RNA–Protein interactions for RNA: ENST00000470972.5

SLC44A1-205, Transcript of solute carrier family 44 member 1, humanhuman

TSL 1 (best)

Gene SLC44A1, Length 10,433 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-205ENST00000470972 NIP7Q9Y221 180 aaKnown RBP eCLIP12.74□□□□□ -0.37
SLC44A1-205ENST00000470972 PPP1R12AO14974 1030 aaPredicted RBP12.74□□□□□ -0.37
SLC44A1-205ENST00000470972 SMTNP53814 917 aa12.74□□□□□ -0.37
SLC44A1-205ENST00000470972 RPS6KA2Q15349 733 aa12.74□□□□□ -0.37
SLC44A1-205ENST00000470972 IFT20Q8IY31 132 aa12.74□□□□□ -0.37
SLC44A1-205ENST00000470972 RNF10Q8N5U6 811 aaKnown RBP12.74□□□□□ -0.37
SLC44A1-205ENST00000470972 MORC4Q8TE76 937 aa12.74□□□□□ -0.37
SLC44A1-205ENST00000470972 TPX2Q9ULW0 747 aaKnown RBP12.74□□□□□ -0.37
SLC44A1-205ENST00000470972 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
SLC44A1-205ENST00000470972 CCDC38Q502W7 563 aa12.74□□□□□ -0.37
SLC44A1-205ENST00000470972 IFNL2Q8IZJ0 200 aa12.74□□□□□ -0.37
SLC44A1-205ENST00000470972 FNBP4Q8N3X1 1017 aaPredicted RBP12.74□□□□□ -0.37
SLC44A1-205ENST00000470972 ZRANB1Q9UGI0 708 aa12.74□□□□□ -0.37
SLC44A1-205ENST00000470972 PHF8Q9UPP1 1060 aa12.74□□□□□ -0.37
SLC44A1-205ENST00000470972 PTPDC1A2A3K4 754 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 OPHN1O60890 802 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 TAOK1Q7L7X3 1001 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 CFAP65Q6ZU64 1925 aaKnown RBP12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 SYNRGQ9UMZ2 1314 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 GIGYF1O75420 1035 aaPredicted RBP12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 KRT15P19012 456 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 TUBB4BP68371 445 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 STRN3Q13033 797 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 ARHGAP42A6NI28 874 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 KRT19P08727 400 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 MYCLP12524 364 aaPredicted RBP12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 SLC39A6Q13433 755 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 UBE2Q2Q8WVN8 375 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 RAD51AP2Q09MP3 1159 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 DCUN1D2Q6PH85 259 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 IQUBQ8NA54 791 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 MYO1AQ9UBC5 1043 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 CALUO43852 315 aaPredicted RBP12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 PDE4DQ08499 809 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 TBC1D8BQ0IIM8 1120 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 PDCD7Q8N8D1 485 aaKnown RBP12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 ANKRD42Q8N9B4 389 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 NOX5Q96PH1 765 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 BAG2O95816 211 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 ELP1O95163 1332 aa12.73□□□□□ -0.37
SLC44A1-205ENST00000470972 VPS37BQ9H9H4 285 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 INPP1P49441 399 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 CYP26C1Q6V0L0 522 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 ARHGAP24Q8N264 748 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 POGZQ7Z3K3 1410 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 VGLL3A8MV65 326 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 CEP104O60308 925 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 AK2P54819 239 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 MUM1Q2TAK8 710 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 DENND2CQ68D51 928 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 GOLGA6BA6NDN3 693 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 DHX29Q7Z478 1369 aaKnown RBP12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 SPDYE16A6NNV3 312 aaPredicted RBP12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 ZYXQ15942 572 aaKnown RBP12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 C4orf50Q6ZRC1 276 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 NSMCE1Q8WV22 266 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 USH1CQ9Y6N9 552 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 SPOUT1Q5T280 376 aaKnown RBP12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 SETSIPP0DME0 302 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 PDE1AP54750 535 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 COG7P83436 770 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 ELF2Q15723 593 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 PRG4Q92954 1404 aaPredicted RBP12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 NOP56O00567 594 aaKnown RBP12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 SEPT10Q9P0V9 454 aa12.72□□□□□ -0.37
SLC44A1-205ENST00000470972 SLC12A2P55011 1212 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 CREB3L3Q68CJ9 461 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 C17orf53Q8N3J3 647 aaPredicted RBP12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 RBSNQ9H1K0 784 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 GJA3Q9Y6H8 435 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 CCDC105Q8IYK2 499 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 GDAP1L1Q96MZ0 367 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 FBLN1P23142 703 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 CLCN1P35523 988 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 RBBP5Q15291 538 aaKnown RBP12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 RUFY3Q7L099 469 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 KRT28Q7Z3Y7 464 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 POTEDQ86YR6 584 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 DCLK2Q8N568 766 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 SCYL1Q96KG9 808 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 SPECC1L-ADORA2AF8WAN1 911 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 NCAPH2Q6IBW4 605 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 COPS6Q7L5N1 327 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 NLRP3Q96P20 1036 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 CTTNBP2NLQ9P2B4 639 aa12.71□□□□□ -0.37
SLC44A1-205ENST00000470972 GABPB2Q8TAK5 448 aaPredicted RBP12.71□□□□□ -0.38
SLC44A1-205ENST00000470972 LDHBP07195 334 aaKnown RBP12.71□□□□□ -0.38
SLC44A1-205ENST00000470972 IL1RL1Q01638 556 aa12.71□□□□□ -0.38
SLC44A1-205ENST00000470972 ZNF408Q9H9D4 720 aa12.71□□□□□ -0.38
SLC44A1-205ENST00000470972 MX2P20592 715 aa12.71□□□□□ -0.38
SLC44A1-205ENST00000470972 VWA3BQ502W6 1294 aa12.71□□□□□ -0.38
SLC44A1-205ENST00000470972 PDZD8Q8NEN9 1154 aa12.71□□□□□ -0.38
SLC44A1-205ENST00000470972 LMBR1LQ6UX01 489 aa12.7□□□□□ -0.38
SLC44A1-205ENST00000470972 GRM8O00222 908 aa12.7□□□□□ -0.38
SLC44A1-205ENST00000470972 TSTA3Q13630 321 aaPredicted RBP12.7□□□□□ -0.38
SLC44A1-205ENST00000470972 CNNM4Q6P4Q7 775 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms