RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 IDI2Q9BXS1 227 aa15.23■□□□□ 0.03
HDAC3-204ENST00000469207 GABRQQ9UN88 632 aa15.23■□□□□ 0.03
HDAC3-204ENST00000469207 GAKO14976 1311 aa15.22■□□□□ 0.03
HDAC3-204ENST00000469207 MYH2Q9UKX2 1941 aa15.22■□□□□ 0.03
HDAC3-204ENST00000469207 FAM196BA6NMK8 535 aa15.22■□□□□ 0.03
HDAC3-204ENST00000469207 CXCL11O14625 94 aa15.22■□□□□ 0.03
HDAC3-204ENST00000469207 SEMA3EO15041 775 aa15.22■□□□□ 0.03
HDAC3-204ENST00000469207 SRGAP3O43295 1099 aa15.22■□□□□ 0.03
HDAC3-204ENST00000469207 ENTPD3O75355 529 aa15.22■□□□□ 0.03
HDAC3-204ENST00000469207 PTPRAP18433 802 aa15.22■□□□□ 0.03
HDAC3-204ENST00000469207 DZIP1Q86YF9 867 aaKnown RBP15.22■□□□□ 0.03
HDAC3-204ENST00000469207 SCYL3Q8IZE3 742 aa15.22■□□□□ 0.03
HDAC3-204ENST00000469207 COLQQ9Y215 455 aaPredicted RBP15.22■□□□□ 0.03
HDAC3-204ENST00000469207 AFG3L2Q9Y4W6 797 aa15.22■□□□□ 0.03
HDAC3-204ENST00000469207 GNRH1P01148 92 aa15.21■□□□□ 0.03
HDAC3-204ENST00000469207 BCRP11274 1271 aa15.21■□□□□ 0.03
HDAC3-204ENST00000469207 MAP3K10Q02779 954 aa15.21■□□□□ 0.03
HDAC3-204ENST00000469207 MECOMQ03112 1051 aa15.21■□□□□ 0.03
HDAC3-204ENST00000469207 PRKCZQ05513 592 aa15.21■□□□□ 0.03
HDAC3-204ENST00000469207 GADL1Q6ZQY3 521 aa15.21■□□□□ 0.03
HDAC3-204ENST00000469207 RAET1EQ8TD07 263 aa15.21■□□□□ 0.03
HDAC3-204ENST00000469207 SHISA4Q96DD7 197 aa15.21■□□□□ 0.03
HDAC3-204ENST00000469207 MYPNQ86TC9 1320 aa15.2■□□□□ 0.02
HDAC3-204ENST00000469207 A0A0G2JLL6 359 aaPredicted RBP15.2■□□□□ 0.02
HDAC3-204ENST00000469207 H0YGN5 161 aa15.2■□□□□ 0.02
HDAC3-204ENST00000469207 CT47B1P0C2W7 299 aaPredicted RBP15.2■□□□□ 0.02
HDAC3-204ENST00000469207 GRK4P32298 578 aa15.2■□□□□ 0.02
HDAC3-204ENST00000469207 PRMT2P55345 433 aa15.2■□□□□ 0.02
HDAC3-204ENST00000469207 RHBDL3P58872 404 aa15.2■□□□□ 0.02
HDAC3-204ENST00000469207 PRRT2Q7Z6L0 340 aaPredicted RBP15.2■□□□□ 0.02
HDAC3-204ENST00000469207 FAM163AQ96GL9 167 aaPredicted RBP15.2■□□□□ 0.02
HDAC3-204ENST00000469207 PICK1Q9NRD5 415 aa15.2■□□□□ 0.02
HDAC3-204ENST00000469207 HMG20BQ9P0W2 317 aa15.2■□□□□ 0.02
HDAC3-204ENST00000469207 PNMA6EA0A0J9YXQ4 647 aa15.19■□□□□ 0.02
HDAC3-204ENST00000469207 TRIM75PA6NK02 468 aa15.19■□□□□ 0.02
HDAC3-204ENST00000469207 BCAR3O75815 825 aa15.19■□□□□ 0.02
HDAC3-204ENST00000469207 HOXD10P28358 340 aa15.19■□□□□ 0.02
HDAC3-204ENST00000469207 RRP1BQ14684 758 aaKnown RBP15.19■□□□□ 0.02
HDAC3-204ENST00000469207 ERICH6Q7L0X2 663 aa15.19■□□□□ 0.02
HDAC3-204ENST00000469207 ZGPATQ8N5A5 531 aaKnown RBP15.19■□□□□ 0.02
HDAC3-204ENST00000469207 CLUAP1Q96AJ1 413 aa15.19■□□□□ 0.02
HDAC3-204ENST00000469207 PARK7Q99497 189 aaKnown RBP15.19■□□□□ 0.02
HDAC3-204ENST00000469207 BIN2Q9UBW5 565 aaPredicted RBP15.19■□□□□ 0.02
HDAC3-204ENST00000469207 RFX7Q2KHR2 1363 aa15.19■□□□□ 0.02
HDAC3-204ENST00000469207 MROH7-TTC4A0A0A0MT08 1334 aa15.18■□□□□ 0.02
HDAC3-204ENST00000469207 GPR75-ASB3A0A0A6YYF3 556 aa15.18■□□□□ 0.02
HDAC3-204ENST00000469207 GNAI3P08754 354 aa15.18■□□□□ 0.02
HDAC3-204ENST00000469207 CCL5P13501 91 aa15.18■□□□□ 0.02
HDAC3-204ENST00000469207 FXR1P51114 621 aaKnown RBP eCLIP15.18■□□□□ 0.02
HDAC3-204ENST00000469207 FASTKD5Q7L8L6 764 aaKnown RBP15.18■□□□□ 0.02
HDAC3-204ENST00000469207 FRAT1Q92837 279 aaPredicted RBP15.18■□□□□ 0.02
HDAC3-204ENST00000469207 RNF208Q9H0X6 261 aa15.18■□□□□ 0.02
HDAC3-204ENST00000469207 HDAC5Q9UQL6 1122 aa15.18■□□□□ 0.02
HDAC3-204ENST00000469207 AKAP2Q9Y2D5 859 aa15.18■□□□□ 0.02
HDAC3-204ENST00000469207 CTNND1O60716 968 aaKnown RBP15.17■□□□□ 0.02
HDAC3-204ENST00000469207 TRIM27P14373 513 aa15.17■□□□□ 0.02
HDAC3-204ENST00000469207 FCGRTP55899 365 aa15.17■□□□□ 0.02
HDAC3-204ENST00000469207 MTX1Q13505 466 aa15.17■□□□□ 0.02
HDAC3-204ENST00000469207 MVPQ14764 893 aaKnown RBP15.17■□□□□ 0.02
HDAC3-204ENST00000469207 TREML2Q5T2D2 321 aa15.17■□□□□ 0.02
HDAC3-204ENST00000469207 SPTY2D1Q68D10 685 aaPredicted RBP15.17■□□□□ 0.02
HDAC3-204ENST00000469207 SPATA5Q8NB90 893 aa15.17■□□□□ 0.02
HDAC3-204ENST00000469207 ARHGAP45Q92619 1136 aa15.17■□□□□ 0.02
HDAC3-204ENST00000469207 DPF3Q92784 378 aa15.17■□□□□ 0.02
HDAC3-204ENST00000469207 NSUN4Q96CB9 384 aaKnown RBP15.17■□□□□ 0.02
HDAC3-204ENST00000469207 UNC93B1Q9H1C4 597 aa15.17■□□□□ 0.02
HDAC3-204ENST00000469207 ZBTB22O15209 634 aa15.16■□□□□ 0.02
HDAC3-204ENST00000469207 ELNP15502 786 aa15.16■□□□□ 0.02
HDAC3-204ENST00000469207 MCAMP43121 646 aa15.16■□□□□ 0.02
HDAC3-204ENST00000469207 FLT3LGP49771 235 aa15.16■□□□□ 0.02
HDAC3-204ENST00000469207 GORABQ5T7V8 394 aa15.16■□□□□ 0.02
HDAC3-204ENST00000469207 SLF2Q8IX21 1173 aa15.16■□□□□ 0.02
HDAC3-204ENST00000469207 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.16■□□□□ 0.02
HDAC3-204ENST00000469207 SNRKQ9NRH2 765 aa15.16■□□□□ 0.02
HDAC3-204ENST00000469207 RAI14Q9P0K7 980 aa15.16■□□□□ 0.02
HDAC3-204ENST00000469207 PDS5AQ29RF7 1337 aaKnown RBP15.16■□□□□ 0.02
HDAC3-204ENST00000469207 GJA8P48165 433 aa15.15■□□□□ 0.02
HDAC3-204ENST00000469207 ANKRD13CQ8N6S4 541 aa15.15■□□□□ 0.02
HDAC3-204ENST00000469207 DOCK2Q92608 1830 aa15.15■□□□□ 0.02
HDAC3-204ENST00000469207 ADCY3O60266 1144 aa15.14■□□□□ 0.01
HDAC3-204ENST00000469207 GNAI2P04899 355 aa15.14■□□□□ 0.01
HDAC3-204ENST00000469207 GJB1P08034 283 aa15.14■□□□□ 0.01
HDAC3-204ENST00000469207 SPP2Q13103 211 aa15.14■□□□□ 0.01
HDAC3-204ENST00000469207 G3BP1Q13283 466 aaKnown RBP eCLIP15.14■□□□□ 0.01
HDAC3-204ENST00000469207 CHRDL2Q6WN34 429 aa15.14■□□□□ 0.01
HDAC3-204ENST00000469207 UBE2Q1Q7Z7E8 422 aa15.14■□□□□ 0.01
HDAC3-204ENST00000469207 SH3RF3Q8TEJ3 882 aaPredicted RBP15.14■□□□□ 0.01
HDAC3-204ENST00000469207 SMCR8Q8TEV9 937 aaPredicted RBP15.14■□□□□ 0.01
HDAC3-204ENST00000469207 TAOK2Q9UL54 1235 aa15.14■□□□□ 0.01
HDAC3-204ENST00000469207 PHIPQ8WWQ0 1821 aa15.14■□□□□ 0.01
HDAC3-204ENST00000469207 TNPO2O14787 897 aaKnown RBP15.13■□□□□ 0.01
HDAC3-204ENST00000469207 MGAMO43451 1857 aa15.13■□□□□ 0.01
HDAC3-204ENST00000469207 TBC1D12O60347 775 aa15.13■□□□□ 0.01
HDAC3-204ENST00000469207 PEX10O60683 326 aa15.13■□□□□ 0.01
HDAC3-204ENST00000469207 ARID4AP29374 1257 aaPredicted RBP15.13■□□□□ 0.01
HDAC3-204ENST00000469207 UBXN2AP68543 259 aa15.13■□□□□ 0.01
HDAC3-204ENST00000469207 JAG1P78504 1218 aa15.13■□□□□ 0.01
HDAC3-204ENST00000469207 ATF7IPQ6VMQ6 1270 aa15.13■□□□□ 0.01
HDAC3-204ENST00000469207 TMEM57Q8N5G2 664 aa15.13■□□□□ 0.01
HDAC3-204ENST00000469207 U2AF1L4Q8WU68 220 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms