RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 BAG3O95817 575 aa17.23■□□□□ 0.35
TOP3B-215ENST00000470338 ATP5JP18859 108 aa17.23■□□□□ 0.35
TOP3B-215ENST00000470338 GJA5P36382 358 aa17.23■□□□□ 0.35
TOP3B-215ENST00000470338 INHBEP58166 350 aa17.23■□□□□ 0.35
TOP3B-215ENST00000470338 MAP3K10Q02779 954 aa17.23■□□□□ 0.35
TOP3B-215ENST00000470338 AAMPQ13685 434 aa17.23■□□□□ 0.35
TOP3B-215ENST00000470338 VGLL4Q14135 290 aa17.23■□□□□ 0.35
TOP3B-215ENST00000470338 TTF1Q15361 905 aaPredicted RBP17.23■□□□□ 0.35
TOP3B-215ENST00000470338 NOL10Q9BSC4 688 aaKnown RBP17.23■□□□□ 0.35
TOP3B-215ENST00000470338 ELP3Q9H9T3 547 aa17.23■□□□□ 0.35
TOP3B-215ENST00000470338 CSADQ9Y600 493 aa17.23■□□□□ 0.35
TOP3B-215ENST00000470338 ATRNL1Q5VV63 1379 aa17.23■□□□□ 0.35
TOP3B-215ENST00000470338 DDTLA6NHG4 134 aaPredicted RBP17.22■□□□□ 0.35
TOP3B-215ENST00000470338 MANSC4A6NHS7 340 aaPredicted RBP17.22■□□□□ 0.35
TOP3B-215ENST00000470338 TRPA1O75762 1119 aa17.22■□□□□ 0.35
TOP3B-215ENST00000470338 PLCG2P16885 1265 aa17.22■□□□□ 0.35
TOP3B-215ENST00000470338 SREBF2Q12772 1141 aa17.22■□□□□ 0.35
TOP3B-215ENST00000470338 MAP3K12Q12852 859 aa17.22■□□□□ 0.35
TOP3B-215ENST00000470338 PICALMQ13492 652 aa17.22■□□□□ 0.35
TOP3B-215ENST00000470338 SH3RF3Q8TEJ3 882 aaPredicted RBP17.22■□□□□ 0.35
TOP3B-215ENST00000470338 OPTNQ96CV9 577 aa17.22■□□□□ 0.35
TOP3B-215ENST00000470338 WRNIP1Q96S55 665 aa17.22■□□□□ 0.35
TOP3B-215ENST00000470338 BCL11AQ9H165 835 aa17.22■□□□□ 0.35
TOP3B-215ENST00000470338 AATFQ9NY61 560 aaKnown RBP eCLIP17.22■□□□□ 0.35
TOP3B-215ENST00000470338 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.22■□□□□ 0.35
TOP3B-215ENST00000470338 COL2A1P02458 1487 aaPredicted RBP17.22■□□□□ 0.35
TOP3B-215ENST00000470338 MYH7P12883 1935 aa17.21■□□□□ 0.35
TOP3B-215ENST00000470338 CYP7A1P22680 504 aa17.21■□□□□ 0.35
TOP3B-215ENST00000470338 TEX11Q8IYF3 940 aa17.21■□□□□ 0.35
TOP3B-215ENST00000470338 MAGEB6Q8N7X4 407 aa17.21■□□□□ 0.35
TOP3B-215ENST00000470338 ZKSCAN4Q969J2 545 aaPredicted RBP17.21■□□□□ 0.35
TOP3B-215ENST00000470338 SNCAIPQ9Y6H5 919 aa17.21■□□□□ 0.35
TOP3B-215ENST00000470338 INPP5BP32019 993 aa17.2■□□□□ 0.34
TOP3B-215ENST00000470338 ZSCAN29Q8IWY8 852 aaPredicted RBP17.2■□□□□ 0.34
TOP3B-215ENST00000470338 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
TOP3B-215ENST00000470338 HAUS7Q99871 368 aa17.2■□□□□ 0.34
TOP3B-215ENST00000470338 OSBPL5Q9H0X9 879 aaPredicted RBP17.2■□□□□ 0.34
TOP3B-215ENST00000470338 BOLA2Q9H3K6 86 aa17.2■□□□□ 0.34
TOP3B-215ENST00000470338 MYH1P12882 1939 aa17.19■□□□□ 0.34
TOP3B-215ENST00000470338 TESPA1A2RU30 521 aaPredicted RBP17.19■□□□□ 0.34
TOP3B-215ENST00000470338 SPDYE5A6NIY4 337 aa17.19■□□□□ 0.34
TOP3B-215ENST00000470338 PHF20L1A8MW92 1017 aa17.19■□□□□ 0.34
TOP3B-215ENST00000470338 GOLIM4O00461 696 aa17.19■□□□□ 0.34
TOP3B-215ENST00000470338 HDAC1Q13547 482 aaPredicted RBP17.19■□□□□ 0.34
TOP3B-215ENST00000470338 ERO1BQ86YB8 467 aa17.19■□□□□ 0.34
TOP3B-215ENST00000470338 CERS3Q8IU89 383 aa17.19■□□□□ 0.34
TOP3B-215ENST00000470338 MS4A4AQ96JQ5 239 aa17.19■□□□□ 0.34
TOP3B-215ENST00000470338 DNAJC2Q99543 621 aaKnown RBP17.19■□□□□ 0.34
TOP3B-215ENST00000470338 SUPT16HQ9Y5B9 1047 aaKnown RBP17.19■□□□□ 0.34
TOP3B-215ENST00000470338 SIPA1L1O43166 1804 aa17.19■□□□□ 0.34
TOP3B-215ENST00000470338 TBC1D12O60347 775 aa17.18■□□□□ 0.34
TOP3B-215ENST00000470338 DYNLL1P63167 89 aaKnown RBP17.18■□□□□ 0.34
TOP3B-215ENST00000470338 NOL9Q5SY16 702 aaKnown RBP17.18■□□□□ 0.34
TOP3B-215ENST00000470338 IFNL1Q8IU54 200 aa17.18■□□□□ 0.34
TOP3B-215ENST00000470338 TGFBRAP1Q8WUH2 860 aa17.18■□□□□ 0.34
TOP3B-215ENST00000470338 EDC3Q96F86 508 aaKnown RBP17.18■□□□□ 0.34
TOP3B-215ENST00000470338 CFHR5Q9BXR6 569 aa17.18■□□□□ 0.34
TOP3B-215ENST00000470338 ECHDC1Q9NTX5 307 aa17.18■□□□□ 0.34
TOP3B-215ENST00000470338 PAG1Q9NWQ8 432 aa17.18■□□□□ 0.34
TOP3B-215ENST00000470338 ALDH1A1P00352 501 aa17.17■□□□□ 0.34
TOP3B-215ENST00000470338 PDE6AP16499 860 aa17.17■□□□□ 0.34
TOP3B-215ENST00000470338 SLC9C2Q5TAH2 1124 aa17.17■□□□□ 0.34
TOP3B-215ENST00000470338 MIGA1Q8NAN2 632 aa17.17■□□□□ 0.34
TOP3B-215ENST00000470338 OTUD5Q96G74 571 aa17.17■□□□□ 0.34
TOP3B-215ENST00000470338 DHX36Q9H2U1 1008 aaKnown RBP17.17■□□□□ 0.34
TOP3B-215ENST00000470338 DOCK1Q14185 1865 aa17.16■□□□□ 0.34
TOP3B-215ENST00000470338 TCRBV5S4A2TA0A5A2 114 aa17.16■□□□□ 0.34
TOP3B-215ENST00000470338 IGF2BP3O00425 579 aaKnown RBP eCLIP17.16■□□□□ 0.34
TOP3B-215ENST00000470338 SLURP2P0DP57 97 aa17.16■□□□□ 0.34
TOP3B-215ENST00000470338 GTF2A2P52657 109 aa17.16■□□□□ 0.34
TOP3B-215ENST00000470338 PPATQ06203 517 aa17.16■□□□□ 0.34
TOP3B-215ENST00000470338 PPIL2Q13356 520 aa17.16■□□□□ 0.34
TOP3B-215ENST00000470338 TNS4Q8IZW8 715 aa17.16■□□□□ 0.34
TOP3B-215ENST00000470338 PTPN18Q99952 460 aa17.16■□□□□ 0.34
TOP3B-215ENST00000470338 RIOK1Q9BRS2 568 aaKnown RBP17.16■□□□□ 0.34
TOP3B-215ENST00000470338 PHIPQ8WWQ0 1821 aa17.16■□□□□ 0.34
TOP3B-215ENST00000470338 ATAD5Q96QE3 1844 aa17.16■□□□□ 0.34
TOP3B-215ENST00000470338 FLT1P17948 1338 aa17.16■□□□□ 0.34
TOP3B-215ENST00000470338 IRF6O14896 467 aa17.15■□□□□ 0.34
TOP3B-215ENST00000470338 TBC1D8O95759 1140 aa17.15■□□□□ 0.34
TOP3B-215ENST00000470338 NOM1Q5C9Z4 860 aaKnown RBP17.15■□□□□ 0.34
TOP3B-215ENST00000470338 MAPKAPK5Q8IW41 473 aa17.15■□□□□ 0.34
TOP3B-215ENST00000470338 EXOC6Q8TAG9 804 aa17.15■□□□□ 0.34
TOP3B-215ENST00000470338 GCC1Q96CN9 775 aa17.15■□□□□ 0.34
TOP3B-215ENST00000470338 GPATCH3Q96I76 525 aa17.15■□□□□ 0.34
TOP3B-215ENST00000470338 PI4KBQ9UBF8 816 aa17.15■□□□□ 0.34
TOP3B-215ENST00000470338 ZNF532Q9HCE3 1301 aa17.15■□□□□ 0.34
TOP3B-215ENST00000470338 CTNND1O60716 968 aaKnown RBP17.14■□□□□ 0.33
TOP3B-215ENST00000470338 ADD2P35612 726 aa17.14■□□□□ 0.33
TOP3B-215ENST00000470338 OTUD7BQ6GQQ9 843 aa17.14■□□□□ 0.33
TOP3B-215ENST00000470338 METTL16Q86W50 562 aaKnown RBP17.14■□□□□ 0.33
TOP3B-215ENST00000470338 SCYL3Q8IZE3 742 aa17.14■□□□□ 0.33
TOP3B-215ENST00000470338 BRI3BPQ8WY22 251 aa17.14■□□□□ 0.33
TOP3B-215ENST00000470338 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.14■□□□□ 0.33
TOP3B-215ENST00000470338 HERC5Q9UII4 1024 aaKnown RBP17.14■□□□□ 0.33
TOP3B-215ENST00000470338 PTPRFP10586 1907 aa17.13■□□□□ 0.33
TOP3B-215ENST00000470338 CCL15-CCL14A0A0B4J2E2 113 aa17.13■□□□□ 0.33
TOP3B-215ENST00000470338 MAGEB6P1A0A0J9YX57 407 aa17.13■□□□□ 0.33
TOP3B-215ENST00000470338 SNAPC2Q13487 334 aa17.13■□□□□ 0.33
TOP3B-215ENST00000470338 CCL15Q16663 113 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms