RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 SPTY2D1Q68D10 685 aaPredicted RBP18.22■□□□□ 0.51
ATPAF2-204ENST00000467560 ERICH6Q7L0X2 663 aa18.22■□□□□ 0.51
ATPAF2-204ENST00000467560 NSUN4Q96CB9 384 aaKnown RBP18.22■□□□□ 0.51
ATPAF2-204ENST00000467560 DBNDD2Q9BQY9 259 aa18.22■□□□□ 0.51
ATPAF2-204ENST00000467560 ARHGAP39Q9C0H5 1083 aa18.22■□□□□ 0.51
ATPAF2-204ENST00000467560 EFCC1Q9HA90 598 aa18.22■□□□□ 0.51
ATPAF2-204ENST00000467560 ZFYVE28Q9HCC9 887 aa18.22■□□□□ 0.51
ATPAF2-204ENST00000467560 SNRKQ9NRH2 765 aa18.22■□□□□ 0.51
ATPAF2-204ENST00000467560 KCNH4Q9UQ05 1017 aa18.22■□□□□ 0.51
ATPAF2-204ENST00000467560 ZBED9Q6R2W3 1325 aa18.22■□□□□ 0.51
ATPAF2-204ENST00000467560 TNNI3KQ59H18 835 aa18.21■□□□□ 0.51
ATPAF2-204ENST00000467560 NOL9Q5SY16 702 aaKnown RBP18.21■□□□□ 0.51
ATPAF2-204ENST00000467560 FTSJ3Q8IY81 847 aaKnown RBP18.21■□□□□ 0.51
ATPAF2-204ENST00000467560 FPGT-TNNI3KV9GXZ4 949 aa18.21■□□□□ 0.51
ATPAF2-204ENST00000467560 SURF6O75683 361 aaKnown RBP18.2■□□□□ 0.5
ATPAF2-204ENST00000467560 MAP3K10Q02779 954 aa18.2■□□□□ 0.5
ATPAF2-204ENST00000467560 PANK1Q8TE04 598 aa18.2■□□□□ 0.5
ATPAF2-204ENST00000467560 TLR7Q9NYK1 1049 aaKnown RBP18.2■□□□□ 0.5
ATPAF2-204ENST00000467560 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.2■□□□□ 0.5
ATPAF2-204ENST00000467560 MKI67P46013 3256 aaKnown RBP18.2■□□□□ 0.5
ATPAF2-204ENST00000467560 ZSWIM8A7E2V4 1837 aa18.19■□□□□ 0.5
ATPAF2-204ENST00000467560 TLR2O60603 784 aa18.19■□□□□ 0.5
ATPAF2-204ENST00000467560 ZSCAN29Q8IWY8 852 aaPredicted RBP18.19■□□□□ 0.5
ATPAF2-204ENST00000467560 GPR108Q9NPR9 543 aa18.19■□□□□ 0.5
ATPAF2-204ENST00000467560 RAI14Q9P0K7 980 aa18.19■□□□□ 0.5
ATPAF2-204ENST00000467560 NOP58Q9Y2X3 529 aaKnown RBP18.19■□□□□ 0.5
ATPAF2-204ENST00000467560 AK9Q5TCS8 1911 aa18.19■□□□□ 0.5
ATPAF2-204ENST00000467560 POTEFA5A3E0 1075 aa18.18■□□□□ 0.5
ATPAF2-204ENST00000467560 FAM196BA6NMK8 535 aa18.18■□□□□ 0.5
ATPAF2-204ENST00000467560 ECM2O94769 699 aaPredicted RBP18.18■□□□□ 0.5
ATPAF2-204ENST00000467560 CTGFP29279 349 aa18.18■□□□□ 0.5
ATPAF2-204ENST00000467560 CCDC84Q86UT8 332 aaPredicted RBP18.18■□□□□ 0.5
ATPAF2-204ENST00000467560 SLF2Q8IX21 1173 aa18.18■□□□□ 0.5
ATPAF2-204ENST00000467560 DBNLQ9UJU6 430 aaKnown RBP18.18■□□□□ 0.5
ATPAF2-204ENST00000467560 DOCK2Q92608 1830 aa18.18■□□□□ 0.5
ATPAF2-204ENST00000467560 PDHXO00330 501 aa18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 CYP2E1P05181 493 aaPredicted RBP18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 UQCRFS1P1P0C7P4 283 aa18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 PTPRAP18433 802 aa18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 OS9Q13438 667 aaPredicted RBP18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 GPAT2Q6NUI2 795 aa18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 CEP85Q6P2H3 762 aa18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 C17orf99Q6UX52 265 aa18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 ANKRD23Q86SG2 305 aa18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 ADGRA1Q86SQ6 560 aa18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 SCYL3Q8IZE3 742 aa18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 ZCCHC17Q9NP64 241 aaKnown RBP18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 CPA4Q9UI42 421 aa18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 PTCH2Q9Y6C5 1203 aa18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 ADGRA2Q96PE1 1338 aa18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 KIAA0100Q14667 2235 aaKnown RBP18.17■□□□□ 0.5
ATPAF2-204ENST00000467560 LACTBP83111 547 aaPredicted RBP18.16■□□□□ 0.5
ATPAF2-204ENST00000467560 TTC39AQ5SRH9 613 aa18.16■□□□□ 0.5
ATPAF2-204ENST00000467560 SH3RF3Q8TEJ3 882 aaPredicted RBP18.16■□□□□ 0.5
ATPAF2-204ENST00000467560 ARMC5Q96C12 935 aa18.16■□□□□ 0.5
ATPAF2-204ENST00000467560 EAF2Q96CJ1 260 aaPredicted RBP18.16■□□□□ 0.5
ATPAF2-204ENST00000467560 ZHX2Q9Y6X8 837 aa18.16■□□□□ 0.5
ATPAF2-204ENST00000467560 GSTO1P78417 241 aa18.15■□□□□ 0.5
ATPAF2-204ENST00000467560 RRP1BQ14684 758 aaKnown RBP18.15■□□□□ 0.5
ATPAF2-204ENST00000467560 CCDC8Q9H0W5 538 aaPredicted RBP18.15■□□□□ 0.5
ATPAF2-204ENST00000467560 PIH1D3Q9NQM4 214 aaKnown RBP18.15■□□□□ 0.5
ATPAF2-204ENST00000467560 LRP2BPQ9P2M1 347 aa18.15■□□□□ 0.5
ATPAF2-204ENST00000467560 AFG3L2Q9Y4W6 797 aa18.15■□□□□ 0.5
ATPAF2-204ENST00000467560 CXCL11O14625 94 aa18.14■□□□□ 0.49
ATPAF2-204ENST00000467560 NPM3O75607 178 aaKnown RBP18.14■□□□□ 0.49
ATPAF2-204ENST00000467560 LDHCP07864 332 aa18.14■□□□□ 0.49
ATPAF2-204ENST00000467560 CYP2C8P10632 490 aa18.14■□□□□ 0.49
ATPAF2-204ENST00000467560 ZAP70P43403 619 aa18.14■□□□□ 0.49
ATPAF2-204ENST00000467560 OSBPL5Q9H0X9 879 aaPredicted RBP18.14■□□□□ 0.49
ATPAF2-204ENST00000467560 NDUFB9Q9Y6M9 179 aa18.14■□□□□ 0.49
ATPAF2-204ENST00000467560 A0A0G2JLL6 359 aaPredicted RBP18.13■□□□□ 0.49
ATPAF2-204ENST00000467560 CTNND1O60716 968 aaKnown RBP18.13■□□□□ 0.49
ATPAF2-204ENST00000467560 CCDC158Q5M9N0 1113 aa18.13■□□□□ 0.49
ATPAF2-204ENST00000467560 PRRT2Q7Z6L0 340 aaPredicted RBP18.13■□□□□ 0.49
ATPAF2-204ENST00000467560 TEX11Q8IYF3 940 aa18.13■□□□□ 0.49
ATPAF2-204ENST00000467560 PICK1Q9NRD5 415 aa18.13■□□□□ 0.49
ATPAF2-204ENST00000467560 AATFQ9NY61 560 aaKnown RBP eCLIP18.13■□□□□ 0.49
ATPAF2-204ENST00000467560 EXOC6BQ9Y2D4 811 aa18.13■□□□□ 0.49
ATPAF2-204ENST00000467560 TBC1D12O60347 775 aa18.12■□□□□ 0.49
ATPAF2-204ENST00000467560 NAA16Q6N069 864 aaPredicted RBP18.12■□□□□ 0.49
ATPAF2-204ENST00000467560 ZNF333Q96JL9 665 aa18.12■□□□□ 0.49
ATPAF2-204ENST00000467560 ZNF512BQ96KM6 892 aaPredicted RBP18.12■□□□□ 0.49
ATPAF2-204ENST00000467560 TRIM47Q96LD4 638 aa18.12■□□□□ 0.49
ATPAF2-204ENST00000467560 TRIM75PA6NK02 468 aa18.11■□□□□ 0.49
ATPAF2-204ENST00000467560 EN2P19622 333 aaPredicted RBP18.11■□□□□ 0.49
ATPAF2-204ENST00000467560 SH3TC2Q8TF17 1288 aa18.11■□□□□ 0.49
ATPAF2-204ENST00000467560 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.11■□□□□ 0.49
ATPAF2-204ENST00000467560 PHIPQ8WWQ0 1821 aa18.11■□□□□ 0.49
ATPAF2-204ENST00000467560 MYO5AQ9Y4I1 1855 aaKnown RBP18.1■□□□□ 0.49
ATPAF2-204ENST00000467560 COL2A1P02458 1487 aaPredicted RBP18.1■□□□□ 0.49
ATPAF2-204ENST00000467560 MAP4K4O95819 1239 aaPredicted RBP18.1■□□□□ 0.49
ATPAF2-204ENST00000467560 MYCP01106 439 aaPredicted RBP18.1■□□□□ 0.49
ATPAF2-204ENST00000467560 PPP4CP60510 307 aa18.1■□□□□ 0.49
ATPAF2-204ENST00000467560 JAG1P78504 1218 aa18.1■□□□□ 0.49
ATPAF2-204ENST00000467560 MAPKAPK5Q8IW41 473 aa18.1■□□□□ 0.49
ATPAF2-204ENST00000467560 SIRT2Q8IXJ6 389 aa18.1■□□□□ 0.49
ATPAF2-204ENST00000467560 ANTXR1Q9H6X2 564 aa18.1■□□□□ 0.49
ATPAF2-204ENST00000467560 DOCK1Q14185 1865 aa18.09■□□□□ 0.49
ATPAF2-204ENST00000467560 BCRP11274 1271 aa18.09■□□□□ 0.49
ATPAF2-204ENST00000467560 PSMC4P43686 418 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms