RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 DNAJC2Q99543 621 aaKnown RBP11.83□□□□□ -0.52
SRRT-208ENST00000469602 HAUS7Q99871 368 aa11.83□□□□□ -0.52
SRRT-208ENST00000469602 BOLA2Q9H3K6 86 aa11.83□□□□□ -0.52
SRRT-208ENST00000469602 DDX4Q9NQI0 724 aaKnown RBP11.83□□□□□ -0.52
SRRT-208ENST00000469602 ECHDC1Q9NTX5 307 aa11.83□□□□□ -0.52
SRRT-208ENST00000469602 AATFQ9NY61 560 aaKnown RBP eCLIP11.83□□□□□ -0.52
SRRT-208ENST00000469602 COL2A1P02458 1487 aaPredicted RBP11.83□□□□□ -0.52
SRRT-208ENST00000469602 ZBTB48P10074 688 aaPredicted RBP11.82□□□□□ -0.52
SRRT-208ENST00000469602 CTCFP49711 727 aaPredicted RBP11.82□□□□□ -0.52
SRRT-208ENST00000469602 MKRN3Q13064 507 aaKnown RBP11.82□□□□□ -0.52
SRRT-208ENST00000469602 VGLL4Q14135 290 aa11.82□□□□□ -0.52
SRRT-208ENST00000469602 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.82□□□□□ -0.52
SRRT-208ENST00000469602 MIGA2Q7L4E1 593 aa11.82□□□□□ -0.52
SRRT-208ENST00000469602 SH3BP5LQ7L8J4 393 aa11.82□□□□□ -0.52
SRRT-208ENST00000469602 ZSCAN29Q8IWY8 852 aaPredicted RBP11.82□□□□□ -0.52
SRRT-208ENST00000469602 GCC1Q96CN9 775 aa11.82□□□□□ -0.52
SRRT-208ENST00000469602 WRNIP1Q96S55 665 aa11.82□□□□□ -0.52
SRRT-208ENST00000469602 ZNF341Q9BYN7 854 aa11.82□□□□□ -0.52
SRRT-208ENST00000469602 PAG1Q9NWQ8 432 aa11.82□□□□□ -0.52
SRRT-208ENST00000469602 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
SRRT-208ENST00000469602 CSADQ9Y600 493 aa11.82□□□□□ -0.52
SRRT-208ENST00000469602 MYH1P12882 1939 aa11.82□□□□□ -0.52
SRRT-208ENST00000469602 ATRNL1Q5VV63 1379 aa11.81□□□□□ -0.52
SRRT-208ENST00000469602 DDTLA6NHG4 134 aaPredicted RBP11.81□□□□□ -0.52
SRRT-208ENST00000469602 PDE6AP16499 860 aa11.81□□□□□ -0.52
SRRT-208ENST00000469602 SLC9C2Q5TAH2 1124 aa11.81□□□□□ -0.52
SRRT-208ENST00000469602 CERS3Q8IU89 383 aa11.81□□□□□ -0.52
SRRT-208ENST00000469602 EDC3Q96F86 508 aaKnown RBP11.81□□□□□ -0.52
SRRT-208ENST00000469602 WNK4Q96J92 1243 aa11.81□□□□□ -0.52
SRRT-208ENST00000469602 OSBPL5Q9H0X9 879 aaPredicted RBP11.81□□□□□ -0.52
SRRT-208ENST00000469602 ELP3Q9H9T3 547 aa11.81□□□□□ -0.52
SRRT-208ENST00000469602 HSPA8P11142 646 aaKnown RBP11.8□□□□□ -0.52
SRRT-208ENST00000469602 TM4SF4P48230 202 aa11.8□□□□□ -0.52
SRRT-208ENST00000469602 LBX1P52954 281 aa11.8□□□□□ -0.52
SRRT-208ENST00000469602 SREBF2Q12772 1141 aa11.8□□□□□ -0.52
SRRT-208ENST00000469602 ANKRD45Q5TZF3 282 aa11.8□□□□□ -0.52
SRRT-208ENST00000469602 TSHZ3Q63HK5 1081 aa11.8□□□□□ -0.52
SRRT-208ENST00000469602 MIGA1Q8NAN2 632 aa11.8□□□□□ -0.52
SRRT-208ENST00000469602 ZKSCAN4Q969J2 545 aaPredicted RBP11.8□□□□□ -0.52
SRRT-208ENST00000469602 OPTNQ96CV9 577 aa11.8□□□□□ -0.52
SRRT-208ENST00000469602 RWDD1Q9H446 243 aaPredicted RBP11.8□□□□□ -0.52
SRRT-208ENST00000469602 SAGE1Q9NXZ1 904 aa11.8□□□□□ -0.52
SRRT-208ENST00000469602 ZBTB47Q9UFB7 747 aaPredicted RBP11.8□□□□□ -0.52
SRRT-208ENST00000469602 ZNF112Q9UJU3 913 aa11.8□□□□□ -0.52
SRRT-208ENST00000469602 SNCAIPQ9Y6H5 919 aa11.8□□□□□ -0.52
SRRT-208ENST00000469602 SIPA1L1O43166 1804 aa11.8□□□□□ -0.52
SRRT-208ENST00000469602 DOCK1Q14185 1865 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 TCRBV5S4A2TA0A5A2 114 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 MANSC4A6NHS7 340 aaPredicted RBP11.79□□□□□ -0.52
SRRT-208ENST00000469602 SPDYE5A6NIY4 337 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 INPP5BP32019 993 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 GJA5P36382 358 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 DYNLL1P63167 89 aaKnown RBP11.79□□□□□ -0.52
SRRT-208ENST00000469602 MAP3K10Q02779 954 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 MAPKAPK5Q8IW41 473 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 TGFBRAP1Q8WUH2 860 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 CNKSR2Q8WXI2 1034 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.79□□□□□ -0.521e-7■■□□□ 12.1
SRRT-208ENST00000469602 PRDM10Q9NQV6 1147 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 RNF186Q9NXI6 227 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 TSKSQ9UJT2 592 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 CASP8AP2Q9UKL3 1982 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 FLT1P17948 1338 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 TTC41PQ6P2S7 1318 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 ZNF532Q9HCE3 1301 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 ATAD5Q96QE3 1844 aa11.79□□□□□ -0.52
SRRT-208ENST00000469602 NAV1Q8NEY1 1877 aa11.78□□□□□ -0.52
SRRT-208ENST00000469602 MAGEB6P1A0A0J9YX57 407 aa11.78□□□□□ -0.52
SRRT-208ENST00000469602 PHF20L1A8MW92 1017 aa11.78□□□□□ -0.52
SRRT-208ENST00000469602 ERC2O15083 957 aa11.78□□□□□ -0.52
SRRT-208ENST00000469602 TRPA1O75762 1119 aa11.78□□□□□ -0.52
SRRT-208ENST00000469602 MX1P20591 662 aa11.78□□□□□ -0.52
SRRT-208ENST00000469602 ADD2P35612 726 aa11.78□□□□□ -0.52
SRRT-208ENST00000469602 INHBEP58166 350 aa11.78□□□□□ -0.52
SRRT-208ENST00000469602 IRX6P78412 446 aaPredicted RBP11.78□□□□□ -0.52
SRRT-208ENST00000469602 ERO1BQ86YB8 467 aa11.78□□□□□ -0.52
SRRT-208ENST00000469602 SMC5Q8IY18 1101 aa11.78□□□□□ -0.52
SRRT-208ENST00000469602 OTUD7AQ8TE49 926 aaPredicted RBP11.78□□□□□ -0.52
SRRT-208ENST00000469602 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
SRRT-208ENST00000469602 RIOK1Q9BRS2 568 aaKnown RBP11.78□□□□□ -0.52
SRRT-208ENST00000469602 DHX36Q9H2U1 1008 aaKnown RBP11.78□□□□□ -0.52
SRRT-208ENST00000469602 DDX60LQ5H9U9 1706 aaKnown RBP11.77□□□□□ -0.52
SRRT-208ENST00000469602 TBC1D12O60347 775 aa11.77□□□□□ -0.53
SRRT-208ENST00000469602 IGHDP01880 384 aa11.77□□□□□ -0.53
SRRT-208ENST00000469602 NOL9Q5SY16 702 aaKnown RBP11.77□□□□□ -0.53
SRRT-208ENST00000469602 COL13A1Q5TAT6 717 aaPredicted RBP11.77□□□□□ -0.53
SRRT-208ENST00000469602 ZSCAN25Q6NSZ9 544 aa11.77□□□□□ -0.53
SRRT-208ENST00000469602 PI4K2BQ8TCG2 481 aa11.77□□□□□ -0.53
SRRT-208ENST00000469602 PI4KBQ9UBF8 816 aa11.77□□□□□ -0.53
SRRT-208ENST00000469602 SALL3Q9BXA9 1300 aa11.77□□□□□ -0.53
SRRT-208ENST00000469602 PHIPQ8WWQ0 1821 aa11.76□□□□□ -0.53
SRRT-208ENST00000469602 IRF6O14896 467 aa11.76□□□□□ -0.53
SRRT-208ENST00000469602 CTNND1O60716 968 aaKnown RBP11.76□□□□□ -0.53
SRRT-208ENST00000469602 GLRX3O76003 335 aaKnown RBP11.76□□□□□ -0.53
SRRT-208ENST00000469602 SLURP2P0DP57 97 aa11.76□□□□□ -0.53
SRRT-208ENST00000469602 USP5P45974 858 aa11.76□□□□□ -0.53
SRRT-208ENST00000469602 PPATQ06203 517 aa11.76□□□□□ -0.53
SRRT-208ENST00000469602 PPIL2Q13356 520 aa11.76□□□□□ -0.53
SRRT-208ENST00000469602 UBE3CQ15386 1083 aa11.76□□□□□ -0.53
SRRT-208ENST00000469602 SLFNL1Q499Z3 407 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms