RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 SREBF2Q12772 1141 aa22.7■■□□□ 1.22
YBX1-204ENST00000467957 PICALMQ13492 652 aa22.7■■□□□ 1.22
YBX1-204ENST00000467957 VGLL4Q14135 290 aa22.7■■□□□ 1.22
YBX1-204ENST00000467957 COL13A1Q5TAT6 717 aaPredicted RBP22.7■■□□□ 1.22
YBX1-204ENST00000467957 MIGA2Q7L4E1 593 aa22.7■■□□□ 1.22
YBX1-204ENST00000467957 SH3BP5LQ7L8J4 393 aa22.7■■□□□ 1.22
YBX1-204ENST00000467957 WRNIP1Q96S55 665 aa22.7■■□□□ 1.22
YBX1-204ENST00000467957 AATFQ9NY61 560 aaKnown RBP eCLIP22.7■■□□□ 1.22
YBX1-204ENST00000467957 ZNF112Q9UJU3 913 aa22.7■■□□□ 1.22
YBX1-204ENST00000467957 CSADQ9Y600 493 aa22.7■■□□□ 1.22
YBX1-204ENST00000467957 CYP7A1P22680 504 aa22.69■■□□□ 1.22
YBX1-204ENST00000467957 INHBEP58166 350 aa22.69■■□□□ 1.22
YBX1-204ENST00000467957 MAP3K10Q02779 954 aa22.69■■□□□ 1.22
YBX1-204ENST00000467957 MKRN3Q13064 507 aaKnown RBP22.69■■□□□ 1.22
YBX1-204ENST00000467957 HDAC1Q13547 482 aaPredicted RBP22.69■■□□□ 1.22
YBX1-204ENST00000467957 CERS3Q8IU89 383 aa22.69■■□□□ 1.22
YBX1-204ENST00000467957 TEX11Q8IYF3 940 aa22.69■■□□□ 1.22
YBX1-204ENST00000467957 SH3RF3Q8TEJ3 882 aaPredicted RBP22.69■■□□□ 1.22
YBX1-204ENST00000467957 ELP3Q9H9T3 547 aa22.69■■□□□ 1.22
YBX1-204ENST00000467957 RNF186Q9NXI6 227 aa22.69■■□□□ 1.22
YBX1-204ENST00000467957 DDTLA6NHG4 134 aaPredicted RBP22.68■■□□□ 1.22
YBX1-204ENST00000467957 MANSC4A6NHS7 340 aaPredicted RBP22.68■■□□□ 1.22
YBX1-204ENST00000467957 GJA5P36382 358 aa22.68■■□□□ 1.22
YBX1-204ENST00000467957 ZSCAN29Q8IWY8 852 aaPredicted RBP22.68■■□□□ 1.22
YBX1-204ENST00000467957 MAGEB6Q8N7X4 407 aa22.68■■□□□ 1.22
YBX1-204ENST00000467957 DNAJC2Q99543 621 aaKnown RBP22.68■■□□□ 1.22
YBX1-204ENST00000467957 HAUS7Q99871 368 aa22.68■■□□□ 1.22
YBX1-204ENST00000467957 OSBPL5Q9H0X9 879 aaPredicted RBP22.68■■□□□ 1.22
YBX1-204ENST00000467957 BOLA2Q9H3K6 86 aa22.68■■□□□ 1.22
YBX1-204ENST00000467957 SUPT16HQ9Y5B9 1047 aaKnown RBP22.68■■□□□ 1.22
YBX1-204ENST00000467957 GOLIM4O00461 696 aa22.67■■□□□ 1.22
YBX1-204ENST00000467957 OPTNQ96CV9 577 aa22.67■■□□□ 1.22
YBX1-204ENST00000467957 ECHDC1Q9NTX5 307 aa22.67■■□□□ 1.22
YBX1-204ENST00000467957 SNCAIPQ9Y6H5 919 aa22.67■■□□□ 1.22
YBX1-204ENST00000467957 FOCADQ5VW36 1801 aa22.66■■□□□ 1.22
YBX1-204ENST00000467957 SPDYE5A6NIY4 337 aa22.66■■□□□ 1.22
YBX1-204ENST00000467957 ZKSCAN4Q969J2 545 aaPredicted RBP22.66■■□□□ 1.22
YBX1-204ENST00000467957 PAG1Q9NWQ8 432 aa22.66■■□□□ 1.22
YBX1-204ENST00000467957 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.66■■□□□ 1.22
YBX1-204ENST00000467957 TSKSQ9UJT2 592 aa22.66■■□□□ 1.22
YBX1-204ENST00000467957 CDK5RAP2Q96SN8 1893 aa22.66■■□□□ 1.22
YBX1-204ENST00000467957 TRPA1O75762 1119 aa22.65■■□□□ 1.22
YBX1-204ENST00000467957 INPP5BP32019 993 aa22.65■■□□□ 1.22
YBX1-204ENST00000467957 ERO1BQ86YB8 467 aa22.65■■□□□ 1.22
YBX1-204ENST00000467957 GCC1Q96CN9 775 aa22.65■■□□□ 1.22
YBX1-204ENST00000467957 TESPA1A2RU30 521 aaPredicted RBP22.64■■□□□ 1.21
YBX1-204ENST00000467957 PHF20L1A8MW92 1017 aa22.64■■□□□ 1.21
YBX1-204ENST00000467957 TBC1D12O60347 775 aa22.64■■□□□ 1.21
YBX1-204ENST00000467957 PDE6AP16499 860 aa22.64■■□□□ 1.21
YBX1-204ENST00000467957 NOL9Q5SY16 702 aaKnown RBP22.64■■□□□ 1.21
YBX1-204ENST00000467957 SLC9C2Q5TAH2 1124 aa22.64■■□□□ 1.21
YBX1-204ENST00000467957 EDC3Q96F86 508 aaKnown RBP22.64■■□□□ 1.21
YBX1-204ENST00000467957 GPATCH3Q96I76 525 aa22.64■■□□□ 1.21
YBX1-204ENST00000467957 DYNLL1P63167 89 aaKnown RBP22.63■■□□□ 1.21
YBX1-204ENST00000467957 MIGA1Q8NAN2 632 aa22.63■■□□□ 1.21
YBX1-204ENST00000467957 EXOC6Q8TAG9 804 aa22.63■■□□□ 1.21
YBX1-204ENST00000467957 CNKSR2Q8WXI2 1034 aa22.63■■□□□ 1.21
YBX1-204ENST00000467957 CFHR5Q9BXR6 569 aa22.63■■□□□ 1.21
YBX1-204ENST00000467957 DHX36Q9H2U1 1008 aaKnown RBP22.63■■□□□ 1.21
YBX1-204ENST00000467957 FLT1P17948 1338 aa22.62■■□□□ 1.21
YBX1-204ENST00000467957 TCRBV5S4A2TA0A5A2 114 aa22.62■■□□□ 1.21
YBX1-204ENST00000467957 ALDH1A1P00352 501 aa22.62■■□□□ 1.21
YBX1-204ENST00000467957 PPATQ06203 517 aa22.62■■□□□ 1.21
YBX1-204ENST00000467957 IFNL1Q8IU54 200 aa22.62■■□□□ 1.21
YBX1-204ENST00000467957 TGFBRAP1Q8WUH2 860 aa22.62■■□□□ 1.21
YBX1-204ENST00000467957 OTUD5Q96G74 571 aa22.62■■□□□ 1.21
YBX1-204ENST00000467957 MS4A4AQ96JQ5 239 aa22.62■■□□□ 1.21
YBX1-204ENST00000467957 RIOK1Q9BRS2 568 aaKnown RBP22.62■■□□□ 1.21
YBX1-204ENST00000467957 GTF2A2P52657 109 aa22.61■■□□□ 1.21
YBX1-204ENST00000467957 PPIL2Q13356 520 aa22.61■■□□□ 1.21
YBX1-204ENST00000467957 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.61■■□□□ 1.21
YBX1-204ENST00000467957 PI4KBQ9UBF8 816 aa22.61■■□□□ 1.21
YBX1-204ENST00000467957 TTC41PQ6P2S7 1318 aa22.6■■□□□ 1.21
YBX1-204ENST00000467957 ZNF532Q9HCE3 1301 aa22.6■■□□□ 1.21
YBX1-204ENST00000467957 MAPKAPK5Q8IW41 473 aa22.6■■□□□ 1.21
YBX1-204ENST00000467957 RWDD1Q9H446 243 aaPredicted RBP22.6■■□□□ 1.21
YBX1-204ENST00000467957 HERC5Q9UII4 1024 aaKnown RBP22.6■■□□□ 1.21
YBX1-204ENST00000467957 MAGEB6P1A0A0J9YX57 407 aa22.59■■□□□ 1.21
YBX1-204ENST00000467957 ADD2P35612 726 aa22.59■■□□□ 1.21
YBX1-204ENST00000467957 NOM1Q5C9Z4 860 aaKnown RBP22.59■■□□□ 1.21
YBX1-204ENST00000467957 OTUD7BQ6GQQ9 843 aa22.59■■□□□ 1.21
YBX1-204ENST00000467957 METTL16Q86W50 562 aaKnown RBP22.59■■□□□ 1.21
YBX1-204ENST00000467957 SCYL3Q8IZE3 742 aa22.59■■□□□ 1.21
YBX1-204ENST00000467957 IGF2BP3O00425 579 aaKnown RBP eCLIP22.58■■□□□ 1.21
YBX1-204ENST00000467957 CTNND1O60716 968 aaKnown RBP22.58■■□□□ 1.21
YBX1-204ENST00000467957 SLURP2P0DP57 97 aa22.58■■□□□ 1.21
YBX1-204ENST00000467957 UBE3CQ15386 1083 aa22.58■■□□□ 1.21
YBX1-204ENST00000467957 ANKRD45Q5TZF3 282 aa22.58■■□□□ 1.21
YBX1-204ENST00000467957 PTPN18Q99952 460 aa22.58■■□□□ 1.21
YBX1-204ENST00000467957 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.58■■□□□ 1.215e-7■■■■□ 24.7
YBX1-204ENST00000467957 ZBTB47Q9UFB7 747 aaPredicted RBP22.58■■□□□ 1.21
YBX1-204ENST00000467957 SIPA1L1O43166 1804 aa22.58■■□□□ 1.21
YBX1-204ENST00000467957 MYH7P12883 1935 aa22.58■■□□□ 1.21
YBX1-204ENST00000467957 SALL3Q9BXA9 1300 aa22.57■■□□□ 1.2
YBX1-204ENST00000467957 IRF6O14896 467 aa22.57■■□□□ 1.2
YBX1-204ENST00000467957 USP5P45974 858 aa22.57■■□□□ 1.2
YBX1-204ENST00000467957 ZSCAN25Q6NSZ9 544 aa22.57■■□□□ 1.2
YBX1-204ENST00000467957 FOXP4Q8IVH2 680 aaPredicted RBP22.57■■□□□ 1.2
YBX1-204ENST00000467957 SMC5Q8IY18 1101 aa22.57■■□□□ 1.2
YBX1-204ENST00000467957 TNS4Q8IZW8 715 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms