RNA–Protein interactions for RNA: ENST00000469275.5

PRKD3-207, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-207ENST00000469275 THSD7AQ9UPZ6 1657 aa6.98□□□□□ -1.29
PRKD3-207ENST00000469275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.97□□□□□ -1.29
PRKD3-207ENST00000469275 DHX16O60231 1041 aaKnown RBP6.97□□□□□ -1.29
PRKD3-207ENST00000469275 NMT2O60551 498 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 PPARAQ07869 468 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 STK38Q15208 465 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 TRAPPC3LQ5T215 181 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 FSIP1Q8NA03 581 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 NACAP1Q9BZK3 213 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 GNL3LQ9NVN8 582 aaKnown RBP6.97□□□□□ -1.29
PRKD3-207ENST00000469275 PCDHA7Q9UN72 937 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 KCNJ14Q9UNX9 436 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 CICQ96RK0 1608 aaPredicted RBP6.97□□□□□ -1.29
PRKD3-207ENST00000469275 CNTNAP4Q9C0A0 1308 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 LRP5O75197 1615 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 TRIM37O94972 964 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 LETM1O95202 739 aaPredicted RBP6.97□□□□□ -1.29
PRKD3-207ENST00000469275 CYP2D6P10635 497 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 IARSP41252 1262 aaKnown RBP6.97□□□□□ -1.29
PRKD3-207ENST00000469275 MECOMQ03112 1051 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 SPECC1Q5M775 1068 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 FAM217BQ9NTX9 383 aaPredicted RBP6.97□□□□□ -1.29
PRKD3-207ENST00000469275 BAZ2AQ9UIF9 1905 aaKnown RBP6.97□□□□□ -1.29
PRKD3-207ENST00000469275 BTAF1O14981 1849 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 ATRNO75882 1429 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 ZNF831Q5JPB2 1677 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 USP17L12C9JPN9 530 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 USP17L21D6R901 530 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 BIN1O00499 593 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 HIBADHP31937 336 aaKnown RBP6.97□□□□□ -1.29
PRKD3-207ENST00000469275 EVCP57679 992 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 UBE4AQ14139 1066 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 WTAPQ15007 396 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 GRIK5Q16478 980 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 FAM47AQ5JRC9 791 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 MYSM1Q5VVJ2 828 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 KRT40Q6A162 431 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 SASS6Q6UVJ0 657 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 SYNE3Q6ZMZ3 975 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 ZNF396Q96N95 335 aaPredicted RBP6.97□□□□□ -1.29
PRKD3-207ENST00000469275 CLSTN2Q9H4D0 955 aa6.97□□□□□ -1.29
PRKD3-207ENST00000469275 COL5A3P25940 1745 aaPredicted RBP6.96□□□□□ -1.29
PRKD3-207ENST00000469275 ZMYM6O95789 1325 aa6.96□□□□□ -1.29
PRKD3-207ENST00000469275 ERICH2A1L162 156 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 NDUFA8P51970 172 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 KIF23Q02241 960 aaPredicted RBP6.96□□□□□ -1.3
PRKD3-207ENST00000469275 DIXDC1Q155Q3 683 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 CCDC73Q6ZRK6 1079 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 CNBD1Q8NA66 436 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 RIOK1Q9BRS2 568 aaKnown RBP6.96□□□□□ -1.3
PRKD3-207ENST00000469275 UBAC1Q9BSL1 405 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 NYXQ9GZU5 481 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 CBX8Q9HC52 389 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 RCOR1Q9UKL0 485 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.96□□□□□ -1.3
PRKD3-207ENST00000469275 ZNF804BA4D1E1 1349 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 TNKSO95271 1327 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 BTBD18B2RXH4 712 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 KINO60870 393 aaKnown RBP6.96□□□□□ -1.3
PRKD3-207ENST00000469275 HMGB2P26583 209 aaKnown RBP6.96□□□□□ -1.3
PRKD3-207ENST00000469275 TM4SF1P30408 202 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 SNW1Q13573 536 aaKnown RBP6.96□□□□□ -1.3
PRKD3-207ENST00000469275 NTRK3Q16288 839 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 C11orf57Q6ZUT1 292 aaPredicted RBP6.96□□□□□ -1.3
PRKD3-207ENST00000469275 NSUN4Q96CB9 384 aaKnown RBP6.96□□□□□ -1.3
PRKD3-207ENST00000469275 TMEM87BQ96K49 555 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 CLIC6Q96NY7 704 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 SDF4Q9BRK5 362 aa6.96□□□□□ -1.3
PRKD3-207ENST00000469275 DDX19AQ9NUU7 478 aaKnown RBP6.96□□□□□ -1.3
PRKD3-207ENST00000469275 SPTLC2O15270 562 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 PDIA4P13667 645 aaKnown RBP6.95□□□□□ -1.3
PRKD3-207ENST00000469275 ZNF165P49910 485 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 NR5A1Q13285 461 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 RTN1Q16799 776 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 CPLX2Q6PUV4 134 aaKnown RBP6.95□□□□□ -1.3
PRKD3-207ENST00000469275 OLFM4Q6UX06 510 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 TICAM2Q86XR7 235 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 LINC00301Q8NCQ3 95 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 FAM200AQ8TCP9 573 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 KRT23Q9C075 422 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 QTRT2Q9H974 415 aaKnown RBP6.95□□□□□ -1.3
PRKD3-207ENST00000469275 NOL7Q9UMY1 257 aaKnown RBP6.95□□□□□ -1.3
PRKD3-207ENST00000469275 ZKSCAN5Q9Y2L8 839 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 RTL9Q8NET4 1388 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 MYH2Q9UKX2 1941 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 MYH13Q9UKX3 1938 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 WDHD1O75717 1129 aaPredicted RBP6.95□□□□□ -1.3
PRKD3-207ENST00000469275 USP17L8P0C7I0 530 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 SSRP1Q08945 709 aaKnown RBP6.95□□□□□ -1.3
PRKD3-207ENST00000469275 SART3Q15020 963 aaKnown RBP6.95□□□□□ -1.3
PRKD3-207ENST00000469275 DZIP1Q86YF9 867 aaKnown RBP6.95□□□□□ -1.3
PRKD3-207ENST00000469275 DRC7Q8IY82 874 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 ZNF654Q8IZM8 581 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 FBXL16Q8N461 479 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 STAG1Q8WVM7 1258 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 CCDC39Q9UFE4 941 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 PNPLA7Q6ZV29 1317 aa6.95□□□□□ -1.3
PRKD3-207ENST00000469275 BCORQ6W2J9 1755 aa6.94□□□□□ -1.3
PRKD3-207ENST00000469275 FAM205CA6NFA0 338 aa6.94□□□□□ -1.3
PRKD3-207ENST00000469275 PLEKHA8P1O95397 391 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms