RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 Q6ZUG5 572 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 GLT8D2Q9H1C3 349 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 MROH5Q6ZUA9 1318 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 GOLGA6L9A6NEM1 432 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 KIF4BQ2VIQ3 1234 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 ZNF594Q96JF6 807 aaPredicted RBP9.65□□□□□ -0.86
CD47-204ENST00000471694 PIDD1Q9HB75 910 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 IQCA1LA6NCM1 817 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 RXRAP19793 462 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 HAUS3Q68CZ6 603 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 ELMOD1Q8N336 334 aa9.65□□□□□ -0.86
CD47-204ENST00000471694 RYBPQ8N488 228 aaPredicted RBP9.65□□□□□ -0.86
CD47-204ENST00000471694 USP14P54578 494 aa9.65□□□□□ -0.87
CD47-204ENST00000471694 SLITRK6Q9H5Y7 841 aa9.65□□□□□ -0.87
CD47-204ENST00000471694 NPHP4O75161 1426 aaPredicted RBP9.64□□□□□ -0.87
CD47-204ENST00000471694 C21orf2O43822 256 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 SEPT14Q6ZU15 432 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 MCF2L2Q86YR7 1114 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 ERVV-2B6SEH9 535 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 PRPHP41219 470 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 PPP2R5CQ13362 524 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 PPP2R5DQ14738 602 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 DHX58Q96C10 678 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 SUGCTQ9HAC7 445 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 ADCY7P51828 1080 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 FAM102BQ5T8I3 360 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 LOC102724428A0A0B4J2F2 783 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 ZSCAN12O43309 604 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 SIK1P57059 783 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 PPP1R21Q6ZMI0 780 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 PARP2Q9UGN5 583 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 GOLGA6CA6NDK9 693 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 GOLGA6BA6NDN3 693 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 PSMA7O14818 248 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 CTAGE5O15320 804 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 GOLGA6DP0CG33 693 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 RPL13P26373 211 aaKnown RBP9.64□□□□□ -0.87
CD47-204ENST00000471694 KCNQ4P56696 695 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 GOLGA6AQ9NYA3 693 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 TFIP11Q9UBB9 837 aaKnown RBP9.64□□□□□ -0.87
CD47-204ENST00000471694 TRIM75PA6NK02 468 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 MIER3Q7Z3K6 550 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 METTL23Q86XA0 190 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 SMC1BQ8NDV3 1235 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 CRACR2AQ9BSW2 395 aa9.64□□□□□ -0.87
CD47-204ENST00000471694 DPYSL4O14531 572 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 N4BP3O15049 544 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 SND1Q7KZF4 910 aaKnown RBP eCLIP9.63□□□□□ -0.87
CD47-204ENST00000471694 SV2BQ7L1I2 683 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 MMS19Q96T76 1030 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 CCPG1Q9ULG6 757 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 SYKP43405 635 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 CRKLP46109 303 aaKnown RBP9.63□□□□□ -0.87
CD47-204ENST00000471694 NMIQ13287 307 aaPredicted RBP9.63□□□□□ -0.87
CD47-204ENST00000471694 RAPGEF1Q13905 1077 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 XAGE2Q96GT9 111 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 CLSTN2Q9H4D0 955 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 FAM204AQ9H8W3 233 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 MRPL11Q9Y3B7 192 aaKnown RBP9.63□□□□□ -0.87
CD47-204ENST00000471694 SFPQP23246 707 aaKnown RBP eCLIP9.63□□□□□ -0.87
CD47-204ENST00000471694 ITKQ08881 620 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 LPIN2Q92539 896 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 PAIP2Q9BPZ3 127 aaKnown RBP9.63□□□□□ -0.87
CD47-204ENST00000471694 MTIF3Q9H2K0 278 aaKnown RBP9.63□□□□□ -0.87
CD47-204ENST00000471694 STIM2Q9P246 746 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 A0A1B0GUL7 405 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 CALUO43852 315 aaPredicted RBP9.63□□□□□ -0.87
CD47-204ENST00000471694 AKR1B10O60218 316 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 METTL22Q9BUU2 404 aaPredicted RBP9.63□□□□□ -0.87
CD47-204ENST00000471694 RASAL2Q9UJF2 1139 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 NUB1Q9Y5A7 615 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 UBXN2AP68543 259 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 PLCB4Q15147 1175 aa9.63□□□□□ -0.87
CD47-204ENST00000471694 THOC2Q8NI27 1593 aaKnown RBP9.63□□□□□ -0.87
CD47-204ENST00000471694 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.62□□□□□ -0.87
CD47-204ENST00000471694 ESYT2A0FGR8 921 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 CAPN9O14815 690 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 MFSD14CQ5VZR4 134 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 GABPB2Q8TAK5 448 aaPredicted RBP9.62□□□□□ -0.87
CD47-204ENST00000471694 PLEKHH1Q9ULM0 1364 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 ATP2A1O14983 1001 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 MAP7D1Q3KQU3 841 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 SLC17A8Q8NDX2 589 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 BBXQ8WY36 941 aaPredicted RBP9.62□□□□□ -0.87
CD47-204ENST00000471694 CSRNP1Q96S65 589 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 ATP10BO94823 1461 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 GPATCH8Q9UKJ3 1502 aaKnown RBP9.62□□□□□ -0.87
CD47-204ENST00000471694 FRMPD2Q68DX3 1309 aaPredicted RBP9.62□□□□□ -0.87
CD47-204ENST00000471694 MMP10P09238 476 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 ABCB5Q2M3G0 1257 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 CCDC89Q8N998 374 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 SPATA5Q8NB90 893 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 JAKMIP2Q96AA8 810 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 TBC1D31Q96DN5 1066 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 ATP6V0A2Q9Y487 856 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 POLR2MP0CAP2 368 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 MYCT1Q8N699 235 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 SELENOOQ9BVL4 669 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 JADE2Q9NQC1 790 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 TRAPPC8Q9Y2L5 1435 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms