RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 TTLL4Q14679 1199 aa5.94□□□□□ -1.46
COPS3-206ENST00000471414 MAP1SQ66K74 1059 aaPredicted RBP5.94□□□□□ -1.46
COPS3-206ENST00000471414 KCNB2Q92953 911 aa5.94□□□□□ -1.46
COPS3-206ENST00000471414 COL17A1Q9UMD9 1497 aaPredicted RBP5.94□□□□□ -1.46
COPS3-206ENST00000471414 ANKRD33BA6NCL7 494 aa5.93□□□□□ -1.46
COPS3-206ENST00000471414 FBXO24O75426 580 aa5.93□□□□□ -1.46
COPS3-206ENST00000471414 WNT11O96014 354 aa5.93□□□□□ -1.46
COPS3-206ENST00000471414 CELA3AP09093 270 aa5.93□□□□□ -1.46
COPS3-206ENST00000471414 MCTP1Q6DN14 999 aa5.93□□□□□ -1.46
COPS3-206ENST00000471414 SV2BQ7L1I2 683 aa5.93□□□□□ -1.46
COPS3-206ENST00000471414 WFDC3Q8IUB2 231 aa5.93□□□□□ -1.46
COPS3-206ENST00000471414 NPAS4Q8IUM7 802 aa5.93□□□□□ -1.46
COPS3-206ENST00000471414 SMYD4Q8IYR2 804 aaPredicted RBP5.93□□□□□ -1.46
COPS3-206ENST00000471414 RNF214Q8ND24 703 aa5.93□□□□□ -1.46
COPS3-206ENST00000471414 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
COPS3-206ENST00000471414 RNF19AQ9NV58 838 aa5.93□□□□□ -1.46
COPS3-206ENST00000471414 CCDC39Q9UFE4 941 aa5.93□□□□□ -1.46
COPS3-206ENST00000471414 ZC3H7BQ9UGR2 993 aaKnown RBP5.93□□□□□ -1.46
COPS3-206ENST00000471414 CYP26A1O43174 497 aa5.92□□□□□ -1.46
COPS3-206ENST00000471414 PDIA4P13667 645 aaKnown RBP5.92□□□□□ -1.46
COPS3-206ENST00000471414 DUSP27Q5VZP5 1158 aa5.92□□□□□ -1.46
COPS3-206ENST00000471414 ISL2Q96A47 359 aa5.92□□□□□ -1.46
COPS3-206ENST00000471414 BSDC1Q9NW68 430 aaPredicted RBP5.92□□□□□ -1.46
COPS3-206ENST00000471414 CYP8B1Q9UNU6 501 aa5.92□□□□□ -1.46
COPS3-206ENST00000471414 SAMM50Q9Y512 469 aa5.92□□□□□ -1.46
COPS3-206ENST00000471414 AK5Q9Y6K8 562 aa5.92□□□□□ -1.46
COPS3-206ENST00000471414 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.91□□□□□ -1.46
COPS3-206ENST00000471414 HCLS1P14317 486 aaPredicted RBP5.91□□□□□ -1.46
COPS3-206ENST00000471414 CDK5R2Q13319 367 aa5.91□□□□□ -1.46
COPS3-206ENST00000471414 PCNX4Q63HM2 1172 aa5.91□□□□□ -1.46
COPS3-206ENST00000471414 LLGL2Q6P1M3 1020 aa5.91□□□□□ -1.46
COPS3-206ENST00000471414 FBXO33Q7Z6M2 555 aa5.91□□□□□ -1.46
COPS3-206ENST00000471414 VSIG10LQ86VR7 867 aa5.91□□□□□ -1.46
COPS3-206ENST00000471414 GAL3ST3Q96A11 431 aa5.91□□□□□ -1.46
COPS3-206ENST00000471414 PIDD1Q9HB75 910 aa5.91□□□□□ -1.46
COPS3-206ENST00000471414 PCOLCE2Q9UKZ9 415 aa5.91□□□□□ -1.46
COPS3-206ENST00000471414 U3KQE9 123 aa5.91□□□□□ -1.46
COPS3-206ENST00000471414 FAM87AP0C7U9 286 aa5.9□□□□□ -1.46
COPS3-206ENST00000471414 EIF4BP23588 611 aaKnown RBP5.9□□□□□ -1.46
COPS3-206ENST00000471414 FGD1P98174 961 aa5.9□□□□□ -1.46
COPS3-206ENST00000471414 LRRC14Q15048 493 aa5.9□□□□□ -1.46
COPS3-206ENST00000471414 CBLL1Q75N03 491 aa5.9□□□□□ -1.46
COPS3-206ENST00000471414 FAM214BQ7L5A3 538 aa5.9□□□□□ -1.46
COPS3-206ENST00000471414 DUSP9Q99956 384 aaKnown RBP5.9□□□□□ -1.46
COPS3-206ENST00000471414 DUSP23Q9BVJ7 150 aa5.9□□□□□ -1.46
COPS3-206ENST00000471414 LGR6Q9HBX8 967 aa5.9□□□□□ -1.46
COPS3-206ENST00000471414 ADGRE2Q9UHX3 823 aa5.9□□□□□ -1.46
COPS3-206ENST00000471414 LEFTY1O75610 366 aa5.89□□□□□ -1.47
COPS3-206ENST00000471414 RPS26P62854 115 aaKnown RBP5.89□□□□□ -1.47
COPS3-206ENST00000471414 PTPN11Q06124 597 aaPredicted RBP5.89□□□□□ -1.47
COPS3-206ENST00000471414 EAPPQ56P03 285 aaPredicted RBP5.89□□□□□ -1.47
COPS3-206ENST00000471414 ZBTB37Q5TC79 503 aa5.89□□□□□ -1.47
COPS3-206ENST00000471414 UBE3DQ7Z6J8 389 aa5.89□□□□□ -1.47
COPS3-206ENST00000471414 AEBP1Q8IUX7 1158 aa5.89□□□□□ -1.47
COPS3-206ENST00000471414 MKNK2Q9HBH9 465 aa5.89□□□□□ -1.47
COPS3-206ENST00000471414 CBX8Q9HC52 389 aa5.89□□□□□ -1.47
COPS3-206ENST00000471414 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
COPS3-206ENST00000471414 FANCGO15287 622 aa5.88□□□□□ -1.47
COPS3-206ENST00000471414 DAB2P98082 770 aa5.88□□□□□ -1.47
COPS3-206ENST00000471414 CYP27C1Q4G0S4 372 aa5.88□□□□□ -1.47
COPS3-206ENST00000471414 PPM1JQ5JR12 505 aa5.88□□□□□ -1.47
COPS3-206ENST00000471414 CYFIP1Q7L576 1253 aa5.88□□□□□ -1.47
COPS3-206ENST00000471414 ABI1Q8IZP0 508 aa5.88□□□□□ -1.47
COPS3-206ENST00000471414 FBXL18Q96ME1 805 aa5.88□□□□□ -1.47
COPS3-206ENST00000471414 KRTAP4-12Q9BQ66 201 aa5.88□□□□□ -1.47
COPS3-206ENST00000471414 LRRC4CQ9HCJ2 640 aa5.88□□□□□ -1.47
COPS3-206ENST00000471414 PAK6Q9NQU5 681 aaPredicted RBP5.88□□□□□ -1.47
COPS3-206ENST00000471414 DCDC2CA8MYV0 355 aa5.87□□□□□ -1.47
COPS3-206ENST00000471414 RNGTTO60942 597 aaKnown RBP5.87□□□□□ -1.47
COPS3-206ENST00000471414 LRFN4Q6PJG9 635 aa5.87□□□□□ -1.47
COPS3-206ENST00000471414 BCL7CQ8WUZ0 217 aaPredicted RBP5.87□□□□□ -1.47
COPS3-206ENST00000471414 ACSBG1Q96GR2 724 aa5.87□□□□□ -1.47
COPS3-206ENST00000471414 PARP2Q9UGN5 583 aa5.87□□□□□ -1.47
COPS3-206ENST00000471414 ANGEL1Q9UNK9 670 aaKnown RBP5.87□□□□□ -1.47
COPS3-206ENST00000471414 TTF2Q9UNY4 1162 aaKnown RBP5.87□□□□□ -1.47
COPS3-206ENST00000471414 CTSHP09668 335 aa5.86□□□□□ -1.47
COPS3-206ENST00000471414 CAP2P40123 477 aa5.86□□□□□ -1.47
COPS3-206ENST00000471414 ST13P50502 369 aaKnown RBP5.86□□□□□ -1.47
COPS3-206ENST00000471414 IRAK1P51617 712 aa5.86□□□□□ -1.47
COPS3-206ENST00000471414 OXCT1P55809 520 aa5.86□□□□□ -1.47
COPS3-206ENST00000471414 INPP5AQ14642 412 aa5.86□□□□□ -1.47
COPS3-206ENST00000471414 TTBK2Q6IQ55 1244 aa5.86□□□□□ -1.47
COPS3-206ENST00000471414 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.86□□□□□ -1.47
COPS3-206ENST00000471414 AGMOQ6ZNB7 445 aa5.86□□□□□ -1.47
COPS3-206ENST00000471414 TMC4Q7Z404 712 aa5.86□□□□□ -1.47
COPS3-206ENST00000471414 C12orf40Q86WS4 652 aa5.86□□□□□ -1.47
COPS3-206ENST00000471414 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.86□□□□□ -1.47
COPS3-206ENST00000471414 HEXIM2Q96MH2 286 aaKnown RBP5.86□□□□□ -1.47
COPS3-206ENST00000471414 PCDHA4Q9UN74 947 aa5.86□□□□□ -1.47
COPS3-206ENST00000471414 TAL1P17542 331 aaPredicted RBP5.85□□□□□ -1.47
COPS3-206ENST00000471414 MEI1Q5TIA1 1274 aa5.85□□□□□ -1.47
COPS3-206ENST00000471414 PLD6Q8N2A8 252 aaKnown RBP5.85□□□□□ -1.47
COPS3-206ENST00000471414 FAM181AQ8N9Y4 354 aa5.85□□□□□ -1.47
COPS3-206ENST00000471414 MISP3Q96FF7 219 aa5.85□□□□□ -1.47
COPS3-206ENST00000471414 FMNL2Q96PY5 1086 aa5.85□□□□□ -1.47
COPS3-206ENST00000471414 TNKS2Q9H2K2 1166 aa5.85□□□□□ -1.47
COPS3-206ENST00000471414 PLAGL2Q9UPG8 496 aa5.85□□□□□ -1.47
COPS3-206ENST00000471414 CSADQ9Y600 493 aa5.85□□□□□ -1.47
COPS3-206ENST00000471414 SNCAIPQ9Y6H5 919 aa5.85□□□□□ -1.47
COPS3-206ENST00000471414 IGF2BP3O00425 579 aaKnown RBP eCLIP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms