RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PGAP2Q9UHJ9 254 aa20.73■□□□□ 0.91
HSPG2-208ENST00000471322 CLRN2A0PK11 232 aa20.72■□□□□ 0.91
HSPG2-208ENST00000471322 HSPA6P17066 643 aa20.72■□□□□ 0.91
HSPG2-208ENST00000471322 RPS6KB1P23443 525 aa20.72■□□□□ 0.91
HSPG2-208ENST00000471322 CRKP46108 304 aa20.72■□□□□ 0.91
HSPG2-208ENST00000471322 DIXDC1Q155Q3 683 aa20.72■□□□□ 0.91
HSPG2-208ENST00000471322 PUS7LQ9H0K6 701 aaKnown RBP20.72■□□□□ 0.91
HSPG2-208ENST00000471322 AKAP11Q9UKA4 1901 aa20.72■□□□□ 0.91
HSPG2-208ENST00000471322 PDS5AQ29RF7 1337 aaKnown RBP20.72■□□□□ 0.91
HSPG2-208ENST00000471322 ZNF532Q9HCE3 1301 aa20.72■□□□□ 0.91
HSPG2-208ENST00000471322 POLR2AP24928 1970 aaKnown RBP20.72■□□□□ 0.91
HSPG2-208ENST00000471322 GPAA1O43292 621 aa20.71■□□□□ 0.91
HSPG2-208ENST00000471322 LDHBP07195 334 aaKnown RBP20.71■□□□□ 0.91
HSPG2-208ENST00000471322 ZNF408Q9H9D4 720 aa20.71■□□□□ 0.91
HSPG2-208ENST00000471322 TCRBV5S4A2TA0A5A2 114 aa20.71■□□□□ 0.91
HSPG2-208ENST00000471322 SPDYE2BA6NHP3 402 aa20.71■□□□□ 0.91
HSPG2-208ENST00000471322 SPDYE6P0CI01 402 aa20.71■□□□□ 0.91
HSPG2-208ENST00000471322 CDC37L1Q7L3B6 337 aa20.71■□□□□ 0.91
HSPG2-208ENST00000471322 SERPINA10Q9UK55 444 aa20.71■□□□□ 0.91
HSPG2-208ENST00000471322 PASKQ96RG2 1323 aa20.7■□□□□ 0.9
HSPG2-208ENST00000471322 IMMTQ16891 758 aaKnown RBP20.7■□□□□ 0.9
HSPG2-208ENST00000471322 PRAMEF18Q5VWM3 479 aa20.7■□□□□ 0.9
HSPG2-208ENST00000471322 NOL8Q76FK4 1167 aaKnown RBP20.7■□□□□ 0.9
HSPG2-208ENST00000471322 SULF1Q8IWU6 871 aa20.7■□□□□ 0.9
HSPG2-208ENST00000471322 ZBED3Q96IU2 234 aaPredicted RBP20.7■□□□□ 0.9
HSPG2-208ENST00000471322 LRP2BPQ9P2M1 347 aa20.7■□□□□ 0.9
HSPG2-208ENST00000471322 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.7■□□□□ 0.9
HSPG2-208ENST00000471322 IGSF3O75054 1194 aa20.69■□□□□ 0.9
HSPG2-208ENST00000471322 CPA1P15085 419 aa20.69■□□□□ 0.9
HSPG2-208ENST00000471322 APLP1P51693 650 aa20.69■□□□□ 0.9
HSPG2-208ENST00000471322 TMED8Q6PL24 325 aaPredicted RBP20.69■□□□□ 0.9
HSPG2-208ENST00000471322 ZGPATQ8N5A5 531 aaKnown RBP20.69■□□□□ 0.9
HSPG2-208ENST00000471322 TEKT1Q969V4 418 aa20.69■□□□□ 0.9
HSPG2-208ENST00000471322 GBP4Q96PP9 640 aa20.69■□□□□ 0.9
HSPG2-208ENST00000471322 TDRD3Q9H7E2 651 aaKnown RBP20.69■□□□□ 0.9
HSPG2-208ENST00000471322 SALL1Q9NSC2 1324 aa20.69■□□□□ 0.9
HSPG2-208ENST00000471322 MAGEB6Q8N7X4 407 aa20.68■□□□□ 0.9
HSPG2-208ENST00000471322 AIDAQ96BJ3 306 aa20.68■□□□□ 0.9
HSPG2-208ENST00000471322 VEZTQ9HBM0 779 aa20.68■□□□□ 0.9
HSPG2-208ENST00000471322 SUGT1Q9Y2Z0 365 aa20.68■□□□□ 0.9
HSPG2-208ENST00000471322 MMP14P50281 582 aa20.67■□□□□ 0.9
HSPG2-208ENST00000471322 DZIP1Q86YF9 867 aaKnown RBP20.67■□□□□ 0.9
HSPG2-208ENST00000471322 MTMR14Q8NCE2 650 aa20.67■□□□□ 0.9
HSPG2-208ENST00000471322 TNPO1Q92973 898 aaKnown RBP20.67■□□□□ 0.9
HSPG2-208ENST00000471322 TAF6LQ9Y6J9 622 aa20.67■□□□□ 0.9
HSPG2-208ENST00000471322 MYO1BO43795 1136 aa20.67■□□□□ 0.9
HSPG2-208ENST00000471322 FGAP02671 866 aa20.67■□□□□ 0.9
HSPG2-208ENST00000471322 GNAT2P19087 354 aa20.67■□□□□ 0.9
HSPG2-208ENST00000471322 CACNB3P54284 484 aa20.67■□□□□ 0.9
HSPG2-208ENST00000471322 DHX32Q7L7V1 743 aaKnown RBP20.67■□□□□ 0.9
HSPG2-208ENST00000471322 RAI14Q9P0K7 980 aa20.67■□□□□ 0.9
HSPG2-208ENST00000471322 CELF2O95319 508 aaKnown RBP20.66■□□□□ 0.9
HSPG2-208ENST00000471322 MCM4P33991 863 aa20.66■□□□□ 0.9
HSPG2-208ENST00000471322 MECOMQ03112 1051 aa20.66■□□□□ 0.9
HSPG2-208ENST00000471322 ALX1Q15699 326 aa20.66■□□□□ 0.9
HSPG2-208ENST00000471322 CST9Q5W186 159 aa20.66■□□□□ 0.9
HSPG2-208ENST00000471322 CLEC17AQ6ZS10 378 aa20.66■□□□□ 0.9
HSPG2-208ENST00000471322 STRBPQ96SI9 672 aaKnown RBP20.66■□□□□ 0.9
HSPG2-208ENST00000471322 E7EWF7 191 aa20.65■□□□□ 0.9
HSPG2-208ENST00000471322 FOXP2O15409 715 aa20.65■□□□□ 0.9
HSPG2-208ENST00000471322 APOBEC3HQ6NTF7 200 aaKnown RBP20.65■□□□□ 0.9
HSPG2-208ENST00000471322 ZNF384Q8TF68 577 aa20.65■□□□□ 0.9
HSPG2-208ENST00000471322 DAGLAQ9Y4D2 1042 aa20.65■□□□□ 0.9
HSPG2-208ENST00000471322 PATL2C9JE40 543 aaKnown RBP20.64■□□□□ 0.9
HSPG2-208ENST00000471322 ZNF213O14771 459 aa20.64■□□□□ 0.9
HSPG2-208ENST00000471322 PTMSP20962 102 aa20.64■□□□□ 0.9
HSPG2-208ENST00000471322 HDLBPQ00341 1268 aaKnown RBP20.64■□□□□ 0.9
HSPG2-208ENST00000471322 SPTY2D1Q68D10 685 aaPredicted RBP20.64■□□□□ 0.9
HSPG2-208ENST00000471322 ZDHHC15Q96MV8 337 aa20.64■□□□□ 0.9
HSPG2-208ENST00000471322 ZNF70Q9UC06 446 aaPredicted RBP20.64■□□□□ 0.9
HSPG2-208ENST00000471322 ZMYM6O95789 1325 aa20.64■□□□□ 0.89
HSPG2-208ENST00000471322 DDX11L8A8MPP1 907 aa20.64■□□□□ 0.89
HSPG2-208ENST00000471322 TCP10L2B9ZVM9 353 aa20.64■□□□□ 0.89
HSPG2-208ENST00000471322 HHIPL2Q6UWX4 724 aa20.64■□□□□ 0.89
HSPG2-208ENST00000471322 CDCA5Q96FF9 252 aa20.64■□□□□ 0.89
HSPG2-208ENST00000471322 PITPNM2Q9BZ72 1349 aa20.63■□□□□ 0.89
HSPG2-208ENST00000471322 TMEM88BA6NKF7 163 aa20.63■□□□□ 0.89
HSPG2-208ENST00000471322 APPP05067 770 aa20.63■□□□□ 0.89
HSPG2-208ENST00000471322 PDIA4P13667 645 aaKnown RBP20.63■□□□□ 0.89
HSPG2-208ENST00000471322 SPDYE2Q495Y8 402 aa20.63■□□□□ 0.89
HSPG2-208ENST00000471322 STOX1Q6ZVD7 989 aa20.63■□□□□ 0.89
HSPG2-208ENST00000471322 NSUN4Q96CB9 384 aaKnown RBP20.63■□□□□ 0.89
HSPG2-208ENST00000471322 DEFB129Q9H1M3 183 aa20.63■□□□□ 0.89
HSPG2-208ENST00000471322 MYH7P12883 1935 aa20.62■□□□□ 0.89
HSPG2-208ENST00000471322 MBD4O95243 580 aa20.62■□□□□ 0.89
HSPG2-208ENST00000471322 CYP7A1P22680 504 aa20.62■□□□□ 0.89
HSPG2-208ENST00000471322 EXOSC10Q01780 885 aaKnown RBP20.62■□□□□ 0.89
HSPG2-208ENST00000471322 TOB2Q14106 344 aaPredicted RBP20.62■□□□□ 0.89
HSPG2-208ENST00000471322 APOBEC3FQ8IUX4 373 aaKnown RBP20.62■□□□□ 0.89
HSPG2-208ENST00000471322 MRIQ9BWK5 157 aa20.62■□□□□ 0.89
HSPG2-208ENST00000471322 NACAP1Q9BZK3 213 aa20.62■□□□□ 0.89
HSPG2-208ENST00000471322 TPCN1Q9ULQ1 816 aa20.62■□□□□ 0.89
HSPG2-208ENST00000471322 ABT1Q9ULW3 272 aaKnown RBP20.62■□□□□ 0.89
HSPG2-208ENST00000471322 SMC3Q9UQE7 1217 aa20.62■□□□□ 0.89
HSPG2-208ENST00000471322 FGD1P98174 961 aa20.61■□□□□ 0.89
HSPG2-208ENST00000471322 ME3Q16798 604 aa20.61■□□□□ 0.89
HSPG2-208ENST00000471322 FBXL16Q8N461 479 aa20.61■□□□□ 0.89
HSPG2-208ENST00000471322 CHMP4CQ96CF2 233 aa20.61■□□□□ 0.89
HSPG2-208ENST00000471322 GOLGA6L22H0YM25 854 aa20.6■□□□□ 0.89
HSPG2-208ENST00000471322 CDC42EP5Q6NZY7 148 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms