RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 CSF1RP07333 972 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 FDX1P10109 184 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 HCLS1P14317 486 aaPredicted RBP9.35□□□□□ -0.91
SMC4-212ENST00000470240 SLC19A1P41440 591 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 CTSWP56202 376 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 DIXDC1Q155Q3 683 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 ZRSR1Q15695 479 aaKnown RBP9.35□□□□□ -0.91
SMC4-212ENST00000470240 GIMAP6Q6P9H5 292 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 LDHAL6AQ6ZMR3 332 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 TTC6Q86TZ1 520 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 FAM160A2Q8N612 972 aaPredicted RBP9.35□□□□□ -0.91
SMC4-212ENST00000470240 RGS22Q8NE09 1264 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 SMARCC2Q8TAQ2 1214 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 FAM200AQ8TCP9 573 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 LEO1Q8WVC0 666 aaPredicted RBP9.35□□□□□ -0.91
SMC4-212ENST00000470240 PIGBQ92521 554 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 ZNF512BQ96KM6 892 aaPredicted RBP9.35□□□□□ -0.91
SMC4-212ENST00000470240 SEC62Q99442 399 aaKnown RBP9.35□□□□□ -0.91
SMC4-212ENST00000470240 BTG4Q9NY30 223 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 TRMT112Q9UI30 125 aaKnown RBP9.35□□□□□ -0.91
SMC4-212ENST00000470240 NDUFB9Q9Y6M9 179 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 WNK3Q9BYP7 1800 aa9.35□□□□□ -0.91
SMC4-212ENST00000470240 MROH5Q6ZUA9 1318 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 BCL9O00512 1426 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 ZNF213O14771 459 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 ADCY5O95622 1261 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 SLC5A1P13866 664 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 ITGA6P23229 1130 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 TYRO3Q06418 890 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 APOBRQ0VD83 1088 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 SCRN1Q12765 414 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 RESTQ13127 1097 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 NLRP10Q86W26 655 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 FBXL16Q8N461 479 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 NSUN7Q8NE18 718 aaKnown RBP9.34□□□□□ -0.91
SMC4-212ENST00000470240 DDX11Q96FC9 970 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 FAM89AQ96GI7 184 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 AGXT2Q9BYV1 514 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 PUS3Q9BZE2 481 aaKnown RBP9.34□□□□□ -0.91
SMC4-212ENST00000470240 CLSTN2Q9H4D0 955 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 USP25Q9UHP3 1055 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 ASAP1Q9ULH1 1129 aa9.34□□□□□ -0.91
SMC4-212ENST00000470240 FCF1Q9Y324 198 aaKnown RBP9.34□□□□□ -0.91
SMC4-212ENST00000470240 DISP2A7MBM2 1401 aa9.33□□□□□ -0.92
SMC4-212ENST00000470240 ATRNO75882 1429 aa9.33□□□□□ -0.92
SMC4-212ENST00000470240 C6orf229H3BNL8 230 aa9.33□□□□□ -0.92
SMC4-212ENST00000470240 M0R2C6 588 aa9.33□□□□□ -0.92
SMC4-212ENST00000470240 IRS4O14654 1257 aaPredicted RBP9.33□□□□□ -0.92
SMC4-212ENST00000470240 JAK2O60674 1132 aa9.33□□□□□ -0.92
SMC4-212ENST00000470240 IL6STP40189 918 aaPredicted RBP9.33□□□□□ -0.92
SMC4-212ENST00000470240 EXOSC10Q01780 885 aaKnown RBP9.33□□□□□ -0.92
SMC4-212ENST00000470240 PUM3Q15397 648 aaKnown RBP9.33□□□□□ -0.92
SMC4-212ENST00000470240 DNTTIP2Q5QJE6 756 aaKnown RBP9.33□□□□□ -0.92
SMC4-212ENST00000470240 STOX1Q6ZVD7 989 aa9.33□□□□□ -0.92
SMC4-212ENST00000470240 DZIP3Q86Y13 1208 aaKnown RBP9.33□□□□□ -0.92
SMC4-212ENST00000470240 SYTL4Q96C24 671 aaPredicted RBP9.33□□□□□ -0.92
SMC4-212ENST00000470240 DACT1Q9NYF0 836 aa9.33□□□□□ -0.92
SMC4-212ENST00000470240 COL22A1Q8NFW1 1626 aaPredicted RBP9.33□□□□□ -0.92
SMC4-212ENST00000470240 RIC1Q4ADV7 1423 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 MOXD2PA6NHM9 499 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 GOLGA8BA8MQT2 603 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 GOLGA6L19H0YKK7 550 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 GPAA1O43292 621 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 PRC1O43663 620 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 KINO60870 393 aaKnown RBP9.32□□□□□ -0.92
SMC4-212ENST00000470240 APPP05067 770 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 NDUFV2P19404 249 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 GPTP24298 496 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 CCT2P78371 535 aaKnown RBP9.32□□□□□ -0.92
SMC4-212ENST00000470240 CHAF1AQ13111 956 aaPredicted RBP9.32□□□□□ -0.92
SMC4-212ENST00000470240 UBE3CQ15386 1083 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 SF3A1Q15459 793 aaKnown RBP9.32□□□□□ -0.92
SMC4-212ENST00000470240 PARP10Q53GL7 1025 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 BRAPQ7Z569 592 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 OSBP2Q969R2 916 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 MPHOSPH8Q99549 860 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 FUCA2Q9BTY2 467 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 LRRC2Q9BYS8 371 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 NAT10Q9H0A0 1025 aaKnown RBP9.32□□□□□ -0.92
SMC4-212ENST00000470240 TFIP11Q9UBB9 837 aaKnown RBP9.32□□□□□ -0.92
SMC4-212ENST00000470240 ZNF652Q9Y2D9 606 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 THRAP3Q9Y2W1 955 aaKnown RBP9.32□□□□□ -0.92
SMC4-212ENST00000470240 NUP98P52948 1817 aa9.32□□□□□ -0.92
SMC4-212ENST00000470240 AHDC1Q5TGY3 1603 aaPredicted RBP9.31□□□□□ -0.92
SMC4-212ENST00000470240 DOT1LQ8TEK3 1739 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 ARAP2Q8WZ64 1704 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 KLF18A0A0U1RQI7 1052 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 PDE8BO95263 885 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 CYP19A1P11511 503 aaPredicted RBP9.31□□□□□ -0.92
SMC4-212ENST00000470240 GNAT2P19087 354 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 PDIA3P30101 505 aaKnown RBP9.31□□□□□ -0.92
SMC4-212ENST00000470240 ADORA1P30542 326 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 ADD2P35612 726 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 IGHMBP2P38935 993 aaKnown RBP9.31□□□□□ -0.92
SMC4-212ENST00000470240 ZAP70P43403 619 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 EVCP57679 992 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 MAP3K12Q12852 859 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 GNL2Q13823 731 aaKnown RBP9.31□□□□□ -0.92
SMC4-212ENST00000470240 TRIM29Q14134 588 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 STX1AQ16623 288 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms