RNA–Protein interactions for RNA: ENST00000468347.1

SHQ1-204, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-204ENST00000468347 TMEM63CQ9P1W3 806 aa4.43□□□□□ -1.7
SHQ1-204ENST00000468347 SYNGAP1Q96PV0 1343 aa4.43□□□□□ -1.7
SHQ1-204ENST00000468347 PRICKLE3O43900 615 aaPredicted RBP4.42□□□□□ -1.7
SHQ1-204ENST00000468347 PI3P19957 117 aa4.42□□□□□ -1.7
SHQ1-204ENST00000468347 TMEM132EQ6IEE7 984 aa4.42□□□□□ -1.7
SHQ1-204ENST00000468347 ZNF605Q86T29 641 aa4.42□□□□□ -1.7
SHQ1-204ENST00000468347 IRF2BP1Q8IU81 584 aa4.42□□□□□ -1.7
SHQ1-204ENST00000468347 TOP6BLQ8N6T0 577 aa4.42□□□□□ -1.7
SHQ1-204ENST00000468347 ALPK1Q96QP1 1244 aa4.42□□□□□ -1.7
SHQ1-204ENST00000468347 WDR18Q9BV38 432 aa4.42□□□□□ -1.7
SHQ1-204ENST00000468347 SGPP1Q9BX95 441 aa4.42□□□□□ -1.7
SHQ1-204ENST00000468347 ELP3Q9H9T3 547 aa4.42□□□□□ -1.7
SHQ1-204ENST00000468347 PIDD1Q9HB75 910 aa4.42□□□□□ -1.7
SHQ1-204ENST00000468347 LUC7LQ9NQ29 371 aaKnown RBP4.42□□□□□ -1.7
SHQ1-204ENST00000468347 C1QTNF3-AMACRE9PGA6 284 aa4.41□□□□□ -1.7
SHQ1-204ENST00000468347 ECEL1O95672 775 aa4.41□□□□□ -1.7
SHQ1-204ENST00000468347 WEE1P30291 646 aa4.41□□□□□ -1.7
SHQ1-204ENST00000468347 ACVRL1P37023 503 aa4.41□□□□□ -1.7
SHQ1-204ENST00000468347 ERVFC1P60507 584 aa4.41□□□□□ -1.7
SHQ1-204ENST00000468347 FAM26DQ5JW98 314 aa4.41□□□□□ -1.7
SHQ1-204ENST00000468347 OSMRQ99650 979 aa4.41□□□□□ -1.7
SHQ1-204ENST00000468347 ATP13A1Q9HD20 1204 aa4.41□□□□□ -1.7
SHQ1-204ENST00000468347 GTF2IRD1Q9UHL9 959 aa4.41□□□□□ -1.7
SHQ1-204ENST00000468347 TMPRSS2O15393 492 aa4.4□□□□□ -1.71
SHQ1-204ENST00000468347 CES1P23141 567 aa4.4□□□□□ -1.71
SHQ1-204ENST00000468347 BRD2P25440 801 aaKnown RBP4.4□□□□□ -1.71
SHQ1-204ENST00000468347 PDE12Q6L8Q7 609 aaKnown RBP4.4□□□□□ -1.71
SHQ1-204ENST00000468347 TTC6Q86TZ1 520 aa4.4□□□□□ -1.71
SHQ1-204ENST00000468347 ASAP3Q8TDY4 903 aa4.4□□□□□ -1.71
SHQ1-204ENST00000468347 ZKSCAN3Q9BRR0 538 aa4.4□□□□□ -1.71
SHQ1-204ENST00000468347 TNFRSF18Q9Y5U5 241 aa4.4□□□□□ -1.71
SHQ1-204ENST00000468347 CILPO75339 1184 aa4.39□□□□□ -1.71
SHQ1-204ENST00000468347 TACR2P21452 398 aa4.39□□□□□ -1.71
SHQ1-204ENST00000468347 VMACQ2NL98 169 aa4.39□□□□□ -1.71
SHQ1-204ENST00000468347 RNF32Q9H0A6 362 aa4.39□□□□□ -1.71
SHQ1-204ENST00000468347 ATXN3LQ9H3M9 355 aa4.39□□□□□ -1.71
SHQ1-204ENST00000468347 HPXP02790 462 aa4.38□□□□□ -1.71
SHQ1-204ENST00000468347 XKR5Q6UX68 686 aa4.38□□□□□ -1.71
SHQ1-204ENST00000468347 Q8N1X5 172 aa4.38□□□□□ -1.71
SHQ1-204ENST00000468347 C1orf127Q8N9H9 656 aa4.38□□□□□ -1.71
SHQ1-204ENST00000468347 SIGLEC10Q96LC7 697 aa4.38□□□□□ -1.71
SHQ1-204ENST00000468347 FANCD2OSQ96PS1 177 aa4.38□□□□□ -1.71
SHQ1-204ENST00000468347 CORO1BQ9BR76 489 aa4.38□□□□□ -1.71
SHQ1-204ENST00000468347 BHLHE41Q9C0J9 482 aaPredicted RBP4.38□□□□□ -1.71
SHQ1-204ENST00000468347 PCSK5Q92824 1860 aa4.37□□□□□ -1.71
SHQ1-204ENST00000468347 ATP9BO43861 1147 aa4.37□□□□□ -1.71
SHQ1-204ENST00000468347 KRTAP10-9P60411 292 aa4.37□□□□□ -1.71
SHQ1-204ENST00000468347 ZNF575Q86XF7 245 aa4.37□□□□□ -1.71
SHQ1-204ENST00000468347 GPR152Q8TDT2 470 aa4.37□□□□□ -1.71
SHQ1-204ENST00000468347 SLC6A17Q9H1V8 727 aa4.37□□□□□ -1.71
SHQ1-204ENST00000468347 ZNF552Q9H707 407 aaPredicted RBP4.37□□□□□ -1.71
SHQ1-204ENST00000468347 SLAMF8Q9P0V8 285 aa4.37□□□□□ -1.71
SHQ1-204ENST00000468347 PCOLCE2Q9UKZ9 415 aa4.37□□□□□ -1.71
SHQ1-204ENST00000468347 IRAK3Q9Y616 596 aa4.37□□□□□ -1.71
SHQ1-204ENST00000468347 GNAT3A8MTJ3 354 aa4.36□□□□□ -1.71
SHQ1-204ENST00000468347 ZAP70P43403 619 aa4.36□□□□□ -1.71
SHQ1-204ENST00000468347 ZFYVE27Q5T4F4 411 aa4.36□□□□□ -1.71
SHQ1-204ENST00000468347 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
SHQ1-204ENST00000468347 ZNF438Q7Z4V0 828 aa4.36□□□□□ -1.71
SHQ1-204ENST00000468347 TRIM56Q9BRZ2 755 aaKnown RBP4.36□□□□□ -1.71
SHQ1-204ENST00000468347 RNGTTO60942 597 aaKnown RBP4.35□□□□□ -1.71
SHQ1-204ENST00000468347 PCDH1Q08174 1060 aa4.35□□□□□ -1.71
SHQ1-204ENST00000468347 DPYDQ12882 1025 aa4.35□□□□□ -1.71
SHQ1-204ENST00000468347 PDE3AQ14432 1141 aa4.35□□□□□ -1.71
SHQ1-204ENST00000468347 ZNF423Q2M1K9 1284 aa4.35□□□□□ -1.71
SHQ1-204ENST00000468347 HSPA12BQ96MM6 686 aa4.35□□□□□ -1.71
SHQ1-204ENST00000468347 DISC1Q9NRI5 854 aa4.35□□□□□ -1.71
SHQ1-204ENST00000468347 DNAJC25-GNG10A0A024R161 153 aa4.34□□□□□ -1.71
SHQ1-204ENST00000468347 ATXN1P54253 815 aaKnown RBP4.34□□□□□ -1.71
SHQ1-204ENST00000468347 TTLL4Q14679 1199 aa4.34□□□□□ -1.71
SHQ1-204ENST00000468347 RALGPS1Q5JS13 557 aa4.34□□□□□ -1.71
SHQ1-204ENST00000468347 UCN2Q96RP3 112 aa4.34□□□□□ -1.71
SHQ1-204ENST00000468347 DNAJC25Q9H1X3 360 aa4.34□□□□□ -1.71
SHQ1-204ENST00000468347 EPB41L4AQ9HCS5 686 aaPredicted RBP4.34□□□□□ -1.71
SHQ1-204ENST00000468347 SMPD4Q9NXE4 827 aa4.34□□□□□ -1.71
SHQ1-204ENST00000468347 HCLS1P14317 486 aaPredicted RBP4.33□□□□□ -1.72
SHQ1-204ENST00000468347 TRHRP34981 398 aaPredicted RBP4.33□□□□□ -1.72
SHQ1-204ENST00000468347 HK2P52789 917 aa4.33□□□□□ -1.72
SHQ1-204ENST00000468347 ID3Q02535 119 aa4.33□□□□□ -1.72
SHQ1-204ENST00000468347 CPZQ66K79 652 aa4.33□□□□□ -1.72
SHQ1-204ENST00000468347 KRTAP3-1Q9BYR8 98 aa4.33□□□□□ -1.72
SHQ1-204ENST00000468347 SAP130Q9H0E3 1048 aa4.33□□□□□ -1.72
SHQ1-204ENST00000468347 PCED1AQ9H1Q7 454 aa4.33□□□□□ -1.72
SHQ1-204ENST00000468347 TMEM59LQ9UK28 342 aa4.33□□□□□ -1.72
SHQ1-204ENST00000468347 PMEPA1Q969W9 287 aa4.32□□□□□ -1.72
SHQ1-204ENST00000468347 CHRDQ9H2X0 955 aa4.32□□□□□ -1.72
SHQ1-204ENST00000468347 CLEC4MQ9H2X3 399 aaPredicted RBP4.32□□□□□ -1.72
SHQ1-204ENST00000468347 SP110Q9HB58 689 aa4.32□□□□□ -1.72
SHQ1-204ENST00000468347 METTL12A8MUP2 240 aa4.31□□□□□ -1.72
SHQ1-204ENST00000468347 TNFRSF10BO14763 440 aa4.31□□□□□ -1.72
SHQ1-204ENST00000468347 UBXN11Q5T124 520 aa4.31□□□□□ -1.72
SHQ1-204ENST00000468347 LINC01356Q8N9X3 169 aa4.31□□□□□ -1.72
SHQ1-204ENST00000468347 IL27Q8NEV9 243 aa4.31□□□□□ -1.72
SHQ1-204ENST00000468347 C1QTNF3Q9BXJ4 246 aa4.31□□□□□ -1.72
SHQ1-204ENST00000468347 FOXQ1Q9C009 403 aa4.31□□□□□ -1.72
SHQ1-204ENST00000468347 LIG1P18858 919 aa4.3□□□□□ -1.72
SHQ1-204ENST00000468347 PTK7Q13308 1070 aa4.3□□□□□ -1.72
SHQ1-204ENST00000468347 C16orf46Q6P387 395 aa4.3□□□□□ -1.72
SHQ1-204ENST00000468347 LARP1Q6PKG0 1096 aaKnown RBP4.3□□□□□ -1.72
SHQ1-204ENST00000468347 CRIP3Q6Q6R5 217 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms