RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 MAP3K10Q02779 954 aa11.23□□□□□ -0.61
SF3A1-206ENST00000471037 GPAT2Q6NUI2 795 aa11.23□□□□□ -0.61
SF3A1-206ENST00000471037 ZGPATQ8N5A5 531 aaKnown RBP11.23□□□□□ -0.61
SF3A1-206ENST00000471037 USP40Q9NVE5 1235 aa11.23□□□□□ -0.61
SF3A1-206ENST00000471037 CEP126Q9P2H0 1117 aa11.23□□□□□ -0.61
SF3A1-206ENST00000471037 GAKO14976 1311 aa11.23□□□□□ -0.61
SF3A1-206ENST00000471037 PDS5AQ29RF7 1337 aaKnown RBP11.23□□□□□ -0.61
SF3A1-206ENST00000471037 MYPNQ86TC9 1320 aa11.23□□□□□ -0.61
SF3A1-206ENST00000471037 A0A0G2JLL6 359 aaPredicted RBP11.22□□□□□ -0.61
SF3A1-206ENST00000471037 PHF20L1A8MW92 1017 aa11.22□□□□□ -0.61
SF3A1-206ENST00000471037 H0YGN5 161 aa11.22□□□□□ -0.61
SF3A1-206ENST00000471037 FMNL1O95466 1100 aaPredicted RBP11.22□□□□□ -0.61
SF3A1-206ENST00000471037 GJB1P08034 283 aa11.22□□□□□ -0.61
SF3A1-206ENST00000471037 TRIM27P14373 513 aa11.22□□□□□ -0.61
SF3A1-206ENST00000471037 PHKA1P46020 1223 aa11.22□□□□□ -0.61
SF3A1-206ENST00000471037 GJA8P48165 433 aa11.22□□□□□ -0.61
SF3A1-206ENST00000471037 RGS3P49796 1198 aa11.22□□□□□ -0.61
SF3A1-206ENST00000471037 PRRT2Q7Z6L0 340 aaPredicted RBP11.22□□□□□ -0.61
SF3A1-206ENST00000471037 UBE2Q1Q7Z7E8 422 aa11.22□□□□□ -0.61
SF3A1-206ENST00000471037 ZFPM1Q8IX07 1006 aa11.22□□□□□ -0.61
SF3A1-206ENST00000471037 FTSJ3Q8IY81 847 aaKnown RBP11.22□□□□□ -0.61
SF3A1-206ENST00000471037 SCYL3Q8IZE3 742 aa11.22□□□□□ -0.61
SF3A1-206ENST00000471037 RAET1EQ8TD07 263 aa11.22□□□□□ -0.61
SF3A1-206ENST00000471037 SIL1Q9H173 461 aa11.22□□□□□ -0.61
SF3A1-206ENST00000471037 COPRSQ9NQ92 184 aa11.22□□□□□ -0.61
SF3A1-206ENST00000471037 SLC45A1Q9Y2W3 748 aa11.22□□□□□ -0.61
SF3A1-206ENST00000471037 ECM2O94769 699 aaPredicted RBP11.21□□□□□ -0.61
SF3A1-206ENST00000471037 CYP2C8P10632 490 aa11.21□□□□□ -0.61
SF3A1-206ENST00000471037 CCL5P13501 91 aa11.21□□□□□ -0.61
SF3A1-206ENST00000471037 PTPRAP18433 802 aa11.21□□□□□ -0.61
SF3A1-206ENST00000471037 FCGRTP55899 365 aa11.21□□□□□ -0.61
SF3A1-206ENST00000471037 PRKCZQ05513 592 aa11.21□□□□□ -0.61
SF3A1-206ENST00000471037 CCDC102BQ68D86 513 aa11.21□□□□□ -0.61
SF3A1-206ENST00000471037 FASTKD5Q7L8L6 764 aaKnown RBP11.21□□□□□ -0.61
SF3A1-206ENST00000471037 SLAIN1Q8ND83 568 aa11.21□□□□□ -0.61
SF3A1-206ENST00000471037 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
SF3A1-206ENST00000471037 HDAC5Q9UQL6 1122 aa11.21□□□□□ -0.61
SF3A1-206ENST00000471037 ZHX2Q9Y6X8 837 aa11.21□□□□□ -0.61
SF3A1-206ENST00000471037 UBXN2AP68543 259 aa11.2□□□□□ -0.62
SF3A1-206ENST00000471037 RASGRF1Q13972 1273 aa11.2□□□□□ -0.62
SF3A1-206ENST00000471037 SH3BP5LQ7L8J4 393 aa11.2□□□□□ -0.62
SF3A1-206ENST00000471037 SLF2Q8IX21 1173 aa11.2□□□□□ -0.62
SF3A1-206ENST00000471037 PICK1Q9NRD5 415 aa11.2□□□□□ -0.62
SF3A1-206ENST00000471037 PA2G4Q9UQ80 394 aaKnown RBP11.2□□□□□ -0.62
SF3A1-206ENST00000471037 AFG3L2Q9Y4W6 797 aa11.2□□□□□ -0.62
SF3A1-206ENST00000471037 LRRFIP2Q9Y608 721 aaKnown RBP11.2□□□□□ -0.62
SF3A1-206ENST00000471037 AK9Q5TCS8 1911 aa11.19□□□□□ -0.62
SF3A1-206ENST00000471037 DOCK1Q14185 1865 aa11.19□□□□□ -0.62
SF3A1-206ENST00000471037 DDTLA6NHG4 134 aaPredicted RBP11.19□□□□□ -0.62
SF3A1-206ENST00000471037 CTNND1O60716 968 aaKnown RBP11.19□□□□□ -0.62
SF3A1-206ENST00000471037 NPM3O75607 178 aaKnown RBP11.19□□□□□ -0.62
SF3A1-206ENST00000471037 CAPN2P17655 700 aa11.19□□□□□ -0.62
SF3A1-206ENST00000471037 ADORA1P30542 326 aa11.19□□□□□ -0.62
SF3A1-206ENST00000471037 ERICH6BQ5W0A0 696 aa11.19□□□□□ -0.62
SF3A1-206ENST00000471037 CHRDL2Q6WN34 429 aa11.19□□□□□ -0.62
SF3A1-206ENST00000471037 DZIP1Q86YF9 867 aaKnown RBP11.19□□□□□ -0.62
SF3A1-206ENST00000471037 PXYLP1Q8TE99 480 aa11.19□□□□□ -0.62
SF3A1-206ENST00000471037 U2AF1L4Q8WU68 220 aaKnown RBP11.19□□□□□ -0.62
SF3A1-206ENST00000471037 HTATIP2Q9BUP3 242 aa11.19□□□□□ -0.62
SF3A1-206ENST00000471037 RNF208Q9H0X6 261 aa11.19□□□□□ -0.62
SF3A1-206ENST00000471037 DDX4Q9NQI0 724 aaKnown RBP11.19□□□□□ -0.62
SF3A1-206ENST00000471037 PTPRFP10586 1907 aa11.19□□□□□ -0.62
SF3A1-206ENST00000471037 MYH2Q9UKX2 1941 aa11.19□□□□□ -0.62
SF3A1-206ENST00000471037 MGAMO43451 1857 aa11.19□□□□□ -0.62
SF3A1-206ENST00000471037 COL2A1P02458 1487 aaPredicted RBP11.19□□□□□ -0.62
SF3A1-206ENST00000471037 MROH7-TTC4A0A0A0MT08 1334 aa11.18□□□□□ -0.62
SF3A1-206ENST00000471037 TBC1D12O60347 775 aa11.18□□□□□ -0.62
SF3A1-206ENST00000471037 RLBP1P12271 317 aa11.18□□□□□ -0.62
SF3A1-206ENST00000471037 BTDP43251 543 aa11.18□□□□□ -0.62
SF3A1-206ENST00000471037 MTX1Q13505 466 aa11.18□□□□□ -0.62
SF3A1-206ENST00000471037 IRF5Q13568 498 aa11.18□□□□□ -0.62
SF3A1-206ENST00000471037 C20orf194Q5TEA3 1177 aa11.18□□□□□ -0.62
SF3A1-206ENST00000471037 SPTY2D1Q68D10 685 aaPredicted RBP11.18□□□□□ -0.62
SF3A1-206ENST00000471037 ZSCAN29Q8IWY8 852 aaPredicted RBP11.18□□□□□ -0.62
SF3A1-206ENST00000471037 PANK1Q8TE04 598 aa11.18□□□□□ -0.62
SF3A1-206ENST00000471037 CLUAP1Q96AJ1 413 aa11.18□□□□□ -0.62
SF3A1-206ENST00000471037 PRO3102Q9H379 93 aa11.18□□□□□ -0.62
SF3A1-206ENST00000471037 BIN2Q9UBW5 565 aaPredicted RBP11.18□□□□□ -0.62
SF3A1-206ENST00000471037 ABCF2Q9UG63 623 aa11.18□□□□□ -0.62
SF3A1-206ENST00000471037 GABRQQ9UN88 632 aa11.18□□□□□ -0.62
SF3A1-206ENST00000471037 CEP290O15078 2479 aa11.18□□□□□ -0.62
SF3A1-206ENST00000471037 PHIPQ8WWQ0 1821 aa11.18□□□□□ -0.62
SF3A1-206ENST00000471037 GPR75-ASB3A0A0A6YYF3 556 aa11.17□□□□□ -0.62
SF3A1-206ENST00000471037 A0A1B0GUL7 405 aa11.17□□□□□ -0.62
SF3A1-206ENST00000471037 ADCY3O60266 1144 aa11.17□□□□□ -0.62
SF3A1-206ENST00000471037 SGPL1O95470 568 aa11.17□□□□□ -0.62
SF3A1-206ENST00000471037 FLT3LGP49771 235 aa11.17□□□□□ -0.62
SF3A1-206ENST00000471037 RHBDL3P58872 404 aa11.17□□□□□ -0.62
SF3A1-206ENST00000471037 IRX6P78412 446 aaPredicted RBP11.17□□□□□ -0.62
SF3A1-206ENST00000471037 MVPQ14764 893 aaKnown RBP11.17□□□□□ -0.62
SF3A1-206ENST00000471037 GADL1Q6ZQY3 521 aa11.17□□□□□ -0.62
SF3A1-206ENST00000471037 SMCR8Q8TEV9 937 aaPredicted RBP11.17□□□□□ -0.62
SF3A1-206ENST00000471037 DPF3Q92784 378 aa11.17□□□□□ -0.62
SF3A1-206ENST00000471037 MEIS3Q99687 375 aa11.17□□□□□ -0.62
SF3A1-206ENST00000471037 UNC93B1Q9H1C4 597 aa11.17□□□□□ -0.62
SF3A1-206ENST00000471037 AGTPBP1Q9UPW5 1226 aa11.17□□□□□ -0.62
SF3A1-206ENST00000471037 TNNQ9UQP3 1299 aa11.17□□□□□ -0.62
SF3A1-206ENST00000471037 AKAP2Q9Y2D5 859 aa11.17□□□□□ -0.62
SF3A1-206ENST00000471037 TRIOBPQ9H2D6 2365 aa11.17□□□□□ -0.62
SF3A1-206ENST00000471037 TRIM75PA6NK02 468 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms