RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 ADGRA1Q86SQ6 560 aa15.39■□□□□ 0.05
ABCF1-204ENST00000468958 ERC1Q8IUD2 1116 aa15.39■□□□□ 0.05
ABCF1-204ENST00000468958 REM2Q8IYK8 340 aaPredicted RBP15.39■□□□□ 0.05
ABCF1-204ENST00000468958 RHPN1Q8TCX5 695 aa15.39■□□□□ 0.05
ABCF1-204ENST00000468958 PTPN18Q99952 460 aa15.39■□□□□ 0.05
ABCF1-204ENST00000468958 IDI2Q9BXS1 227 aa15.39■□□□□ 0.05
ABCF1-204ENST00000468958 PIH1D3Q9NQM4 214 aaKnown RBP15.39■□□□□ 0.05
ABCF1-204ENST00000468958 DDTLA6NHG4 134 aaPredicted RBP15.38■□□□□ 0.05
ABCF1-204ENST00000468958 INPP5BP32019 993 aa15.38■□□□□ 0.05
ABCF1-204ENST00000468958 SPTY2D1Q68D10 685 aaPredicted RBP15.38■□□□□ 0.05
ABCF1-204ENST00000468958 IFNL1Q8IU54 200 aa15.38■□□□□ 0.05
ABCF1-204ENST00000468958 MS4A4AQ96JQ5 239 aa15.38■□□□□ 0.05
ABCF1-204ENST00000468958 ZNF512BQ96KM6 892 aaPredicted RBP15.38■□□□□ 0.05
ABCF1-204ENST00000468958 WRNIP1Q96S55 665 aa15.38■□□□□ 0.05
ABCF1-204ENST00000468958 DDX60LQ5H9U9 1706 aaKnown RBP15.37■□□□□ 0.05
ABCF1-204ENST00000468958 MANSC4A6NHS7 340 aaPredicted RBP15.37■□□□□ 0.05
ABCF1-204ENST00000468958 APBB1O00213 710 aa15.37■□□□□ 0.05
ABCF1-204ENST00000468958 SREBF2Q12772 1141 aa15.37■□□□□ 0.05
ABCF1-204ENST00000468958 CCDC158Q5M9N0 1113 aa15.37■□□□□ 0.05
ABCF1-204ENST00000468958 ABHD8Q96I13 439 aa15.37■□□□□ 0.05
ABCF1-204ENST00000468958 MCOLN1Q9GZU1 580 aa15.37■□□□□ 0.05
ABCF1-204ENST00000468958 ANTXR1Q9H6X2 564 aa15.37■□□□□ 0.05
ABCF1-204ENST00000468958 RAI14Q9P0K7 980 aa15.37■□□□□ 0.05
ABCF1-204ENST00000468958 ZNF112Q9UJU3 913 aa15.37■□□□□ 0.05
ABCF1-204ENST00000468958 TESPA1A2RU30 521 aaPredicted RBP15.36■□□□□ 0.05
ABCF1-204ENST00000468958 SPDYE5A6NIY4 337 aa15.36■□□□□ 0.05
ABCF1-204ENST00000468958 PICALMQ13492 652 aa15.36■□□□□ 0.05
ABCF1-204ENST00000468958 AACSQ86V21 672 aa15.36■□□□□ 0.05
ABCF1-204ENST00000468958 ZNF296Q8WUU4 475 aaPredicted RBP15.36■□□□□ 0.05
ABCF1-204ENST00000468958 OTUD5Q96G74 571 aa15.36■□□□□ 0.05
ABCF1-204ENST00000468958 CRBNQ96SW2 442 aa15.36■□□□□ 0.05
ABCF1-204ENST00000468958 CFHR5Q9BXR6 569 aa15.36■□□□□ 0.05
ABCF1-204ENST00000468958 ENTPD3O75355 529 aa15.35■□□□□ 0.05
ABCF1-204ENST00000468958 DGKZQ13574 1117 aa15.35■□□□□ 0.05
ABCF1-204ENST00000468958 BRI3BPQ8WY22 251 aa15.35■□□□□ 0.05
ABCF1-204ENST00000468958 ZNF341Q9BYN7 854 aa15.35■□□□□ 0.05
ABCF1-204ENST00000468958 LRP2BPQ9P2M1 347 aa15.35■□□□□ 0.05
ABCF1-204ENST00000468958 NAV1Q8NEY1 1877 aa15.35■□□□□ 0.05
ABCF1-204ENST00000468958 PHF20L1A8MW92 1017 aa15.34■□□□□ 0.05
ABCF1-204ENST00000468958 GPR25O00155 361 aa15.34■□□□□ 0.05
ABCF1-204ENST00000468958 CAP1Q01518 475 aa15.34■□□□□ 0.05
ABCF1-204ENST00000468958 DCAF15Q66K64 600 aa15.34■□□□□ 0.05
ABCF1-204ENST00000468958 SLF2Q8IX21 1173 aa15.34■□□□□ 0.05
ABCF1-204ENST00000468958 SH3RF3Q8TEJ3 882 aaPredicted RBP15.34■□□□□ 0.05
ABCF1-204ENST00000468958 AATFQ9NY61 560 aaKnown RBP eCLIP15.34■□□□□ 0.05
ABCF1-204ENST00000468958 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.34■□□□□ 0.05
ABCF1-204ENST00000468958 CSADQ9Y600 493 aa15.34■□□□□ 0.05
ABCF1-204ENST00000468958 FAM196BA6NMK8 535 aa15.33■□□□□ 0.04
ABCF1-204ENST00000468958 IRF6O14896 467 aa15.33■□□□□ 0.04
ABCF1-204ENST00000468958 RAB11FIP3O75154 756 aa15.33■□□□□ 0.04
ABCF1-204ENST00000468958 MAP3K10Q02779 954 aa15.33■□□□□ 0.04
ABCF1-204ENST00000468958 NAA16Q6N069 864 aaPredicted RBP15.33■□□□□ 0.04
ABCF1-204ENST00000468958 KIF1BPQ96EK5 621 aa15.33■□□□□ 0.04
ABCF1-204ENST00000468958 COL2A1P02458 1487 aaPredicted RBP15.33■□□□□ 0.04
ABCF1-204ENST00000468958 CCL15-CCL14A0A0B4J2E2 113 aa15.32■□□□□ 0.04
ABCF1-204ENST00000468958 NEFLP07196 543 aa15.32■□□□□ 0.04
ABCF1-204ENST00000468958 LDHCP07864 332 aa15.32■□□□□ 0.04
ABCF1-204ENST00000468958 INHBEP58166 350 aa15.32■□□□□ 0.04
ABCF1-204ENST00000468958 DYNLL1P63167 89 aaKnown RBP15.32■□□□□ 0.04
ABCF1-204ENST00000468958 GSTO1P78417 241 aa15.32■□□□□ 0.04
ABCF1-204ENST00000468958 CRHR2Q13324 411 aa15.32■□□□□ 0.04
ABCF1-204ENST00000468958 CCL15Q16663 113 aa15.32■□□□□ 0.04
ABCF1-204ENST00000468958 ERO1BQ86YB8 467 aa15.32■□□□□ 0.04
ABCF1-204ENST00000468958 FAM43AQ8N2R8 423 aa15.32■□□□□ 0.04
ABCF1-204ENST00000468958 BCL11AQ9H165 835 aa15.32■□□□□ 0.04
ABCF1-204ENST00000468958 LOC285556D6RIA3 1793 aa15.31■□□□□ 0.04
ABCF1-204ENST00000468958 SMARCA5O60264 1052 aaPredicted RBP15.31■□□□□ 0.04
ABCF1-204ENST00000468958 PPIL2Q13356 520 aa15.31■□□□□ 0.04
ABCF1-204ENST00000468958 MOGSQ13724 837 aa15.31■□□□□ 0.04
ABCF1-204ENST00000468958 RRP1BQ14684 758 aaKnown RBP15.31■□□□□ 0.04
ABCF1-204ENST00000468958 NOM1Q5C9Z4 860 aaKnown RBP15.31■□□□□ 0.04
ABCF1-204ENST00000468958 NOL9Q5SY16 702 aaKnown RBP15.31■□□□□ 0.04
ABCF1-204ENST00000468958 TEX11Q8IYF3 940 aa15.31■□□□□ 0.04
ABCF1-204ENST00000468958 HOOK2Q96ED9 719 aa15.31■□□□□ 0.04
ABCF1-204ENST00000468958 EDC3Q96F86 508 aaKnown RBP15.31■□□□□ 0.04
ABCF1-204ENST00000468958 OSBPL5Q9H0X9 879 aaPredicted RBP15.31■□□□□ 0.04
ABCF1-204ENST00000468958 MGAMO43451 1857 aa15.31■□□□□ 0.04
ABCF1-204ENST00000468958 PPP4CP60510 307 aa15.3■□□□□ 0.04
ABCF1-204ENST00000468958 CCDC84Q86UT8 332 aaPredicted RBP15.3■□□□□ 0.04
ABCF1-204ENST00000468958 ZSCAN29Q8IWY8 852 aaPredicted RBP15.3■□□□□ 0.04
ABCF1-204ENST00000468958 CLASRPQ8N2M8 674 aaKnown RBP15.3■□□□□ 0.04
ABCF1-204ENST00000468958 ZBTB47Q9UFB7 747 aaPredicted RBP15.3■□□□□ 0.04
ABCF1-204ENST00000468958 BAZ2AQ9UIF9 1905 aaKnown RBP15.3■□□□□ 0.04
ABCF1-204ENST00000468958 PCDHB15Q9Y5E8 787 aa15.3■□□□□ 0.04
ABCF1-204ENST00000468958 BTBD19C9JJ37 291 aa15.29■□□□□ 0.04
ABCF1-204ENST00000468958 IDH1O75874 414 aaKnown RBP15.29■□□□□ 0.04
ABCF1-204ENST00000468958 ALDH1A1P00352 501 aa15.29■□□□□ 0.04
ABCF1-204ENST00000468958 CHGBP05060 677 aa15.29■□□□□ 0.04
ABCF1-204ENST00000468958 CYP7A1P22680 504 aa15.29■□□□□ 0.04
ABCF1-204ENST00000468958 GTF2A2P52657 109 aa15.29■□□□□ 0.04
ABCF1-204ENST00000468958 PPATQ06203 517 aa15.29■□□□□ 0.04
ABCF1-204ENST00000468958 CTU1Q7Z7A3 348 aaKnown RBP15.29■□□□□ 0.04
ABCF1-204ENST00000468958 MAGEB6Q8N7X4 407 aa15.29■□□□□ 0.04
ABCF1-204ENST00000468958 MIGA1Q8NAN2 632 aa15.29■□□□□ 0.04
ABCF1-204ENST00000468958 FLT1P17948 1338 aa15.28■□□□□ 0.04
ABCF1-204ENST00000468958 MYH8P13535 1937 aa15.28■□□□□ 0.04
ABCF1-204ENST00000468958 FKTNO75072 461 aa15.28■□□□□ 0.04
ABCF1-204ENST00000468958 SLFNL1Q499Z3 407 aa15.28■□□□□ 0.04
ABCF1-204ENST00000468958 MAPKAPK5Q8IW41 473 aa15.28■□□□□ 0.04
ABCF1-204ENST00000468958 TGFBRAP1Q8WUH2 860 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms