RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 MROH7-TTC4A0A0A0MT08 1334 aa13.07□□□□□ -0.32
TGFBR3-205ENST00000468996 RPAP1Q9BWH6 1393 aaPredicted RBP13.07□□□□□ -0.32
TGFBR3-205ENST00000468996 DDTLA6NHG4 134 aaPredicted RBP13.06□□□□□ -0.32
TGFBR3-205ENST00000468996 SLURP2P0DP57 97 aa13.06□□□□□ -0.32
TGFBR3-205ENST00000468996 SH3BP5LQ7L8J4 393 aa13.06□□□□□ -0.32
TGFBR3-205ENST00000468996 ZNF384Q8TF68 577 aa13.06□□□□□ -0.32
TGFBR3-205ENST00000468996 NSUN4Q96CB9 384 aaKnown RBP13.06□□□□□ -0.32
TGFBR3-205ENST00000468996 NOL10Q9BSC4 688 aaKnown RBP13.06□□□□□ -0.32
TGFBR3-205ENST00000468996 CCDC8Q9H0W5 538 aaPredicted RBP13.06□□□□□ -0.32
TGFBR3-205ENST00000468996 BCL11AQ9H165 835 aa13.06□□□□□ -0.32
TGFBR3-205ENST00000468996 GPR108Q9NPR9 543 aa13.06□□□□□ -0.32
TGFBR3-205ENST00000468996 DDX4Q9NQI0 724 aaKnown RBP13.06□□□□□ -0.32
TGFBR3-205ENST00000468996 PICK1Q9NRD5 415 aa13.06□□□□□ -0.32
TGFBR3-205ENST00000468996 ZHX2Q9Y6X8 837 aa13.06□□□□□ -0.32
TGFBR3-205ENST00000468996 ARHGEF6Q15052 776 aa13.05□□□□□ -0.32
TGFBR3-205ENST00000468996 PTPN22Q9Y2R2 807 aa13.05□□□□□ -0.32
TGFBR3-205ENST00000468996 NOP58Q9Y2X3 529 aaKnown RBP13.05□□□□□ -0.32
TGFBR3-205ENST00000468996 AK9Q5TCS8 1911 aa13.05□□□□□ -0.32
TGFBR3-205ENST00000468996 MYH13Q9UKX3 1938 aa13.05□□□□□ -0.32
TGFBR3-205ENST00000468996 PHF20L1A8MW92 1017 aa13.04□□□□□ -0.32
TGFBR3-205ENST00000468996 PDHXO00330 501 aa13.04□□□□□ -0.32
TGFBR3-205ENST00000468996 TLR2O60603 784 aa13.04□□□□□ -0.32
TGFBR3-205ENST00000468996 MS4A1P11836 297 aa13.04□□□□□ -0.32
TGFBR3-205ENST00000468996 RHBDL3P58872 404 aa13.04□□□□□ -0.32
TGFBR3-205ENST00000468996 NAA16Q6N069 864 aaPredicted RBP13.04□□□□□ -0.32
TGFBR3-205ENST00000468996 CEP85Q6P2H3 762 aa13.04□□□□□ -0.32
TGFBR3-205ENST00000468996 EXOC6BQ9Y2D4 811 aa13.04□□□□□ -0.32
TGFBR3-205ENST00000468996 BAG3O95817 575 aa13.03□□□□□ -0.32
TGFBR3-205ENST00000468996 ZAP70P43403 619 aa13.03□□□□□ -0.32
TGFBR3-205ENST00000468996 CAP1Q01518 475 aa13.03□□□□□ -0.32
TGFBR3-205ENST00000468996 KIF22Q14807 665 aa13.03□□□□□ -0.32
TGFBR3-205ENST00000468996 NOL9Q5SY16 702 aaKnown RBP13.03□□□□□ -0.32
TGFBR3-205ENST00000468996 TEX11Q8IYF3 940 aa13.03□□□□□ -0.32
TGFBR3-205ENST00000468996 SCYL3Q8IZE3 742 aa13.03□□□□□ -0.32
TGFBR3-205ENST00000468996 SH3RF3Q8TEJ3 882 aaPredicted RBP13.03□□□□□ -0.32
TGFBR3-205ENST00000468996 EAF2Q96CJ1 260 aaPredicted RBP13.03□□□□□ -0.32
TGFBR3-205ENST00000468996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.03□□□□□ -0.321e-7■■■■■ 29.1
TGFBR3-205ENST00000468996 AATFQ9NY61 560 aaKnown RBP eCLIP13.03□□□□□ -0.32
TGFBR3-205ENST00000468996 TLR7Q9NYK1 1049 aaKnown RBP13.03□□□□□ -0.32
TGFBR3-205ENST00000468996 CPA4Q9UI42 421 aa13.03□□□□□ -0.32
TGFBR3-205ENST00000468996 OTOFQ9HC10 1997 aa13.03□□□□□ -0.32
TGFBR3-205ENST00000468996 MYH2Q9UKX2 1941 aa13.02□□□□□ -0.32
TGFBR3-205ENST00000468996 FAM196BA6NMK8 535 aa13.02□□□□□ -0.33
TGFBR3-205ENST00000468996 APBB1O00213 710 aa13.02□□□□□ -0.33
TGFBR3-205ENST00000468996 CXCL11O14625 94 aa13.02□□□□□ -0.33
TGFBR3-205ENST00000468996 CTNND1O60716 968 aaKnown RBP13.02□□□□□ -0.33
TGFBR3-205ENST00000468996 MAP4K4O95819 1239 aaPredicted RBP13.02□□□□□ -0.33
TGFBR3-205ENST00000468996 CYP2E1P05181 493 aaPredicted RBP13.02□□□□□ -0.33
TGFBR3-205ENST00000468996 PTPRAP18433 802 aa13.02□□□□□ -0.33
TGFBR3-205ENST00000468996 MAP3K10Q02779 954 aa13.02□□□□□ -0.33
TGFBR3-205ENST00000468996 ANKRD23Q86SG2 305 aa13.02□□□□□ -0.33
TGFBR3-205ENST00000468996 ZCCHC17Q9NP64 241 aaKnown RBP13.02□□□□□ -0.33
TGFBR3-205ENST00000468996 DBNLQ9UJU6 430 aaKnown RBP13.02□□□□□ -0.33
TGFBR3-205ENST00000468996 KCNH4Q9UQ05 1017 aa13.02□□□□□ -0.33
TGFBR3-205ENST00000468996 COG6Q9Y2V7 657 aa13.02□□□□□ -0.33
TGFBR3-205ENST00000468996 MYCP01106 439 aaPredicted RBP13.01□□□□□ -0.33
TGFBR3-205ENST00000468996 GADL1Q6ZQY3 521 aa13.01□□□□□ -0.33
TGFBR3-205ENST00000468996 FASTKD5Q7L8L6 764 aaKnown RBP13.01□□□□□ -0.33
TGFBR3-205ENST00000468996 CCDC84Q86UT8 332 aaPredicted RBP13.01□□□□□ -0.33
TGFBR3-205ENST00000468996 AACSQ86V21 672 aa13.01□□□□□ -0.33
TGFBR3-205ENST00000468996 ERC1Q8IUD2 1116 aa13.01□□□□□ -0.33
TGFBR3-205ENST00000468996 ZNF512BQ96KM6 892 aaPredicted RBP13.01□□□□□ -0.33
TGFBR3-205ENST00000468996 ARHGAP39Q9C0H5 1083 aa13.01□□□□□ -0.33
TGFBR3-205ENST00000468996 IL1RAPL2Q9NP60 686 aa13.01□□□□□ -0.33
TGFBR3-205ENST00000468996 PIH1D3Q9NQM4 214 aaKnown RBP13.01□□□□□ -0.33
TGFBR3-205ENST00000468996 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.01□□□□□ -0.33
TGFBR3-205ENST00000468996 RCAN3Q9UKA8 241 aa13.01□□□□□ -0.33
TGFBR3-205ENST00000468996 ATRNL1Q5VV63 1379 aa13□□□□□ -0.33
TGFBR3-205ENST00000468996 TRIM75PA6NK02 468 aa13□□□□□ -0.33
TGFBR3-205ENST00000468996 TBC1D12O60347 775 aa13□□□□□ -0.33
TGFBR3-205ENST00000468996 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
TGFBR3-205ENST00000468996 IDH1O75874 414 aaKnown RBP13□□□□□ -0.33
TGFBR3-205ENST00000468996 CYP2C8P10632 490 aa13□□□□□ -0.33
TGFBR3-205ENST00000468996 PLCG2P16885 1265 aa13□□□□□ -0.33
TGFBR3-205ENST00000468996 CYP7A1P22680 504 aa13□□□□□ -0.33
TGFBR3-205ENST00000468996 LACTBP83111 547 aaPredicted RBP13□□□□□ -0.33
TGFBR3-205ENST00000468996 MOGSQ13724 837 aa13□□□□□ -0.33
TGFBR3-205ENST00000468996 GPAT2Q6NUI2 795 aa13□□□□□ -0.33
TGFBR3-205ENST00000468996 C17orf99Q6UX52 265 aa13□□□□□ -0.33
TGFBR3-205ENST00000468996 MAPKAPK5Q8IW41 473 aa13□□□□□ -0.33
TGFBR3-205ENST00000468996 TGFBRAP1Q8WUH2 860 aa13□□□□□ -0.33
TGFBR3-205ENST00000468996 OSBPL5Q9H0X9 879 aaPredicted RBP13□□□□□ -0.33
TGFBR3-205ENST00000468996 AFG3L2Q9Y4W6 797 aa13□□□□□ -0.33
TGFBR3-205ENST00000468996 PTCH2Q9Y6C5 1203 aa13□□□□□ -0.33
TGFBR3-205ENST00000468996 NDUFB9Q9Y6M9 179 aa13□□□□□ -0.33
TGFBR3-205ENST00000468996 RFX7Q2KHR2 1363 aa12.99□□□□□ -0.33
TGFBR3-205ENST00000468996 FMNL1O95466 1100 aaPredicted RBP12.99□□□□□ -0.33
TGFBR3-205ENST00000468996 PSMC4P43686 418 aa12.99□□□□□ -0.33
TGFBR3-205ENST00000468996 PPP4CP60510 307 aa12.99□□□□□ -0.33
TGFBR3-205ENST00000468996 SLC9C1Q4G0N8 1177 aa12.99□□□□□ -0.33
TGFBR3-205ENST00000468996 HSP90AB4PQ58FF6 505 aa12.99□□□□□ -0.33
TGFBR3-205ENST00000468996 ADGRA1Q86SQ6 560 aa12.99□□□□□ -0.33
TGFBR3-205ENST00000468996 NBPF11Q86T75 865 aa12.99□□□□□ -0.33
TGFBR3-205ENST00000468996 PI4KBQ9UBF8 816 aa12.99□□□□□ -0.33
TGFBR3-205ENST00000468996 DDX19BQ9UMR2 479 aa12.99□□□□□ -0.33
TGFBR3-205ENST00000468996 A0A0G2JLL6 359 aaPredicted RBP12.98□□□□□ -0.33
TGFBR3-205ENST00000468996 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
TGFBR3-205ENST00000468996 HMMRO75330 724 aa12.98□□□□□ -0.33
TGFBR3-205ENST00000468996 DYNLL1P63167 89 aaKnown RBP12.98□□□□□ -0.33
TGFBR3-205ENST00000468996 SPP2Q13103 211 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms