RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 HSP90AB4PQ58FF6 505 aa13.7□□□□□ -0.22
COL4A6-205ENST00000468338 PI16Q6UXB8 463 aa13.7□□□□□ -0.22
COL4A6-205ENST00000468338 ARMC9Q7Z3E5 817 aa13.7□□□□□ -0.22
COL4A6-205ENST00000468338 RASAL3Q86YV0 1011 aa13.7□□□□□ -0.22
COL4A6-205ENST00000468338 HOMEZQ8IX15 550 aa13.7□□□□□ -0.22
COL4A6-205ENST00000468338 IL27Q8NEV9 243 aa13.7□□□□□ -0.22
COL4A6-205ENST00000468338 ZNF384Q8TF68 577 aa13.7□□□□□ -0.22
COL4A6-205ENST00000468338 KDM4CQ9H3R0 1056 aa13.7□□□□□ -0.22
COL4A6-205ENST00000468338 DBNLQ9UJU6 430 aaKnown RBP13.7□□□□□ -0.22
COL4A6-205ENST00000468338 EXOC6BQ9Y2D4 811 aa13.7□□□□□ -0.22
COL4A6-205ENST00000468338 GALR2O43603 387 aaPredicted RBP13.69□□□□□ -0.22
COL4A6-205ENST00000468338 HMMRO75330 724 aa13.69□□□□□ -0.22
COL4A6-205ENST00000468338 USP2O75604 605 aaPredicted RBP13.69□□□□□ -0.22
COL4A6-205ENST00000468338 TNNI2P48788 182 aa13.69□□□□□ -0.22
COL4A6-205ENST00000468338 GORABQ5T7V8 394 aa13.69□□□□□ -0.22
COL4A6-205ENST00000468338 SPTY2D1Q68D10 685 aaPredicted RBP13.69□□□□□ -0.22
COL4A6-205ENST00000468338 CDC42EP5Q6NZY7 148 aa13.69□□□□□ -0.22
COL4A6-205ENST00000468338 CDAN1Q8IWY9 1227 aa13.69□□□□□ -0.22
COL4A6-205ENST00000468338 RHPN1Q8TCX5 695 aa13.69□□□□□ -0.22
COL4A6-205ENST00000468338 TMEM39BQ9GZU3 492 aa13.69□□□□□ -0.22
COL4A6-205ENST00000468338 RPAP1Q9BWH6 1393 aaPredicted RBP13.69□□□□□ -0.22
COL4A6-205ENST00000468338 TCP10L2B9ZVM9 353 aa13.68□□□□□ -0.22
COL4A6-205ENST00000468338 PPP1R12BO60237 982 aaPredicted RBP13.68□□□□□ -0.22
COL4A6-205ENST00000468338 IGSF3O75054 1194 aa13.68□□□□□ -0.22
COL4A6-205ENST00000468338 CTCFP49711 727 aaPredicted RBP13.68□□□□□ -0.22
COL4A6-205ENST00000468338 CACNB3P54284 484 aa13.68□□□□□ -0.22
COL4A6-205ENST00000468338 KIF23Q02241 960 aaPredicted RBP13.68□□□□□ -0.22
COL4A6-205ENST00000468338 CCDC158Q5M9N0 1113 aa13.68□□□□□ -0.22
COL4A6-205ENST00000468338 AIDAQ96BJ3 306 aa13.68□□□□□ -0.22
COL4A6-205ENST00000468338 PRDM10Q9NQV6 1147 aa13.68□□□□□ -0.22
COL4A6-205ENST00000468338 ABCF2Q9UG63 623 aa13.68□□□□□ -0.22
COL4A6-205ENST00000468338 ANGEL1Q9UNK9 670 aaKnown RBP13.68□□□□□ -0.22
COL4A6-205ENST00000468338 FZD1Q9UP38 647 aa13.68□□□□□ -0.22
COL4A6-205ENST00000468338 GPR75-ASB3A0A0A6YYF3 556 aa13.67□□□□□ -0.22
COL4A6-205ENST00000468338 CA12O43570 354 aa13.67□□□□□ -0.22
COL4A6-205ENST00000468338 HSPA8P11142 646 aaKnown RBP13.67□□□□□ -0.22
COL4A6-205ENST00000468338 RRP1P56182 461 aaKnown RBP13.67□□□□□ -0.22
COL4A6-205ENST00000468338 MECOMQ03112 1051 aa13.67□□□□□ -0.22
COL4A6-205ENST00000468338 TTLL12Q14166 644 aaPredicted RBP13.67□□□□□ -0.22
COL4A6-205ENST00000468338 COL13A1Q5TAT6 717 aaPredicted RBP13.67□□□□□ -0.22
COL4A6-205ENST00000468338 TBC1D9Q6ZT07 1266 aa13.67□□□□□ -0.22
COL4A6-205ENST00000468338 SLF2Q8IX21 1173 aa13.67□□□□□ -0.22
COL4A6-205ENST00000468338 PDCD7Q8N8D1 485 aaKnown RBP13.67□□□□□ -0.22
COL4A6-205ENST00000468338 NSUN4Q96CB9 384 aaKnown RBP13.67□□□□□ -0.22
COL4A6-205ENST00000468338 KIF1BPQ96EK5 621 aa13.67□□□□□ -0.22
COL4A6-205ENST00000468338 CSRNP1Q96S65 589 aa13.67□□□□□ -0.22
COL4A6-205ENST00000468338 CCDC8Q9H0W5 538 aaPredicted RBP13.67□□□□□ -0.22
COL4A6-205ENST00000468338 OCEL1Q9H607 264 aa13.67□□□□□ -0.22
COL4A6-205ENST00000468338 TLR7Q9NYK1 1049 aaKnown RBP13.67□□□□□ -0.22
COL4A6-205ENST00000468338 TMOD2Q9NZR1 351 aa13.67□□□□□ -0.22
COL4A6-205ENST00000468338 BOLA1Q9Y3E2 137 aa13.67□□□□□ -0.22
COL4A6-205ENST00000468338 RFX7Q2KHR2 1363 aa13.67□□□□□ -0.22
COL4A6-205ENST00000468338 GRXCR2A6NFK2 248 aa13.66□□□□□ -0.22
COL4A6-205ENST00000468338 RAB11FIP3O75154 756 aa13.66□□□□□ -0.22
COL4A6-205ENST00000468338 NFIAQ12857 509 aa13.66□□□□□ -0.22
COL4A6-205ENST00000468338 PRKG1Q13976 671 aa13.66□□□□□ -0.22
COL4A6-205ENST00000468338 TTC39AQ5SRH9 613 aa13.66□□□□□ -0.22
COL4A6-205ENST00000468338 DZIP1Q86YF9 867 aaKnown RBP13.66□□□□□ -0.22
COL4A6-205ENST00000468338 FAM151AQ8WW52 585 aa13.66□□□□□ -0.22
COL4A6-205ENST00000468338 YTHDC1Q96MU7 727 aaKnown RBP13.66□□□□□ -0.22
COL4A6-205ENST00000468338 IDI2Q9BXS1 227 aa13.66□□□□□ -0.22
COL4A6-205ENST00000468338 FAM198AQ9UFP1 575 aa13.66□□□□□ -0.22
COL4A6-205ENST00000468338 MROH7-TTC4A0A0A0MT08 1334 aa13.65□□□□□ -0.22
COL4A6-205ENST00000468338 MYO5AQ9Y4I1 1855 aaKnown RBP13.65□□□□□ -0.22
COL4A6-205ENST00000468338 C2orf72A6NCS6 295 aa13.65□□□□□ -0.22
COL4A6-205ENST00000468338 CYP2E1P05181 493 aaPredicted RBP13.65□□□□□ -0.22
COL4A6-205ENST00000468338 IREB2P48200 963 aaKnown RBP13.65□□□□□ -0.22
COL4A6-205ENST00000468338 BEGAINQ9BUH8 593 aa13.65□□□□□ -0.22
COL4A6-205ENST00000468338 USP40Q9NVE5 1235 aa13.65□□□□□ -0.22
COL4A6-205ENST00000468338 LAMB1P07942 1786 aa13.65□□□□□ -0.22
COL4A6-205ENST00000468338 OTOFQ9HC10 1997 aa13.64□□□□□ -0.23
COL4A6-205ENST00000468338 WDHD1O75717 1129 aaPredicted RBP13.64□□□□□ -0.23
COL4A6-205ENST00000468338 MAP4K4O95819 1239 aaPredicted RBP13.64□□□□□ -0.23
COL4A6-205ENST00000468338 TM4SF4P48230 202 aa13.64□□□□□ -0.23
COL4A6-205ENST00000468338 LBX1P52954 281 aa13.64□□□□□ -0.23
COL4A6-205ENST00000468338 RHBDL3P58872 404 aa13.64□□□□□ -0.23
COL4A6-205ENST00000468338 IER5LQ5T953 404 aa13.64□□□□□ -0.23
COL4A6-205ENST00000468338 SPRYD7Q5W111 196 aa13.64□□□□□ -0.23
COL4A6-205ENST00000468338 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.64□□□□□ -0.23
COL4A6-205ENST00000468338 AACSQ86V21 672 aa13.64□□□□□ -0.23
COL4A6-205ENST00000468338 ANKRD13AQ8IZ07 590 aa13.64□□□□□ -0.23
COL4A6-205ENST00000468338 CLASRPQ8N2M8 674 aaKnown RBP13.64□□□□□ -0.23
COL4A6-205ENST00000468338 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.64□□□□□ -0.23
COL4A6-205ENST00000468338 SLC10A4Q96EP9 437 aa13.64□□□□□ -0.23
COL4A6-205ENST00000468338 CLMNQ96JQ2 1002 aa13.64□□□□□ -0.23
COL4A6-205ENST00000468338 TMEM121BQ9BXQ6 578 aaPredicted RBP13.64□□□□□ -0.23
COL4A6-205ENST00000468338 IL1RAPL2Q9NP60 686 aa13.64□□□□□ -0.23
COL4A6-205ENST00000468338 SNRKQ9NRH2 765 aa13.64□□□□□ -0.23
COL4A6-205ENST00000468338 SAGE1Q9NXZ1 904 aa13.64□□□□□ -0.23
COL4A6-205ENST00000468338 ENTPD3O75355 529 aa13.63□□□□□ -0.23
COL4A6-205ENST00000468338 LDHCP07864 332 aa13.63□□□□□ -0.23
COL4A6-205ENST00000468338 ZBTB48P10074 688 aaPredicted RBP13.63□□□□□ -0.23
COL4A6-205ENST00000468338 BTDP43251 543 aa13.63□□□□□ -0.23
COL4A6-205ENST00000468338 ZAP70P43403 619 aa13.63□□□□□ -0.23
COL4A6-205ENST00000468338 GSTO1P78417 241 aa13.63□□□□□ -0.23
COL4A6-205ENST00000468338 ZFPM1Q8IX07 1006 aa13.63□□□□□ -0.23
COL4A6-205ENST00000468338 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL4A6-205ENST00000468338 HOOK2Q96ED9 719 aa13.63□□□□□ -0.23
COL4A6-205ENST00000468338 LRP2BPQ9P2M1 347 aa13.63□□□□□ -0.23
COL4A6-205ENST00000468338 ATRNL1Q5VV63 1379 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms