3-213ENST00000471978 CTNND1O60716 968 aaKnown RBP27.66■■■□□ 2.02
C9orf3-213ENST00000471978 C17orf99Q6UX52 265 aa27.66■■■□□ 2.02
C9orf3-213ENST00000471978 CPA4Q9UI42 421 aa27.66■■■□□ 2.02
C9orf3-213ENST00000471978 PTCH2Q9Y6C5 1203 aa27.66■■■□□ 2.02
C9orf3-213ENST00000471978 PANK1Q8TE04 598 aa27.65■■■□□ 2.02
C9orf3-213ENST00000471978 NOL10Q9BSC4 688 aaKnown RBP27.65■■■□□ 2.02
C9orf3-213ENST00000471978 POTEFA5A3E0 1075 aa27.64■■■□□ 2.02
C9orf3-213ENST00000471978 TBC1D12O60347 775 aa27.64■■■□□ 2.02
C9orf3-213ENST00000471978 NAA16Q6N069 864 aaPredicted RBP27.64■■■□□ 2.02
C9orf3-213ENST00000471978 GPAT2Q6NUI2 795 aa27.64■■■□□ 2.02
C9orf3-213ENST00000471978 CEP85Q6P2H3 762 aa27.64■■■□□ 2.02
C9orf3-213ENST00000471978 TEX11Q8IYF3 940 aa27.64■■■□□ 2.02
C9orf3-213ENST00000471978 AFG3L2Q9Y4W6 797 aa27.64■■■□□ 2.02
C9orf3-213ENST00000471978 BRCA2P51587 3418 aa27.63■■■□□ 2.01
C9orf3-213ENST00000471978 A0A0G2JLL6 359 aaPredicted RBP27.63■■■□□ 2.01
C9orf3-213ENST00000471978 CYP2E1P05181 493 aaPredicted RBP27.63■■■□□ 2.01
C9orf3-213ENST00000471978 SLC9C1Q4G0N8 1177 aa27.63■■■□□ 2.01
C9orf3-213ENST00000471978 FASTKD5Q7L8L6 764 aaKnown RBP27.63■■■□□ 2.01
C9orf3-213ENST00000471978 PRRT2Q7Z6L0 340 aaPredicted RBP27.63■■■□□ 2.01
C9orf3-213ENST00000471978 ZNF512BQ96KM6 892 aaPredicted RBP27.63■■■□□ 2.01
C9orf3-213ENST00000471978 OSBPL5Q9H0X9 879 aaPredicted RBP27.63■■■□□ 2.01
C9orf3-213ENST00000471978 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.63■■■□□ 2.014e-8■■■■■ 37.5
C9orf3-213ENST00000471978 DBNLQ9UJU6 430 aaKnown RBP27.63■■■□□ 2.01
C9orf3-213ENST00000471978 ECM2O94769 699 aaPredicted RBP27.62■■■□□ 2.01
C9orf3-213ENST00000471978 GNRH1P01148 92 aa27.62■■■□□ 2.01
C9orf3-213ENST00000471978 NBPF11Q86T75 865 aa27.62■■■□□ 2.01
C9orf3-213ENST00000471978 SH3RF3Q8TEJ3 882 aaPredicted RBP27.62■■■□□ 2.01
C9orf3-213ENST00000471978 PARK7Q99497 189 aaKnown RBP27.62■■■□□ 2.01
C9orf3-213ENST00000471978 CCDC8Q9H0W5 538 aaPredicted RBP27.62■■■□□ 2.01
C9orf3-213ENST00000471978 COL2A1P02458 1487 aaPredicted RBP27.62■■■□□ 2.01
C9orf3-213ENST00000471978 ADGRA2Q96PE1 1338 aa27.62■■■□□ 2.01
C9orf3-213ENST00000471978 MKI67P46013 3256 aaKnown RBP27.61■■■□□ 2.01
C9orf3-213ENST00000471978 FAM196BA6NMK8 535 aa27.61■■■□□ 2.01
C9orf3-213ENST00000471978 BAG3O95817 575 aa27.61■■■□□ 2.01
C9orf3-213ENST00000471978 EAF2Q96CJ1 260 aaPredicted RBP27.61■■■□□ 2.01
C9orf3-213ENST00000471978 ZNF333Q96JL9 665 aa27.61■■■□□ 2.01
C9orf3-213ENST00000471978 AATFQ9NY61 560 aaKnown RBP eCLIP27.61■■■□□ 2.01
C9orf3-213ENST00000471978 TLR7Q9NYK1 1049 aaKnown RBP27.61■■■□□ 2.01
C9orf3-213ENST00000471978 ZSWIM8A7E2V4 1837 aa27.61■■■□□ 2.01
C9orf3-213ENST00000471978 DOCK1Q14185 1865 aa27.6■■■□□ 2.01
C9orf3-213ENST00000471978 CYP2C8P10632 490 aa27.6■■■□□ 2.01
C9orf3-213ENST00000471978 ZAP70P43403 619 aa27.6■■■□□ 2.01
C9orf3-213ENST00000471978 GADL1Q6ZQY3 521 aa27.6■■■□□ 2.01
C9orf3-213ENST00000471978 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.6■■■□□ 2.01
C9orf3-213ENST00000471978 TRIM75PA6NK02 468 aa27.59■■■□□ 2.01
C9orf3-213ENST00000471978 MS4A1P11836 297 aa27.59■■■□□ 2.01
C9orf3-213ENST00000471978 PLCG2P16885 1265 aa27.59■■■□□ 2.01
C9orf3-213ENST00000471978 PSMC4P43686 418 aa27.59■■■□□ 2.01
C9orf3-213ENST00000471978 TMEM106CQ9BVX2 250 aa27.59■■■□□ 2.01
C9orf3-213ENST00000471978 MAST2Q6P0Q8 1798 aa27.58■■■□□ 2.01
C9orf3-213ENST00000471978 CTGFP29279 349 aa27.58■■■□□ 2.01
C9orf3-213ENST00000471978 PRMT2P55345 433 aa27.58■■■□□ 2.01
C9orf3-213ENST00000471978 PPP4CP60510 307 aa27.58■■■□□ 2.01
C9orf3-213ENST00000471978 ADGRA1Q86SQ6 560 aa27.58■■■□□ 2.01
C9orf3-213ENST00000471978 CCDC84Q86UT8 332 aaPredicted RBP27.58■■■□□ 2.01
C9orf3-213ENST00000471978 TRIM47Q96LD4 638 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms