RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 CREB3L3Q68CJ9 461 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 RASEFQ8IZ41 740 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 VEZTQ9HBM0 779 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 ADARB2Q9NS39 739 aaKnown RBP22.9■■□□□ 1.26
PSPC1-203ENST00000471658 MCM9Q9NXL9 1143 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 USP17L12C9JPN9 530 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 USP17L21D6R901 530 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 EPB41L2O43491 1005 aaKnown RBP22.9■■□□□ 1.26
PSPC1-203ENST00000471658 CYP21A2P08686 494 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 GIMAP6Q6P9H5 292 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 CTR9Q6PD62 1173 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 IDI2Q9BXS1 227 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 HACL1Q9UJ83 578 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 CDK5RAP2Q96SN8 1893 aa22.89■■□□□ 1.26
PSPC1-203ENST00000471658 TBC1D32Q96NH3 1257 aa22.89■■□□□ 1.25
PSPC1-203ENST00000471658 CTNNA3Q9UI47 895 aa22.89■■□□□ 1.25
PSPC1-203ENST00000471658 MINDY4BA8MYZ0 360 aa22.88■■□□□ 1.25
PSPC1-203ENST00000471658 MYO1BO43795 1136 aa22.88■■□□□ 1.25
PSPC1-203ENST00000471658 STK11IPQ8N1F8 1099 aa22.88■■□□□ 1.25
PSPC1-203ENST00000471658 BAZ2AQ9UIF9 1905 aaKnown RBP22.88■■□□□ 1.25
PSPC1-203ENST00000471658 ECM29Q5VYK3 1845 aa22.87■■□□□ 1.25
PSPC1-203ENST00000471658 EPHX2P34913 555 aa22.87■■□□□ 1.25
PSPC1-203ENST00000471658 DDRGK1Q96HY6 314 aa22.87■■□□□ 1.25
PSPC1-203ENST00000471658 NBPF3Q9H094 633 aa22.87■■□□□ 1.25
PSPC1-203ENST00000471658 OSBPL5Q9H0X9 879 aaPredicted RBP22.87■■□□□ 1.25
PSPC1-203ENST00000471658 TMOD2Q9NZR1 351 aa22.87■■□□□ 1.25
PSPC1-203ENST00000471658 SNX14Q9Y5W7 946 aa22.87■■□□□ 1.25
PSPC1-203ENST00000471658 RBM25P49756 843 aaKnown RBP22.86■■□□□ 1.25
PSPC1-203ENST00000471658 CTDSPL2Q05D32 466 aa22.86■■□□□ 1.25
PSPC1-203ENST00000471658 KCNB2Q92953 911 aa22.86■■□□□ 1.25
PSPC1-203ENST00000471658 INCENPQ9NQS7 918 aa22.86■■□□□ 1.25
PSPC1-203ENST00000471658 TACC3Q9Y6A5 838 aa22.86■■□□□ 1.25
PSPC1-203ENST00000471658 ZMYM6O95789 1325 aa22.86■■□□□ 1.25
PSPC1-203ENST00000471658 ZNF213O14771 459 aa22.86■■□□□ 1.25
PSPC1-203ENST00000471658 MCCP23508 829 aa22.86■■□□□ 1.25
PSPC1-203ENST00000471658 PLCD1P51178 756 aa22.86■■□□□ 1.25
PSPC1-203ENST00000471658 ANGEL2Q5VTE6 544 aaKnown RBP22.86■■□□□ 1.25
PSPC1-203ENST00000471658 SH3BP5LQ7L8J4 393 aa22.86■■□□□ 1.25
PSPC1-203ENST00000471658 ZNF526Q8TF50 670 aaPredicted RBP22.86■■□□□ 1.25
PSPC1-203ENST00000471658 TAF1DQ9H5J8 278 aaPredicted RBP22.86■■□□□ 1.25
PSPC1-203ENST00000471658 RRAGCQ9HB90 399 aa22.86■■□□□ 1.25
PSPC1-203ENST00000471658 CNTNAP1P78357 1384 aa22.85■■□□□ 1.25
PSPC1-203ENST00000471658 DDTLA6NHG4 134 aaPredicted RBP22.85■■□□□ 1.25
PSPC1-203ENST00000471658 POLR3DP05423 398 aaPredicted RBP22.85■■□□□ 1.25
PSPC1-203ENST00000471658 PPARAQ07869 468 aa22.85■■□□□ 1.25
PSPC1-203ENST00000471658 IMMTQ16891 758 aaKnown RBP22.85■■□□□ 1.25
PSPC1-203ENST00000471658 SBK1Q52WX2 424 aa22.85■■□□□ 1.25
PSPC1-203ENST00000471658 FOCADQ5VW36 1801 aa22.84■■□□□ 1.25
PSPC1-203ENST00000471658 SLURP2P0DP57 97 aa22.84■■□□□ 1.25
PSPC1-203ENST00000471658 C12orf60Q5U649 245 aa22.84■■□□□ 1.25
PSPC1-203ENST00000471658 STOX1Q6ZVD7 989 aa22.84■■□□□ 1.25
PSPC1-203ENST00000471658 TBC1D10CQ8IV04 446 aa22.84■■□□□ 1.25
PSPC1-203ENST00000471658 ARPP21Q9UBL0 812 aaPredicted RBP22.84■■□□□ 1.25
PSPC1-203ENST00000471658 WDR90Q96KV7 1748 aa22.84■■□□□ 1.25
PSPC1-203ENST00000471658 NAV1Q8NEY1 1877 aa22.84■■□□□ 1.25
PSPC1-203ENST00000471658 ENTPD3O75355 529 aa22.83■■□□□ 1.25
PSPC1-203ENST00000471658 NPM3O75607 178 aaKnown RBP22.83■■□□□ 1.25
PSPC1-203ENST00000471658 COL9A3Q14050 684 aaPredicted RBP22.83■■□□□ 1.25
PSPC1-203ENST00000471658 CDAN1Q8IWY9 1227 aa22.83■■□□□ 1.25
PSPC1-203ENST00000471658 KIF2CQ99661 725 aa22.83■■□□□ 1.25
PSPC1-203ENST00000471658 TSHZ2Q9NRE2 1034 aa22.83■■□□□ 1.25
PSPC1-203ENST00000471658 GGA3Q9NZ52 723 aa22.83■■□□□ 1.25
PSPC1-203ENST00000471658 IQCA1LA6NCM1 817 aa22.82■■□□□ 1.24
PSPC1-203ENST00000471658 ADCK5Q3MIX3 580 aa22.82■■□□□ 1.24
PSPC1-203ENST00000471658 RNF20Q5VTR2 975 aa22.82■■□□□ 1.24
PSPC1-203ENST00000471658 FKBP1CQ5VVH2 108 aa22.82■■□□□ 1.24
PSPC1-203ENST00000471658 USP50Q70EL3 339 aaPredicted RBP22.82■■□□□ 1.24
PSPC1-203ENST00000471658 FAM151AQ8WW52 585 aa22.82■■□□□ 1.24
PSPC1-203ENST00000471658 DYNLL2Q96FJ2 89 aa22.82■■□□□ 1.24
PSPC1-203ENST00000471658 TMEM39BQ9GZU3 492 aa22.82■■□□□ 1.24
PSPC1-203ENST00000471658 RASA3Q14644 834 aa22.82■■□□□ 1.24
PSPC1-203ENST00000471658 EAPPQ56P03 285 aaPredicted RBP22.82■■□□□ 1.24
PSPC1-203ENST00000471658 ZSCAN29Q8IWY8 852 aaPredicted RBP22.82■■□□□ 1.24
PSPC1-203ENST00000471658 NKX2-3Q8TAU0 364 aa22.82■■□□□ 1.24
PSPC1-203ENST00000471658 NMRK2Q9NPI5 230 aa22.82■■□□□ 1.24
PSPC1-203ENST00000471658 ZKSCAN1P17029 563 aaPredicted RBP22.81■■□□□ 1.24
PSPC1-203ENST00000471658 DDX60LQ5H9U9 1706 aaKnown RBP22.81■■□□□ 1.24
PSPC1-203ENST00000471658 ANAPC4Q9UJX5 808 aa22.81■■□□□ 1.24
PSPC1-203ENST00000471658 MYH1P12882 1939 aa22.8■■□□□ 1.24
PSPC1-203ENST00000471658 E7EWF7 191 aa22.8■■□□□ 1.24
PSPC1-203ENST00000471658 POTEIP0CG38 1075 aa22.8■■□□□ 1.24
PSPC1-203ENST00000471658 POTEJP0CG39 1038 aa22.8■■□□□ 1.24
PSPC1-203ENST00000471658 TSGA10IPQ3SY00 556 aa22.8■■□□□ 1.24
PSPC1-203ENST00000471658 FAM83AQ86UY5 434 aa22.8■■□□□ 1.24
PSPC1-203ENST00000471658 SCN4AP35499 1836 aa22.8■■□□□ 1.24
PSPC1-203ENST00000471658 DLK2Q6UY11 383 aa22.79■■□□□ 1.24
PSPC1-203ENST00000471658 DEFB129Q9H1M3 183 aa22.79■■□□□ 1.24
PSPC1-203ENST00000471658 PGAP2Q9UHJ9 254 aa22.79■■□□□ 1.24
PSPC1-203ENST00000471658 CPA1P15085 419 aa22.79■■□□□ 1.24
PSPC1-203ENST00000471658 VEGFAP15692 232 aaPredicted RBP22.79■■□□□ 1.24
PSPC1-203ENST00000471658 ANAPC15P60006 121 aa22.79■■□□□ 1.24
PSPC1-203ENST00000471658 PRAMEF18Q5VWM3 479 aa22.79■■□□□ 1.24
PSPC1-203ENST00000471658 TTC6Q86TZ1 520 aa22.79■■□□□ 1.24
PSPC1-203ENST00000471658 AMOTL1Q8IY63 956 aa22.79■■□□□ 1.24
PSPC1-203ENST00000471658 SLC44A5Q8NCS7 719 aa22.79■■□□□ 1.24
PSPC1-203ENST00000471658 PRDM1O75626 825 aa22.78■■□□□ 1.24
PSPC1-203ENST00000471658 TNNI2P48788 182 aa22.78■■□□□ 1.24
PSPC1-203ENST00000471658 AKNAD1Q5T1N1 836 aa22.78■■□□□ 1.24
PSPC1-203ENST00000471658 JAKMIP1Q96N16 626 aaKnown RBP22.78■■□□□ 1.24
PSPC1-203ENST00000471658 TEPSINQ96N21 525 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms