RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 GTF2IP78347 998 aa7.65□□□□□ -1.18
VARS-222ENST00000470953 PPIL2Q13356 520 aa7.65□□□□□ -1.18
VARS-222ENST00000470953 MOGSQ13724 837 aa7.65□□□□□ -1.18
VARS-222ENST00000470953 DLGAP5Q15398 846 aa7.65□□□□□ -1.18
VARS-222ENST00000470953 PRRC2BQ5JSZ5 2229 aaKnown RBP7.65□□□□□ -1.18
VARS-222ENST00000470953 FAM208BQ5VWN6 2430 aa7.65□□□□□ -1.18
VARS-222ENST00000470953 LHX8Q68G74 356 aa7.65□□□□□ -1.18
VARS-222ENST00000470953 TTLL5Q6EMB2 1281 aa7.65□□□□□ -1.18
VARS-222ENST00000470953 ERO1BQ86YB8 467 aa7.65□□□□□ -1.18
VARS-222ENST00000470953 MYO3BQ8WXR4 1341 aa7.65□□□□□ -1.18
VARS-222ENST00000470953 TRIB2Q92519 343 aa7.65□□□□□ -1.18
VARS-222ENST00000470953 JARID2Q92833 1246 aaPredicted RBP7.65□□□□□ -1.18
VARS-222ENST00000470953 ZKSCAN4Q969J2 545 aaPredicted RBP7.65□□□□□ -1.18
VARS-222ENST00000470953 ISCA1Q9BUE6 129 aa7.65□□□□□ -1.18
VARS-222ENST00000470953 PDLIM7Q9NR12 457 aa7.65□□□□□ -1.18
VARS-222ENST00000470953 DMXL1Q9Y485 3027 aa7.65□□□□□ -1.18
VARS-222ENST00000470953 TRIOO75962 3097 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 MED23Q9ULK4 1368 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 POTEB3A0JP26 581 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 SPDYE2BA6NHP3 402 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 F8W031 263 aaPredicted RBP7.64□□□□□ -1.19
VARS-222ENST00000470953 SPDYE6P0CI01 402 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 PRKAR2AP13861 404 aaKnown RBP7.64□□□□□ -1.19
VARS-222ENST00000470953 SSTR3P32745 418 aaPredicted RBP7.64□□□□□ -1.19
VARS-222ENST00000470953 CFAP100Q494V2 611 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 MAP3K21Q5TCX8 1036 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 POTEBQ6S5H4 581 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 DGLUCYQ7Z3D6 616 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 FAM178BQ8IXR5 827 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 TEPSINQ96N21 525 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 PARK7Q99497 189 aaKnown RBP7.64□□□□□ -1.19
VARS-222ENST00000470953 KCNH4Q9UQ05 1017 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 TRPC6Q9Y210 931 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 GVINP1Q7Z2Y8 2422 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 CACNA1HO95180 2353 aa7.64□□□□□ -1.19
VARS-222ENST00000470953 PRR23AA6NEV1 266 aa7.63□□□□□ -1.19
VARS-222ENST00000470953 PER1O15534 1290 aaPredicted RBP7.63□□□□□ -1.19
VARS-222ENST00000470953 CCND3P30281 292 aaPredicted RBP7.63□□□□□ -1.19
VARS-222ENST00000470953 PNISRQ8TF01 805 aaKnown RBP7.63□□□□□ -1.19
VARS-222ENST00000470953 HLA-CQ95604 372 aa7.63□□□□□ -1.19
VARS-222ENST00000470953 COA7Q96BR5 231 aa7.63□□□□□ -1.19
VARS-222ENST00000470953 COA1Q9GZY4 146 aa7.63□□□□□ -1.19
VARS-222ENST00000470953 NKX2-4Q9H2Z4 354 aa7.63□□□□□ -1.19
VARS-222ENST00000470953 ALG13Q9NP73 1137 aaKnown RBP7.63□□□□□ -1.19
VARS-222ENST00000470953 BSDC1Q9NW68 430 aaPredicted RBP7.63□□□□□ -1.19
VARS-222ENST00000470953 MINPP1Q9UNW1 487 aa7.63□□□□□ -1.19
VARS-222ENST00000470953 NUDCQ9Y266 331 aa7.63□□□□□ -1.19
VARS-222ENST00000470953 RLFQ13129 1914 aa7.62□□□□□ -1.19
VARS-222ENST00000470953 GBF1Q92538 1859 aa7.62□□□□□ -1.19
VARS-222ENST00000470953 PLXNB2O15031 1838 aa7.62□□□□□ -1.19
VARS-222ENST00000470953 ZIC2O95409 532 aaPredicted RBP7.62□□□□□ -1.19
VARS-222ENST00000470953 NEFMP07197 916 aa7.62□□□□□ -1.19
VARS-222ENST00000470953 ZEB1P37275 1124 aaPredicted RBP7.62□□□□□ -1.19
VARS-222ENST00000470953 MMP14P50281 582 aa7.62□□□□□ -1.19
VARS-222ENST00000470953 CCT4P50991 539 aaKnown RBP7.62□□□□□ -1.19
VARS-222ENST00000470953 TRIM60Q495X7 471 aa7.62□□□□□ -1.19
VARS-222ENST00000470953 KRT40Q6A162 431 aa7.62□□□□□ -1.19
VARS-222ENST00000470953 GPAT2Q6NUI2 795 aa7.62□□□□□ -1.19
VARS-222ENST00000470953 ATOH1Q92858 354 aaPredicted RBP7.62□□□□□ -1.19
VARS-222ENST00000470953 RMDN1Q96DB5 314 aa7.62□□□□□ -1.19
VARS-222ENST00000470953 TMEM39BQ9GZU3 492 aa7.62□□□□□ -1.19
VARS-222ENST00000470953 MTCH2Q9Y6C9 303 aa7.62□□□□□ -1.19
VARS-222ENST00000470953 KMT2EQ8IZD2 1858 aa7.62□□□□□ -1.19
VARS-222ENST00000470953 ARAP2Q8WZ64 1704 aa7.61□□□□□ -1.19
VARS-222ENST00000470953 ASH1LQ9NR48 2969 aaKnown RBP7.61□□□□□ -1.19
VARS-222ENST00000470953 SNAP23O00161 211 aa7.61□□□□□ -1.19
VARS-222ENST00000470953 KRT24Q2M2I5 525 aa7.61□□□□□ -1.19
VARS-222ENST00000470953 SAMD1Q6SPF0 538 aaPredicted RBP7.61□□□□□ -1.19
VARS-222ENST00000470953 ANKRD18AQ8IVF6 992 aa7.61□□□□□ -1.19
VARS-222ENST00000470953 PLBD2Q8NHP8 589 aa7.61□□□□□ -1.19
VARS-222ENST00000470953 GJD2Q9UKL4 321 aa7.61□□□□□ -1.19
VARS-222ENST00000470953 JAG2Q9Y219 1238 aa7.61□□□□□ -1.19
VARS-222ENST00000470953 YBX2Q9Y2T7 364 aaKnown RBP7.61□□□□□ -1.19
VARS-222ENST00000470953 DAGLAQ9Y4D2 1042 aa7.61□□□□□ -1.19
VARS-222ENST00000470953 VPS13AQ96RL7 3174 aa7.61□□□□□ -1.19
VARS-222ENST00000470953 ASPMQ8IZT6 3477 aa7.61□□□□□ -1.19
VARS-222ENST00000470953 DLG5Q8TDM6 1919 aa7.6□□□□□ -1.19
VARS-222ENST00000470953 TCP10L2B9ZVM9 353 aa7.6□□□□□ -1.19
VARS-222ENST00000470953 PROB1E7EW31 1015 aa7.6□□□□□ -1.19
VARS-222ENST00000470953 RFXAPO00287 272 aa7.6□□□□□ -1.19
VARS-222ENST00000470953 MYO1BO43795 1136 aa7.6□□□□□ -1.19
VARS-222ENST00000470953 FPGSQ05932 587 aa7.6□□□□□ -1.19
VARS-222ENST00000470953 CACNB2Q08289 660 aaPredicted RBP7.6□□□□□ -1.19
VARS-222ENST00000470953 CCDC152Q4G0S7 254 aa7.6□□□□□ -1.19
VARS-222ENST00000470953 WRNIP1Q96S55 665 aa7.6□□□□□ -1.19
VARS-222ENST00000470953 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.6□□□□□ -1.192e-8■■■■□ 22.6
VARS-222ENST00000470953 TDRD3Q9H7E2 651 aaKnown RBP7.6□□□□□ -1.19
VARS-222ENST00000470953 ZNF70Q9UC06 446 aaPredicted RBP7.6□□□□□ -1.19
VARS-222ENST00000470953 BRWD1Q9NSI6 2320 aa7.6□□□□□ -1.19
VARS-222ENST00000470953 TECTAO75443 2155 aa7.59□□□□□ -1.19
VARS-222ENST00000470953 PDE8AO60658 829 aa7.59□□□□□ -1.19
VARS-222ENST00000470953 IL9P15248 144 aa7.59□□□□□ -1.19
VARS-222ENST00000470953 PPP2R1AP30153 589 aa7.59□□□□□ -1.19
VARS-222ENST00000470953 RBM5P52756 815 aaKnown RBP eCLIP7.59□□□□□ -1.19
VARS-222ENST00000470953 PPATQ06203 517 aa7.59□□□□□ -1.19
VARS-222ENST00000470953 SPDYE2Q495Y8 402 aa7.59□□□□□ -1.19
VARS-222ENST00000470953 SLC39A5Q6ZMH5 540 aa7.59□□□□□ -1.19
VARS-222ENST00000470953 PRRX2Q99811 253 aa7.59□□□□□ -1.19
VARS-222ENST00000470953 SLC28A3Q9HAS3 691 aa7.59□□□□□ -1.19
VARS-222ENST00000470953 CD209Q9NNX6 404 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms