RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 A0A0G2JLL6 359 aaPredicted RBP15.05■□□□□ -0
VPS26A-204ENST00000467852 DNAJB2P25686 324 aa15.05■□□□□ -0
VPS26A-204ENST00000467852 ATN1P54259 1190 aaPredicted RBP15.05■□□□□ -0
VPS26A-204ENST00000467852 CCDC85BQ15834 202 aaPredicted RBP15.05■□□□□ -0
VPS26A-204ENST00000467852 PRRT2Q7Z6L0 340 aaPredicted RBP15.05■□□□□ -0
VPS26A-204ENST00000467852 TRIB2Q92519 343 aa15.05■□□□□ -0
VPS26A-204ENST00000467852 BADQ92934 168 aa15.05■□□□□ -0
VPS26A-204ENST00000467852 RNPC3Q96LT9 517 aaKnown RBP15.05■□□□□ -0
VPS26A-204ENST00000467852 ZNF112Q9UJU3 913 aa15.05■□□□□ -0
VPS26A-204ENST00000467852 BMP1P13497 986 aa15.04■□□□□ -0
VPS26A-204ENST00000467852 RTP1P59025 263 aa15.04■□□□□ -0
VPS26A-204ENST00000467852 KRT24Q2M2I5 525 aa15.04■□□□□ -0
VPS26A-204ENST00000467852 AAK1Q2M2I8 961 aa15.04■□□□□ -0
VPS26A-204ENST00000467852 NOL9Q5SY16 702 aaKnown RBP15.04■□□□□ -0
VPS26A-204ENST00000467852 PRDM5Q9NQX1 630 aaPredicted RBP15.04■□□□□ -0
VPS26A-204ENST00000467852 MAPK8IP3Q9UPT6 1336 aa15.03■□□□□ -0
VPS26A-204ENST00000467852 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.03■□□□□ -0
VPS26A-204ENST00000467852 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.03■□□□□ -0
VPS26A-204ENST00000467852 SNAP23O00161 211 aa15.03■□□□□ -0
VPS26A-204ENST00000467852 FKBP1CQ5VVH2 108 aa15.03■□□□□ -0
VPS26A-204ENST00000467852 LHX8Q68G74 356 aa15.03■□□□□ -0
VPS26A-204ENST00000467852 ATP11BQ9Y2G3 1177 aa15.03■□□□□ -0
VPS26A-204ENST00000467852 TAF5LO75529 589 aa15.02■□□□□ -0
VPS26A-204ENST00000467852 HOXB7P09629 217 aa15.02■□□□□ -0
VPS26A-204ENST00000467852 CYP2B6P20813 491 aa15.02■□□□□ -0
VPS26A-204ENST00000467852 ITGA6P23229 1130 aa15.02■□□□□ -0
VPS26A-204ENST00000467852 TRMT44Q8IYL2 757 aaKnown RBP15.02■□□□□ -0
VPS26A-204ENST00000467852 TIFAQ96CG3 184 aa15.02■□□□□ -0
VPS26A-204ENST00000467852 PLEKHF1Q96S99 279 aa15.02■□□□□ -0
VPS26A-204ENST00000467852 PNNQ9H307 717 aaKnown RBP15.02■□□□□ -0
VPS26A-204ENST00000467852 CXXC1Q9P0U4 656 aaPredicted RBP15.02■□□□□ -0
VPS26A-204ENST00000467852 PNMA3Q9UL41 463 aa15.02■□□□□ -0
VPS26A-204ENST00000467852 ZHX2Q9Y6X8 837 aa15.02■□□□□ -0
VPS26A-204ENST00000467852 RPAP1Q9BWH6 1393 aaPredicted RBP15.01□□□□□ -0.01
VPS26A-204ENST00000467852 CACNB2Q08289 660 aaPredicted RBP15.01□□□□□ -0.01
VPS26A-204ENST00000467852 SPDYE1Q8NFV5 336 aaPredicted RBP15.01□□□□□ -0.01
VPS26A-204ENST00000467852 SMIM22K7EJ46 135 aa15□□□□□ -0.01
VPS26A-204ENST00000467852 IGFBP4P22692 258 aa15□□□□□ -0.01
VPS26A-204ENST00000467852 GCLCP48506 637 aaPredicted RBP15□□□□□ -0.01
VPS26A-204ENST00000467852 HDLBPQ00341 1268 aaKnown RBP15□□□□□ -0.01
VPS26A-204ENST00000467852 TEKT1Q969V4 418 aa15□□□□□ -0.01
VPS26A-204ENST00000467852 METTL22Q9BUU2 404 aaPredicted RBP15□□□□□ -0.01
VPS26A-204ENST00000467852 PRDM12Q9H4Q4 367 aa15□□□□□ -0.01
VPS26A-204ENST00000467852 PICK1Q9NRD5 415 aa15□□□□□ -0.01
VPS26A-204ENST00000467852 PTPRFP10586 1907 aa15□□□□□ -0.01
VPS26A-204ENST00000467852 PLXNB2O15031 1838 aa14.99□□□□□ -0.01
VPS26A-204ENST00000467852 FAM86C2PA6NEL3 165 aa14.99□□□□□ -0.01
VPS26A-204ENST00000467852 XRCC5P13010 732 aaKnown RBP14.99□□□□□ -0.01
VPS26A-204ENST00000467852 ZKSCAN1P17029 563 aaPredicted RBP14.99□□□□□ -0.01
VPS26A-204ENST00000467852 CCND3P30281 292 aaPredicted RBP14.99□□□□□ -0.01
VPS26A-204ENST00000467852 NUDT12Q9BQG2 462 aa14.99□□□□□ -0.01
VPS26A-204ENST00000467852 FRMPD3Q5JV73 1810 aa14.99□□□□□ -0.01
VPS26A-204ENST00000467852 PPP2R1AP30153 589 aa14.98□□□□□ -0.01
VPS26A-204ENST00000467852 RIPK4P57078 832 aa14.98□□□□□ -0.01
VPS26A-204ENST00000467852 FOXK2Q01167 660 aa14.98□□□□□ -0.01
VPS26A-204ENST00000467852 PHAXQ9H814 394 aaKnown RBP14.98□□□□□ -0.01
VPS26A-204ENST00000467852 C11orf16Q9NQ32 467 aa14.98□□□□□ -0.01
VPS26A-204ENST00000467852 AGTPBP1Q9UPW5 1226 aa14.98□□□□□ -0.01
VPS26A-204ENST00000467852 AFG3L2Q9Y4W6 797 aa14.98□□□□□ -0.01
VPS26A-204ENST00000467852 TDRD7Q8NHU6 1098 aaKnown RBP14.97□□□□□ -0.01
VPS26A-204ENST00000467852 FAM151AQ8WW52 585 aa14.97□□□□□ -0.01
VPS26A-204ENST00000467852 DNM1LO00429 736 aa14.96□□□□□ -0.01
VPS26A-204ENST00000467852 CHL1O00533 1208 aa14.96□□□□□ -0.01
VPS26A-204ENST00000467852 DDX58O95786 925 aaKnown RBP14.96□□□□□ -0.01
VPS26A-204ENST00000467852 PTPRAP18433 802 aa14.96□□□□□ -0.01
VPS26A-204ENST00000467852 NHLH1Q02575 133 aa14.96□□□□□ -0.01
VPS26A-204ENST00000467852 LMOD3Q0VAK6 560 aa14.96□□□□□ -0.01
VPS26A-204ENST00000467852 SCYL3Q8IZE3 742 aa14.96□□□□□ -0.01
VPS26A-204ENST00000467852 SOCS4Q8WXH5 440 aa14.96□□□□□ -0.01
VPS26A-204ENST00000467852 ZDHHC15Q96MV8 337 aa14.96□□□□□ -0.01
VPS26A-204ENST00000467852 LAS1LQ9Y4W2 734 aaKnown RBP14.96□□□□□ -0.01
VPS26A-204ENST00000467852 RLFQ13129 1914 aa14.96□□□□□ -0.02
VPS26A-204ENST00000467852 PLXNA1Q9UIW2 1896 aa14.95□□□□□ -0.02
VPS26A-204ENST00000467852 KCNQ1P51787 676 aa14.95□□□□□ -0.02
VPS26A-204ENST00000467852 TFF2Q03403 129 aa14.95□□□□□ -0.02
VPS26A-204ENST00000467852 SLC39A5Q6ZMH5 540 aa14.95□□□□□ -0.02
VPS26A-204ENST00000467852 PDLIM7Q9NR12 457 aa14.95□□□□□ -0.02
VPS26A-204ENST00000467852 XIRP2A4UGR9 3374 aa14.94□□□□□ -0.02
VPS26A-204ENST00000467852 ANKRD18BA2A2Z9 1011 aa14.94□□□□□ -0.02
VPS26A-204ENST00000467852 TRIM75PA6NK02 468 aa14.94□□□□□ -0.02
VPS26A-204ENST00000467852 PRR33A8MZF0 331 aa14.94□□□□□ -0.02
VPS26A-204ENST00000467852 MSCO60682 206 aa14.94□□□□□ -0.02
VPS26A-204ENST00000467852 ADGRE1Q14246 886 aa14.94□□□□□ -0.02
VPS26A-204ENST00000467852 CCDC129Q6ZRS4 1044 aa14.94□□□□□ -0.02
VPS26A-204ENST00000467852 LPAR1Q92633 364 aa14.94□□□□□ -0.02
VPS26A-204ENST00000467852 MRIQ9BWK5 157 aa14.94□□□□□ -0.02
VPS26A-204ENST00000467852 RTN4Q9NQC3 1192 aaKnown RBP14.94□□□□□ -0.02
VPS26A-204ENST00000467852 A0A1B0GUL6 1792 aa14.93□□□□□ -0.02
VPS26A-204ENST00000467852 TRIM43BA6NCK2 446 aa14.93□□□□□ -0.02
VPS26A-204ENST00000467852 HIBADHP31937 336 aaKnown RBP14.93□□□□□ -0.02
VPS26A-204ENST00000467852 TCP10Q12799 353 aa14.93□□□□□ -0.02
VPS26A-204ENST00000467852 PABPC4Q13310 644 aaKnown RBP eCLIP14.93□□□□□ -0.02
VPS26A-204ENST00000467852 TREML2Q5T2D2 321 aa14.93□□□□□ -0.02
VPS26A-204ENST00000467852 DUSP27Q5VZP5 1158 aa14.93□□□□□ -0.02
VPS26A-204ENST00000467852 APOBEC3HQ6NTF7 200 aaKnown RBP14.93□□□□□ -0.02
VPS26A-204ENST00000467852 SH3RF1Q7Z6J0 888 aa14.93□□□□□ -0.02
VPS26A-204ENST00000467852 TRIM43Q96BQ3 446 aaPredicted RBP14.93□□□□□ -0.02
VPS26A-204ENST00000467852 PLIN1O60240 522 aa14.92□□□□□ -0.02
VPS26A-204ENST00000467852 NEXNQ0ZGT2 675 aa14.92□□□□□ -0.02
VPS26A-204ENST00000467852 GRIK5Q16478 980 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms