RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 KLHDC7BQ96G42 594 aa6.64□□□□□ -1.35
SSR3-204ENST00000467733 RUSC1Q9BVN2 902 aa6.64□□□□□ -1.35
SSR3-204ENST00000467733 CXXC1Q9P0U4 656 aaPredicted RBP6.64□□□□□ -1.35
SSR3-204ENST00000467733 PIM2Q9P1W9 311 aa6.64□□□□□ -1.35
SSR3-204ENST00000467733 ADGRE2Q9UHX3 823 aa6.64□□□□□ -1.35
SSR3-204ENST00000467733 ANGEL1Q9UNK9 670 aaKnown RBP6.64□□□□□ -1.35
SSR3-204ENST00000467733 DUOX2Q9NRD8 1548 aa6.64□□□□□ -1.35
SSR3-204ENST00000467733 NHSL1Q5SYE7 1610 aa6.64□□□□□ -1.35
SSR3-204ENST00000467733 CROCC2H7BZ55 1655 aa6.64□□□□□ -1.35
SSR3-204ENST00000467733 RXRBP28702 533 aa6.63□□□□□ -1.35
SSR3-204ENST00000467733 FZD5Q13467 585 aa6.63□□□□□ -1.35
SSR3-204ENST00000467733 ADAMTSL4Q6UY14 1074 aa6.63□□□□□ -1.35
SSR3-204ENST00000467733 POP1Q99575 1024 aaKnown RBP6.63□□□□□ -1.35
SSR3-204ENST00000467733 STIM2Q9P246 746 aa6.63□□□□□ -1.35
SSR3-204ENST00000467733 SLAIN2Q9P270 581 aa6.63□□□□□ -1.35
SSR3-204ENST00000467733 SETBP1Q9Y6X0 1596 aa6.62□□□□□ -1.35
SSR3-204ENST00000467733 MEGF11A6BM72 1044 aa6.62□□□□□ -1.35
SSR3-204ENST00000467733 WDR64B1ANS9 1081 aa6.62□□□□□ -1.35
SSR3-204ENST00000467733 CYP2E1P05181 493 aaPredicted RBP6.62□□□□□ -1.35
SSR3-204ENST00000467733 RPLP1P05386 114 aaKnown RBP6.62□□□□□ -1.35
SSR3-204ENST00000467733 ARL4DP49703 201 aa6.62□□□□□ -1.35
SSR3-204ENST00000467733 CDCA8Q53HL2 280 aa6.62□□□□□ -1.35
SSR3-204ENST00000467733 MKNK1Q9BUB5 465 aa6.62□□□□□ -1.35
SSR3-204ENST00000467733 ZMIZ1Q9ULJ6 1067 aa6.62□□□□□ -1.35
SSR3-204ENST00000467733 NCOA3Q9Y6Q9 1424 aa6.61□□□□□ -1.35
SSR3-204ENST00000467733 NLRP12P59046 1061 aa6.61□□□□□ -1.35
SSR3-204ENST00000467733 ZNF438Q7Z4V0 828 aa6.61□□□□□ -1.35
SSR3-204ENST00000467733 CCDC97Q96F63 343 aaPredicted RBP6.61□□□□□ -1.35
SSR3-204ENST00000467733 MFSD14AQ96MC6 490 aa6.61□□□□□ -1.35
SSR3-204ENST00000467733 ELP3Q9H9T3 547 aa6.61□□□□□ -1.35
SSR3-204ENST00000467733 ATG3Q9NT62 314 aa6.61□□□□□ -1.35
SSR3-204ENST00000467733 LEMD3Q9Y2U8 911 aa6.61□□□□□ -1.35
SSR3-204ENST00000467733 GCC2Q8IWJ2 1684 aa6.61□□□□□ -1.35
SSR3-204ENST00000467733 LRP5O75197 1615 aa6.61□□□□□ -1.35
SSR3-204ENST00000467733 LMTK2Q8IWU2 1503 aa6.6□□□□□ -1.35
SSR3-204ENST00000467733 ERBINQ96RT1 1412 aa6.6□□□□□ -1.35
SSR3-204ENST00000467733 ARID1BQ8NFD5 2236 aaPredicted RBP6.6□□□□□ -1.35
SSR3-204ENST00000467733 AFF2P51816 1311 aa6.6□□□□□ -1.35
SSR3-204ENST00000467733 TSPY4P0CV99 314 aa6.6□□□□□ -1.35
SSR3-204ENST00000467733 TSPY10P0CW01 314 aa6.6□□□□□ -1.35
SSR3-204ENST00000467733 MAP4P27816 1152 aaKnown RBP6.6□□□□□ -1.35
SSR3-204ENST00000467733 ASXL1Q8IXJ9 1541 aa6.6□□□□□ -1.35
SSR3-204ENST00000467733 FOSL1P15407 271 aa6.59□□□□□ -1.35
SSR3-204ENST00000467733 C19orf57Q0VDD7 668 aa6.59□□□□□ -1.35
SSR3-204ENST00000467733 NAA30Q147X3 362 aaPredicted RBP6.59□□□□□ -1.35
SSR3-204ENST00000467733 LCE1DQ5T752 114 aa6.59□□□□□ -1.35
SSR3-204ENST00000467733 VSIG10LQ86VR7 867 aa6.59□□□□□ -1.35
SSR3-204ENST00000467733 ABI1Q8IZP0 508 aa6.59□□□□□ -1.35
SSR3-204ENST00000467733 SLC7A3Q8WY07 619 aa6.59□□□□□ -1.35
SSR3-204ENST00000467733 NUDT16Q96DE0 195 aaKnown RBP6.59□□□□□ -1.35
SSR3-204ENST00000467733 FBXL18Q96ME1 805 aa6.59□□□□□ -1.35
SSR3-204ENST00000467733 SLC26A8Q96RN1 970 aa6.59□□□□□ -1.35
SSR3-204ENST00000467733 METTL22Q9BUU2 404 aaPredicted RBP6.59□□□□□ -1.35
SSR3-204ENST00000467733 OSBPL1AQ9BXW6 950 aa6.59□□□□□ -1.35
SSR3-204ENST00000467733 TMEM63CQ9P1W3 806 aa6.59□□□□□ -1.35
SSR3-204ENST00000467733 KANSL3Q9P2N6 904 aa6.59□□□□□ -1.35
SSR3-204ENST00000467733 SALL4Q9UJQ4 1053 aa6.59□□□□□ -1.35
SSR3-204ENST00000467733 SERPINA10Q9UK55 444 aa6.59□□□□□ -1.35
SSR3-204ENST00000467733 ZFYVE9O95405 1425 aa6.59□□□□□ -1.36
SSR3-204ENST00000467733 NOS1P29475 1434 aa6.59□□□□□ -1.36
SSR3-204ENST00000467733 DCCP43146 1447 aa6.59□□□□□ -1.36
SSR3-204ENST00000467733 SETD5Q9C0A6 1442 aa6.59□□□□□ -1.36
SSR3-204ENST00000467733 PLEKHG1Q9ULL1 1385 aa6.58□□□□□ -1.36
SSR3-204ENST00000467733 PDE2AO00408 941 aaPredicted RBP6.58□□□□□ -1.36
SSR3-204ENST00000467733 PRNPP04156 253 aa6.58□□□□□ -1.36
SSR3-204ENST00000467733 PCSK2P16519 638 aa6.58□□□□□ -1.36
SSR3-204ENST00000467733 HOXA10P31260 410 aaPredicted RBP6.58□□□□□ -1.36
SSR3-204ENST00000467733 MSMPQ1L6U9 139 aa6.58□□□□□ -1.36
SSR3-204ENST00000467733 NUTM2GQ5VZR2 741 aa6.58□□□□□ -1.36
SSR3-204ENST00000467733 STK32AQ8WU08 396 aa6.58□□□□□ -1.36
SSR3-204ENST00000467733 CYP4F12Q9HCS2 524 aa6.58□□□□□ -1.36
SSR3-204ENST00000467733 SOX13Q9UN79 622 aa6.58□□□□□ -1.36
SSR3-204ENST00000467733 XRN1Q8IZH2 1706 aaKnown RBP6.57□□□□□ -1.36
SSR3-204ENST00000467733 ZBTB39O15060 712 aa6.57□□□□□ -1.36
SSR3-204ENST00000467733 CES1P23141 567 aa6.57□□□□□ -1.36
SSR3-204ENST00000467733 RBM6P78332 1123 aaKnown RBP6.57□□□□□ -1.36
SSR3-204ENST00000467733 SGO2Q562F6 1265 aa6.57□□□□□ -1.36
SSR3-204ENST00000467733 CAPN12Q6ZSI9 719 aa6.57□□□□□ -1.36
SSR3-204ENST00000467733 FBXL6Q8N531 539 aa6.57□□□□□ -1.36
SSR3-204ENST00000467733 SMG8Q8ND04 991 aaKnown RBP6.57□□□□□ -1.36
SSR3-204ENST00000467733 PMEPA1Q969W9 287 aa6.57□□□□□ -1.36
SSR3-204ENST00000467733 SUGCTQ9HAC7 445 aa6.57□□□□□ -1.36
SSR3-204ENST00000467733 DZANK1Q9NVP4 752 aa6.57□□□□□ -1.36
SSR3-204ENST00000467733 TMEM131LA2VDJ0 1609 aa6.57□□□□□ -1.36
SSR3-204ENST00000467733 LAMC1P11047 1609 aa6.57□□□□□ -1.36
SSR3-204ENST00000467733 KIF15Q9NS87 1388 aa6.57□□□□□ -1.36
SSR3-204ENST00000467733 NFKBIEO00221 500 aa6.56□□□□□ -1.36
SSR3-204ENST00000467733 EIF4EBP3O60516 100 aaPredicted RBP6.56□□□□□ -1.36
SSR3-204ENST00000467733 F13BP05160 661 aa6.56□□□□□ -1.36
SSR3-204ENST00000467733 IDI1Q13907 227 aa6.56□□□□□ -1.36
SSR3-204ENST00000467733 PAOXQ6QHF9 649 aa6.56□□□□□ -1.36
SSR3-204ENST00000467733 XKR5Q6UX68 686 aa6.56□□□□□ -1.36
SSR3-204ENST00000467733 TMEM102Q8N9M5 508 aaPredicted RBP6.56□□□□□ -1.36
SSR3-204ENST00000467733 CLP1Q92989 425 aaKnown RBP6.56□□□□□ -1.36
SSR3-204ENST00000467733 ASIC4Q96FT7 647 aa6.56□□□□□ -1.36
SSR3-204ENST00000467733 TMPRSS13Q9BYE2 586 aa6.56□□□□□ -1.36
SSR3-204ENST00000467733 CCDC39Q9UFE4 941 aa6.56□□□□□ -1.36
SSR3-204ENST00000467733 KANK1Q14678 1352 aa6.56□□□□□ -1.36
SSR3-204ENST00000467733 TRPM2O94759 1503 aa6.55□□□□□ -1.36
SSR3-204ENST00000467733 RPRD2Q5VT52 1461 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms