RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 MFSD14BQ5SR56 506 aa11.2□□□□□ -0.62
XRN1-208ENST00000470537 TSPYL6Q8N831 410 aa11.2□□□□□ -0.62
XRN1-208ENST00000470537 CNNM1Q9NRU3 951 aa11.2□□□□□ -0.62
XRN1-208ENST00000470537 TMOD2Q9NZR1 351 aa11.2□□□□□ -0.62
XRN1-208ENST00000470537 ZNF70Q9UC06 446 aaPredicted RBP11.2□□□□□ -0.62
XRN1-208ENST00000470537 TTF2Q9UNY4 1162 aaKnown RBP11.2□□□□□ -0.62
XRN1-208ENST00000470537 ECM29Q5VYK3 1845 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 FAM205AQ6ZU69 1335 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 SMAPO00193 183 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 HIBADHP31937 336 aaKnown RBP11.19□□□□□ -0.62
XRN1-208ENST00000470537 GJA5P36382 358 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 HDLBPQ00341 1268 aaKnown RBP11.19□□□□□ -0.62
XRN1-208ENST00000470537 FLIIQ13045 1269 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 SNAPC2Q13487 334 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 UBE4AQ14139 1066 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 VPS37DQ86XT2 251 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 ERO1BQ86YB8 467 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 DZIP1LQ8IYY4 767 aaKnown RBP11.19□□□□□ -0.62
XRN1-208ENST00000470537 TBC1D22AQ8WUA7 517 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 DPF3Q92784 378 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 HTATIP2Q9BUP3 242 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 PTCH2Q9Y6C5 1203 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 BRCA2P51587 3418 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 SPEF2Q9C093 1822 aa11.19□□□□□ -0.62
XRN1-208ENST00000470537 LAMB1P07942 1786 aa11.18□□□□□ -0.62
XRN1-208ENST00000470537 PLIN1O60240 522 aa11.18□□□□□ -0.62
XRN1-208ENST00000470537 FRAT2O75474 233 aaPredicted RBP11.18□□□□□ -0.62
XRN1-208ENST00000470537 CASP7P55210 303 aa11.18□□□□□ -0.62
XRN1-208ENST00000470537 PRSS12P56730 875 aa11.18□□□□□ -0.62
XRN1-208ENST00000470537 VGLL4Q14135 290 aa11.18□□□□□ -0.62
XRN1-208ENST00000470537 CCDC27Q2M243 656 aa11.18□□□□□ -0.62
XRN1-208ENST00000470537 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.18□□□□□ -0.62
XRN1-208ENST00000470537 BRI3BPQ8WY22 251 aa11.18□□□□□ -0.62
XRN1-208ENST00000470537 TDRD3Q9H7E2 651 aaKnown RBP11.18□□□□□ -0.62
XRN1-208ENST00000470537 NR2E3Q9Y5X4 410 aa11.18□□□□□ -0.62
XRN1-208ENST00000470537 SSC5DA1L4H1 1573 aa11.17□□□□□ -0.62
XRN1-208ENST00000470537 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
XRN1-208ENST00000470537 TCP10L2B9ZVM9 353 aa11.17□□□□□ -0.62
XRN1-208ENST00000470537 H0YGN5 161 aa11.17□□□□□ -0.62
XRN1-208ENST00000470537 LACTBP83111 547 aaPredicted RBP11.17□□□□□ -0.62
XRN1-208ENST00000470537 E2F4Q16254 413 aa11.17□□□□□ -0.62
XRN1-208ENST00000470537 CAVIN4Q5BKX8 364 aa11.17□□□□□ -0.62
XRN1-208ENST00000470537 DCAF15Q66K64 600 aa11.17□□□□□ -0.62
XRN1-208ENST00000470537 SPRYD3Q8NCJ5 442 aa11.17□□□□□ -0.62
XRN1-208ENST00000470537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.17□□□□□ -0.62
XRN1-208ENST00000470537 TDRD7Q8NHU6 1098 aaKnown RBP11.17□□□□□ -0.62
XRN1-208ENST00000470537 MRIQ9BWK5 157 aa11.17□□□□□ -0.62
XRN1-208ENST00000470537 ZNF646O15015 1829 aaPredicted RBP11.16□□□□□ -0.62
XRN1-208ENST00000470537 IL16Q14005 1332 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 IRS2Q9Y4H2 1338 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 GRXCR2A6NFK2 248 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 SNAP23O00161 211 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 CRKP46108 304 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 FOXO4P98177 505 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 FKBP1CQ5VVH2 108 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 LMBR1LQ6UX01 489 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 G2E3Q7L622 706 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 FAM83AQ86UY5 434 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 FAM43AQ8N2R8 423 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 RAET1EQ8TD07 263 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 TSR2Q969E8 191 aaKnown RBP11.16□□□□□ -0.62
XRN1-208ENST00000470537 TEKT1Q969V4 418 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 TRIM47Q96LD4 638 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 TEPSINQ96N21 525 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 PRKRIP1Q9H875 184 aaPredicted RBP11.16□□□□□ -0.62
XRN1-208ENST00000470537 C9orf78Q9NZ63 289 aaPredicted RBP11.16□□□□□ -0.62
XRN1-208ENST00000470537 PCDHAC2Q9Y5I4 1007 aa11.16□□□□□ -0.62
XRN1-208ENST00000470537 MAST3O60307 1309 aa11.15□□□□□ -0.62
XRN1-208ENST00000470537 MYCP01106 439 aaPredicted RBP11.15□□□□□ -0.62
XRN1-208ENST00000470537 UBXN2AP68543 259 aa11.15□□□□□ -0.62
XRN1-208ENST00000470537 PPATQ06203 517 aa11.15□□□□□ -0.62
XRN1-208ENST00000470537 SH3TC2Q8TF17 1288 aa11.15□□□□□ -0.62
XRN1-208ENST00000470537 WRNIP1Q96S55 665 aa11.15□□□□□ -0.62
XRN1-208ENST00000470537 TMEM39BQ9GZU3 492 aa11.15□□□□□ -0.62
XRN1-208ENST00000470537 BIN2Q9UBW5 565 aaPredicted RBP11.15□□□□□ -0.62
XRN1-208ENST00000470537 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.62
XRN1-208ENST00000470537 JAG2Q9Y219 1238 aa11.15□□□□□ -0.62
XRN1-208ENST00000470537 SUGT1Q9Y2Z0 365 aa11.15□□□□□ -0.62
XRN1-208ENST00000470537 CACNA1FO60840 1977 aa11.15□□□□□ -0.62
XRN1-208ENST00000470537 MROH5Q6ZUA9 1318 aa11.14□□□□□ -0.63
XRN1-208ENST00000470537 CEP290O15078 2479 aa11.14□□□□□ -0.63
XRN1-208ENST00000470537 GRM8O00222 908 aa11.14□□□□□ -0.63
XRN1-208ENST00000470537 FMNL1O95466 1100 aaPredicted RBP11.14□□□□□ -0.63
XRN1-208ENST00000470537 GJB1P08034 283 aa11.14□□□□□ -0.63
XRN1-208ENST00000470537 GRK4P32298 578 aa11.14□□□□□ -0.63
XRN1-208ENST00000470537 PSMC4P43686 418 aa11.14□□□□□ -0.63
XRN1-208ENST00000470537 PPIL2Q13356 520 aa11.14□□□□□ -0.63
XRN1-208ENST00000470537 WWC1Q8IX03 1113 aa11.14□□□□□ -0.63
XRN1-208ENST00000470537 FAM84BQ96KN1 310 aaPredicted RBP11.14□□□□□ -0.63
XRN1-208ENST00000470537 SRRDQ9UH36 339 aa11.14□□□□□ -0.63
XRN1-208ENST00000470537 PNMA3Q9UL41 463 aa11.14□□□□□ -0.63
XRN1-208ENST00000470537 A0A1W2PPC1 479 aa11.13□□□□□ -0.63
XRN1-208ENST00000470537 BTBD19C9JJ37 291 aa11.13□□□□□ -0.63
XRN1-208ENST00000470537 IRF6O14896 467 aa11.13□□□□□ -0.63
XRN1-208ENST00000470537 GYG1P46976 350 aa11.13□□□□□ -0.63
XRN1-208ENST00000470537 GJA8P48165 433 aa11.13□□□□□ -0.63
XRN1-208ENST00000470537 LAPTM4AQ15012 233 aa11.13□□□□□ -0.63
XRN1-208ENST00000470537 TJAP1Q5JTD0 557 aa11.13□□□□□ -0.63
XRN1-208ENST00000470537 C17orf99Q6UX52 265 aa11.13□□□□□ -0.63
XRN1-208ENST00000470537 ANKRD23Q86SG2 305 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms