RNA–Protein interactions for RNA: ENST00000470271.5

CTPS1-206, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-206ENST00000470271 CYP7A1P22680 504 aa24.21■■□□□ 1.47
CTPS1-206ENST00000470271 PPP4CP60510 307 aa24.21■■□□□ 1.47
CTPS1-206ENST00000470271 VGLL4Q14135 290 aa24.21■■□□□ 1.47
CTPS1-206ENST00000470271 TMED8Q6PL24 325 aaPredicted RBP24.21■■□□□ 1.47
CTPS1-206ENST00000470271 TEX11Q8IYF3 940 aa24.21■■□□□ 1.47
CTPS1-206ENST00000470271 MAGEB6Q8N7X4 407 aa24.21■■□□□ 1.47
CTPS1-206ENST00000470271 WRNIP1Q96S55 665 aa24.21■■□□□ 1.47
CTPS1-206ENST00000470271 BOLA2Q9H3K6 86 aa24.21■■□□□ 1.47
CTPS1-206ENST00000470271 ELP3Q9H9T3 547 aa24.21■■□□□ 1.47
CTPS1-206ENST00000470271 DOCK2Q92608 1830 aa24.21■■□□□ 1.47
CTPS1-206ENST00000470271 SH3RF3Q8TEJ3 882 aaPredicted RBP24.2■■□□□ 1.46
CTPS1-206ENST00000470271 PRDM10Q9NQV6 1147 aa24.2■■□□□ 1.46
CTPS1-206ENST00000470271 TSKSQ9UJT2 592 aa24.2■■□□□ 1.46
CTPS1-206ENST00000470271 GOLIM4O00461 696 aa24.19■■□□□ 1.46
CTPS1-206ENST00000470271 SREBF2Q12772 1141 aa24.19■■□□□ 1.46
CTPS1-206ENST00000470271 COL13A1Q5TAT6 717 aaPredicted RBP24.19■■□□□ 1.46
CTPS1-206ENST00000470271 SH3BP5LQ7L8J4 393 aa24.19■■□□□ 1.46
CTPS1-206ENST00000470271 SAGE1Q9NXZ1 904 aa24.19■■□□□ 1.46
CTPS1-206ENST00000470271 DDTLA6NHG4 134 aaPredicted RBP24.18■■□□□ 1.46
CTPS1-206ENST00000470271 TM4SF4P48230 202 aa24.18■■□□□ 1.46
CTPS1-206ENST00000470271 OPTNQ96CV9 577 aa24.18■■□□□ 1.46
CTPS1-206ENST00000470271 HAUS7Q99871 368 aa24.18■■□□□ 1.46
CTPS1-206ENST00000470271 RNF186Q9NXI6 227 aa24.18■■□□□ 1.46
CTPS1-206ENST00000470271 MANSC4A6NHS7 340 aaPredicted RBP24.17■■□□□ 1.46
CTPS1-206ENST00000470271 GJA5P36382 358 aa24.17■■□□□ 1.46
CTPS1-206ENST00000470271 HDAC1Q13547 482 aaPredicted RBP24.17■■□□□ 1.46
CTPS1-206ENST00000470271 ZKSCAN4Q969J2 545 aaPredicted RBP24.17■■□□□ 1.46
CTPS1-206ENST00000470271 GPATCH3Q96I76 525 aa24.17■■□□□ 1.46
CTPS1-206ENST00000470271 OSBPL5Q9H0X9 879 aaPredicted RBP24.17■■□□□ 1.46
CTPS1-206ENST00000470271 ECHDC1Q9NTX5 307 aa24.17■■□□□ 1.46
CTPS1-206ENST00000470271 PAG1Q9NWQ8 432 aa24.17■■□□□ 1.46
CTPS1-206ENST00000470271 ATRNL1Q5VV63 1379 aa24.16■■□□□ 1.46
CTPS1-206ENST00000470271 TRPA1O75762 1119 aa24.16■■□□□ 1.46
CTPS1-206ENST00000470271 CERS3Q8IU89 383 aa24.16■■□□□ 1.46
CTPS1-206ENST00000470271 EXOC6Q8TAG9 804 aa24.16■■□□□ 1.46
CTPS1-206ENST00000470271 EDC3Q96F86 508 aaKnown RBP24.16■■□□□ 1.46
CTPS1-206ENST00000470271 ZNF112Q9UJU3 913 aa24.16■■□□□ 1.46
CTPS1-206ENST00000470271 SNCAIPQ9Y6H5 919 aa24.16■■□□□ 1.46
CTPS1-206ENST00000470271 COL2A1P02458 1487 aaPredicted RBP24.15■■□□□ 1.46
CTPS1-206ENST00000470271 INHBEP58166 350 aa24.15■■□□□ 1.46
CTPS1-206ENST00000470271 DYNLL1P63167 89 aaKnown RBP24.15■■□□□ 1.46
CTPS1-206ENST00000470271 SLC9C2Q5TAH2 1124 aa24.15■■□□□ 1.46
CTPS1-206ENST00000470271 MIGA1Q8NAN2 632 aa24.15■■□□□ 1.46
CTPS1-206ENST00000470271 TGFBRAP1Q8WUH2 860 aa24.15■■□□□ 1.46
CTPS1-206ENST00000470271 CNKSR2Q8WXI2 1034 aa24.15■■□□□ 1.46
CTPS1-206ENST00000470271 SPDYE5A6NIY4 337 aa24.14■■□□□ 1.45
CTPS1-206ENST00000470271 PDE6AP16499 860 aa24.14■■□□□ 1.45
CTPS1-206ENST00000470271 INPP5BP32019 993 aa24.14■■□□□ 1.45
CTPS1-206ENST00000470271 MAP3K10Q02779 954 aa24.14■■□□□ 1.45
CTPS1-206ENST00000470271 GCC1Q96CN9 775 aa24.14■■□□□ 1.45
CTPS1-206ENST00000470271 ERO1BQ86YB8 467 aa24.13■■□□□ 1.45
CTPS1-206ENST00000470271 OTUD5Q96G74 571 aa24.13■■□□□ 1.45
CTPS1-206ENST00000470271 ZBTB47Q9UFB7 747 aaPredicted RBP24.13■■□□□ 1.45
CTPS1-206ENST00000470271 CDK5RAP2Q96SN8 1893 aa24.13■■□□□ 1.45
CTPS1-206ENST00000470271 FLT1P17948 1338 aa24.12■■□□□ 1.45
CTPS1-206ENST00000470271 LAMB1P07942 1786 aa24.12■■□□□ 1.45
CTPS1-206ENST00000470271 MAPKAPK5Q8IW41 473 aa24.12■■□□□ 1.45
CTPS1-206ENST00000470271 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.12■■□□□ 1.453e-14■■■■■ 44.3
CTPS1-206ENST00000470271 ZNF532Q9HCE3 1301 aa24.11■■□□□ 1.45
CTPS1-206ENST00000470271 PHF20L1A8MW92 1017 aa24.11■■□□□ 1.45
CTPS1-206ENST00000470271 TBC1D12O60347 775 aa24.11■■□□□ 1.45
CTPS1-206ENST00000470271 NOL9Q5SY16 702 aaKnown RBP24.11■■□□□ 1.45
CTPS1-206ENST00000470271 TSHZ3Q63HK5 1081 aa24.11■■□□□ 1.45
CTPS1-206ENST00000470271 DHX36Q9H2U1 1008 aaKnown RBP24.11■■□□□ 1.45
CTPS1-206ENST00000470271 FOCADQ5VW36 1801 aa24.11■■□□□ 1.45
CTPS1-206ENST00000470271 MAGEB6P1A0A0J9YX57 407 aa24.1■■□□□ 1.45
CTPS1-206ENST00000470271 TCRBV5S4A2TA0A5A2 114 aa24.1■■□□□ 1.45
CTPS1-206ENST00000470271 SLURP2P0DP57 97 aa24.1■■□□□ 1.45
CTPS1-206ENST00000470271 ANKRD45Q5TZF3 282 aa24.1■■□□□ 1.45
CTPS1-206ENST00000470271 IFNL1Q8IU54 200 aa24.1■■□□□ 1.45
CTPS1-206ENST00000470271 RWDD1Q9H446 243 aaPredicted RBP24.1■■□□□ 1.45
CTPS1-206ENST00000470271 TTC41PQ6P2S7 1318 aa24.1■■□□□ 1.45
CTPS1-206ENST00000470271 TESPA1A2RU30 521 aaPredicted RBP24.09■■□□□ 1.45
CTPS1-206ENST00000470271 ALDH1A1P00352 501 aa24.09■■□□□ 1.45
CTPS1-206ENST00000470271 USP5P45974 858 aa24.09■■□□□ 1.45
CTPS1-206ENST00000470271 GTF2A2P52657 109 aa24.09■■□□□ 1.45
CTPS1-206ENST00000470271 PPATQ06203 517 aa24.09■■□□□ 1.45
CTPS1-206ENST00000470271 PPIL2Q13356 520 aa24.09■■□□□ 1.45
CTPS1-206ENST00000470271 MS4A4AQ96JQ5 239 aa24.09■■□□□ 1.45
CTPS1-206ENST00000470271 RIOK1Q9BRS2 568 aaKnown RBP24.09■■□□□ 1.45
CTPS1-206ENST00000470271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.09■■□□□ 1.45
CTPS1-206ENST00000470271 PI4KBQ9UBF8 816 aa24.09■■□□□ 1.45
CTPS1-206ENST00000470271 ADD2P35612 726 aa24.08■■□□□ 1.45
CTPS1-206ENST00000470271 SCYL3Q8IZE3 742 aa24.08■■□□□ 1.45
CTPS1-206ENST00000470271 OTUD7AQ8TE49 926 aaPredicted RBP24.08■■□□□ 1.45
CTPS1-206ENST00000470271 CASP8AP2Q9UKL3 1982 aa24.08■■□□□ 1.45
CTPS1-206ENST00000470271 FAM196BA6NMK8 535 aa24.07■■□□□ 1.44
CTPS1-206ENST00000470271 IGF2BP3O00425 579 aaKnown RBP eCLIP24.07■■□□□ 1.44
CTPS1-206ENST00000470271 IRF6O14896 467 aa24.07■■□□□ 1.44
CTPS1-206ENST00000470271 OTUD7BQ6GQQ9 843 aa24.07■■□□□ 1.44
CTPS1-206ENST00000470271 HERC5Q9UII4 1024 aaKnown RBP24.07■■□□□ 1.44
CTPS1-206ENST00000470271 PALD1Q9ULE6 856 aa24.07■■□□□ 1.44
CTPS1-206ENST00000470271 MYH7P12883 1935 aa24.06■■□□□ 1.44
CTPS1-206ENST00000470271 CCL15-CCL14A0A0B4J2E2 113 aa24.06■■□□□ 1.44
CTPS1-206ENST00000470271 ERC2O15083 957 aa24.06■■□□□ 1.44
CTPS1-206ENST00000470271 CTNND1O60716 968 aaKnown RBP24.06■■□□□ 1.44
CTPS1-206ENST00000470271 TBC1D8O95759 1140 aa24.06■■□□□ 1.44
CTPS1-206ENST00000470271 CCL15Q16663 113 aa24.06■■□□□ 1.44
CTPS1-206ENST00000470271 ZSCAN25Q6NSZ9 544 aa24.06■■□□□ 1.44
CTPS1-206ENST00000470271 TNS4Q8IZW8 715 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms