RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 PPIL2Q13356 520 aa16.52■□□□□ 0.24
C9orf3-212ENST00000468164 POLA2Q14181 598 aa16.52■□□□□ 0.24
C9orf3-212ENST00000468164 SSH3Q8TE77 659 aa16.52■□□□□ 0.24
C9orf3-212ENST00000468164 LRP2BPQ9P2M1 347 aa16.52■□□□□ 0.24
C9orf3-212ENST00000468164 MYH1P12882 1939 aa16.51■□□□□ 0.23
C9orf3-212ENST00000468164 ZBTB7BO15156 539 aaPredicted RBP16.51■□□□□ 0.23
C9orf3-212ENST00000468164 ENTPD3O75355 529 aa16.51■□□□□ 0.23
C9orf3-212ENST00000468164 UQCRFS1P1P0C7P4 283 aa16.51■□□□□ 0.23
C9orf3-212ENST00000468164 ARID4AP29374 1257 aaPredicted RBP16.51■□□□□ 0.23
C9orf3-212ENST00000468164 GSTO1P78417 241 aa16.51■□□□□ 0.23
C9orf3-212ENST00000468164 PPATQ06203 517 aa16.51■□□□□ 0.23
C9orf3-212ENST00000468164 TNNI3KQ59H18 835 aa16.51■□□□□ 0.23
C9orf3-212ENST00000468164 CCDC158Q5M9N0 1113 aa16.51■□□□□ 0.23
C9orf3-212ENST00000468164 DBNDD2Q9BQY9 259 aa16.51■□□□□ 0.23
C9orf3-212ENST00000468164 EFCC1Q9HA90 598 aa16.51■□□□□ 0.23
C9orf3-212ENST00000468164 FPGT-TNNI3KV9GXZ4 949 aa16.51■□□□□ 0.23
C9orf3-212ENST00000468164 DDTLA6NHG4 134 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-212ENST00000468164 BTBD19C9JJ37 291 aa16.5■□□□□ 0.23
C9orf3-212ENST00000468164 LDHCP07864 332 aa16.5■□□□□ 0.23
C9orf3-212ENST00000468164 SLURP2P0DP57 97 aa16.5■□□□□ 0.23
C9orf3-212ENST00000468164 NOL10Q9BSC4 688 aaKnown RBP16.5■□□□□ 0.23
C9orf3-212ENST00000468164 IDI2Q9BXS1 227 aa16.5■□□□□ 0.23
C9orf3-212ENST00000468164 BCL11AQ9H165 835 aa16.5■□□□□ 0.23
C9orf3-212ENST00000468164 DDX4Q9NQI0 724 aaKnown RBP16.5■□□□□ 0.23
C9orf3-212ENST00000468164 SH3BP5LQ7L8J4 393 aa16.49■□□□□ 0.23
C9orf3-212ENST00000468164 ZNF384Q8TF68 577 aa16.49■□□□□ 0.23
C9orf3-212ENST00000468164 NSUN4Q96CB9 384 aaKnown RBP16.49■□□□□ 0.23
C9orf3-212ENST00000468164 FAM163AQ96GL9 167 aaPredicted RBP16.49■□□□□ 0.23
C9orf3-212ENST00000468164 CCDC8Q9H0W5 538 aaPredicted RBP16.49■□□□□ 0.23
C9orf3-212ENST00000468164 ZNF112Q9UJU3 913 aa16.49■□□□□ 0.23
C9orf3-212ENST00000468164 RFX7Q2KHR2 1363 aa16.49■□□□□ 0.23
C9orf3-212ENST00000468164 RBBP6Q7Z6E9 1792 aaKnown RBP16.49■□□□□ 0.23
C9orf3-212ENST00000468164 GPR75-ASB3A0A0A6YYF3 556 aa16.48■□□□□ 0.23
C9orf3-212ENST00000468164 FAM196BA6NMK8 535 aa16.48■□□□□ 0.23
C9orf3-212ENST00000468164 ZBTB22O15209 634 aa16.48■□□□□ 0.23
C9orf3-212ENST00000468164 GPR108Q9NPR9 543 aa16.48■□□□□ 0.23
C9orf3-212ENST00000468164 PICK1Q9NRD5 415 aa16.48■□□□□ 0.23
C9orf3-212ENST00000468164 PTPN22Q9Y2R2 807 aa16.48■□□□□ 0.23
C9orf3-212ENST00000468164 KIAA0100Q14667 2235 aaKnown RBP16.47■□□□□ 0.23
C9orf3-212ENST00000468164 SIPA1L1O43166 1804 aa16.47■□□□□ 0.23
C9orf3-212ENST00000468164 CAP1Q01518 475 aa16.47■□□□□ 0.23
C9orf3-212ENST00000468164 NAA16Q6N069 864 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-212ENST00000468164 CEP85Q6P2H3 762 aa16.47■□□□□ 0.23
C9orf3-212ENST00000468164 TEX11Q8IYF3 940 aa16.47■□□□□ 0.23
C9orf3-212ENST00000468164 TLR7Q9NYK1 1049 aaKnown RBP16.47■□□□□ 0.23
C9orf3-212ENST00000468164 EXOC6BQ9Y2D4 811 aa16.47■□□□□ 0.23
C9orf3-212ENST00000468164 ZHX2Q9Y6X8 837 aa16.47■□□□□ 0.23
C9orf3-212ENST00000468164 APBB1O00213 710 aa16.46■□□□□ 0.23
C9orf3-212ENST00000468164 PDHXO00330 501 aa16.46■□□□□ 0.23
C9orf3-212ENST00000468164 TLR2O60603 784 aa16.46■□□□□ 0.23
C9orf3-212ENST00000468164 RHBDL3P58872 404 aa16.46■□□□□ 0.23
C9orf3-212ENST00000468164 KIF22Q14807 665 aa16.46■□□□□ 0.23
C9orf3-212ENST00000468164 ARHGEF6Q15052 776 aa16.46■□□□□ 0.23
C9orf3-212ENST00000468164 NOL9Q5SY16 702 aaKnown RBP16.46■□□□□ 0.23
C9orf3-212ENST00000468164 SCYL3Q8IZE3 742 aa16.46■□□□□ 0.23
C9orf3-212ENST00000468164 SH3RF3Q8TEJ3 882 aaPredicted RBP16.46■□□□□ 0.23
C9orf3-212ENST00000468164 AATFQ9NY61 560 aaKnown RBP eCLIP16.46■□□□□ 0.23
C9orf3-212ENST00000468164 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.46■□□□□ 0.23
C9orf3-212ENST00000468164 CPA4Q9UI42 421 aa16.46■□□□□ 0.23
C9orf3-212ENST00000468164 ATRNL1Q5VV63 1379 aa16.46■□□□□ 0.23
C9orf3-212ENST00000468164 PHF20L1A8MW92 1017 aa16.45■□□□□ 0.22
C9orf3-212ENST00000468164 CYP2E1P05181 493 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-212ENST00000468164 ZAP70P43403 619 aa16.45■□□□□ 0.22
C9orf3-212ENST00000468164 GADL1Q6ZQY3 521 aa16.45■□□□□ 0.22
C9orf3-212ENST00000468164 CCDC84Q86UT8 332 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-212ENST00000468164 ARHGAP39Q9C0H5 1083 aa16.45■□□□□ 0.22
C9orf3-212ENST00000468164 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.45■□□□□ 0.224e-14■■■■■ 46.8
C9orf3-212ENST00000468164 DBNLQ9UJU6 430 aaKnown RBP16.45■□□□□ 0.22
C9orf3-212ENST00000468164 KCNH4Q9UQ05 1017 aa16.45■□□□□ 0.22
C9orf3-212ENST00000468164 NOP58Q9Y2X3 529 aaKnown RBP16.45■□□□□ 0.22
C9orf3-212ENST00000468164 MYCP01106 439 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-212ENST00000468164 MS4A1P11836 297 aa16.44■□□□□ 0.22
C9orf3-212ENST00000468164 PTPRAP18433 802 aa16.44■□□□□ 0.22
C9orf3-212ENST00000468164 ANKRD23Q86SG2 305 aa16.44■□□□□ 0.22
C9orf3-212ENST00000468164 EAF2Q96CJ1 260 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-212ENST00000468164 OSBPL5Q9H0X9 879 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-212ENST00000468164 ZCCHC17Q9NP64 241 aaKnown RBP16.44■□□□□ 0.22
C9orf3-212ENST00000468164 COG6Q9Y2V7 657 aa16.44■□□□□ 0.22
C9orf3-212ENST00000468164 NDUFB9Q9Y6M9 179 aa16.44■□□□□ 0.22
C9orf3-212ENST00000468164 MYH8P13535 1937 aa16.43■□□□□ 0.22
C9orf3-212ENST00000468164 TRIM75PA6NK02 468 aa16.43■□□□□ 0.22
C9orf3-212ENST00000468164 BAG3O95817 575 aa16.43■□□□□ 0.22
C9orf3-212ENST00000468164 AACSQ86V21 672 aa16.43■□□□□ 0.22
C9orf3-212ENST00000468164 IL1RAPL2Q9NP60 686 aa16.43■□□□□ 0.22
C9orf3-212ENST00000468164 PTCH2Q9Y6C5 1203 aa16.43■□□□□ 0.22
C9orf3-212ENST00000468164 DOCK3Q8IZD9 2030 aa16.43■□□□□ 0.22
C9orf3-212ENST00000468164 MYH7P12883 1935 aa16.43■□□□□ 0.22
C9orf3-212ENST00000468164 NAV1Q8NEY1 1877 aa16.42■□□□□ 0.22
C9orf3-212ENST00000468164 LOC285556D6RIA3 1793 aa16.42■□□□□ 0.22
C9orf3-212ENST00000468164 BRCA2P51587 3418 aa16.42■□□□□ 0.22
C9orf3-212ENST00000468164 CXCL11O14625 94 aa16.42■□□□□ 0.22
C9orf3-212ENST00000468164 CTNND1O60716 968 aaKnown RBP16.42■□□□□ 0.22
C9orf3-212ENST00000468164 IDH1O75874 414 aaKnown RBP16.42■□□□□ 0.22
C9orf3-212ENST00000468164 CYP2C8P10632 490 aa16.42■□□□□ 0.22
C9orf3-212ENST00000468164 LACTBP83111 547 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-212ENST00000468164 SLC9C1Q4G0N8 1177 aa16.42■□□□□ 0.22
C9orf3-212ENST00000468164 ADGRA1Q86SQ6 560 aa16.42■□□□□ 0.22
C9orf3-212ENST00000468164 ERC1Q8IUD2 1116 aa16.42■□□□□ 0.22
C9orf3-212ENST00000468164 MAPKAPK5Q8IW41 473 aa16.42■□□□□ 0.22
C9orf3-212ENST00000468164 TGFBRAP1Q8WUH2 860 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms