RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 TM4SF1P30408 202 aa13.3□□□□□ -0.28
HPS1-208ENST00000467246 IARSP41252 1262 aaKnown RBP13.3□□□□□ -0.28
HPS1-208ENST00000467246 KRT40Q6A162 431 aa13.3□□□□□ -0.28
HPS1-208ENST00000467246 CPLX2Q6PUV4 134 aaKnown RBP13.3□□□□□ -0.28
HPS1-208ENST00000467246 SASS6Q6UVJ0 657 aa13.3□□□□□ -0.28
HPS1-208ENST00000467246 CCDC73Q6ZRK6 1079 aa13.3□□□□□ -0.28
HPS1-208ENST00000467246 BRAPQ7Z569 592 aa13.3□□□□□ -0.28
HPS1-208ENST00000467246 GJD4Q96KN9 370 aaPredicted RBP13.3□□□□□ -0.28
HPS1-208ENST00000467246 CBX8Q9HC52 389 aa13.3□□□□□ -0.28
HPS1-208ENST00000467246 CASZ1Q86V15 1759 aa13.3□□□□□ -0.28
HPS1-208ENST00000467246 SPATA31A6Q5VVP1 1343 aa13.3□□□□□ -0.28
HPS1-208ENST00000467246 A0A1B0GUL6 1792 aa13.3□□□□□ -0.28
HPS1-208ENST00000467246 CYP2D7A0A087X1C5 515 aa13.3□□□□□ -0.28
HPS1-208ENST00000467246 STK38Q15208 465 aa13.3□□□□□ -0.28
HPS1-208ENST00000467246 ZNF830Q96NB3 372 aaPredicted RBP13.3□□□□□ -0.28
HPS1-208ENST00000467246 EP400Q96L91 3159 aa13.3□□□□□ -0.28
HPS1-208ENST00000467246 FAM160A1Q05DH4 1040 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 TXNRD3Q86VQ6 643 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 DNAJC25Q9H1X3 360 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 POLR3EQ9NVU0 708 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.29□□□□□ -0.28
HPS1-208ENST00000467246 THSD7AQ9UPZ6 1657 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 A0A1B0GVL5 298 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 NPHP1O15259 732 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 HIBADHP31937 336 aaKnown RBP13.29□□□□□ -0.28
HPS1-208ENST00000467246 RFC4P35249 363 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 WTAPQ15007 396 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 SF3A1Q15459 793 aaKnown RBP13.29□□□□□ -0.28
HPS1-208ENST00000467246 ADALQ6DHV7 355 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 SYNE3Q6ZMZ3 975 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 FAM196AQ6ZSG2 479 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 SLC26A6Q9BXS9 759 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 JAG2Q9Y219 1238 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 TIAM2Q8IVF5 1701 aa13.29□□□□□ -0.28
HPS1-208ENST00000467246 CACNA1SQ13698 1873 aa13.28□□□□□ -0.28
HPS1-208ENST00000467246 ZNF500O60304 480 aaPredicted RBP13.28□□□□□ -0.28
HPS1-208ENST00000467246 TRAPPC3LQ5T215 181 aa13.28□□□□□ -0.28
HPS1-208ENST00000467246 CMTR1Q8N1G2 835 aaKnown RBP13.28□□□□□ -0.28
HPS1-208ENST00000467246 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
HPS1-208ENST00000467246 RNF41Q9H4P4 317 aaPredicted RBP13.28□□□□□ -0.28
HPS1-208ENST00000467246 PRDM10Q9NQV6 1147 aa13.28□□□□□ -0.28
HPS1-208ENST00000467246 R3HCC1Q9Y3T6 440 aaKnown RBP13.28□□□□□ -0.28
HPS1-208ENST00000467246 CHD4Q14839 1912 aa13.28□□□□□ -0.28
HPS1-208ENST00000467246 NHSQ6T4R5 1651 aa13.28□□□□□ -0.28
HPS1-208ENST00000467246 A0A087WWV3 80 aa13.28□□□□□ -0.28
HPS1-208ENST00000467246 SPTLC2O15270 562 aa13.28□□□□□ -0.28
HPS1-208ENST00000467246 KINO60870 393 aaKnown RBP13.28□□□□□ -0.28
HPS1-208ENST00000467246 YEATS4O95619 227 aa13.28□□□□□ -0.28
HPS1-208ENST00000467246 GUCY1A2P33402 732 aa13.28□□□□□ -0.28
HPS1-208ENST00000467246 MECOMQ03112 1051 aa13.28□□□□□ -0.28
HPS1-208ENST00000467246 CHAF1AQ13111 956 aaPredicted RBP13.28□□□□□ -0.28
HPS1-208ENST00000467246 SART3Q15020 963 aaKnown RBP13.28□□□□□ -0.28
HPS1-208ENST00000467246 MEX3CQ5U5Q3 659 aaKnown RBP13.28□□□□□ -0.28
HPS1-208ENST00000467246 ANO1Q5XXA6 986 aa13.28□□□□□ -0.28
HPS1-208ENST00000467246 MRPS27Q92552 414 aaKnown RBP13.28□□□□□ -0.28
HPS1-208ENST00000467246 ERCC4Q92889 916 aaPredicted RBP13.28□□□□□ -0.28
HPS1-208ENST00000467246 NSUN4Q96CB9 384 aaKnown RBP13.28□□□□□ -0.28
HPS1-208ENST00000467246 ANKRD2Q9GZV1 360 aa13.28□□□□□ -0.28
HPS1-208ENST00000467246 LRRC4BQ9NT99 713 aa13.28□□□□□ -0.28
HPS1-208ENST00000467246 ZNF165P49910 485 aa13.27□□□□□ -0.28
HPS1-208ENST00000467246 NDUFA8P51970 172 aa13.27□□□□□ -0.28
HPS1-208ENST00000467246 FMR1NBQ8N0W7 255 aaPredicted RBP13.27□□□□□ -0.28
HPS1-208ENST00000467246 KCNG4Q8TDN1 519 aa13.27□□□□□ -0.28
HPS1-208ENST00000467246 ERICH2A1L162 156 aa13.27□□□□□ -0.29
HPS1-208ENST00000467246 PRDX5P30044 214 aa13.27□□□□□ -0.29
HPS1-208ENST00000467246 EVX2Q03828 476 aa13.27□□□□□ -0.29
HPS1-208ENST00000467246 SSRP1Q08945 709 aaKnown RBP13.27□□□□□ -0.29
HPS1-208ENST00000467246 NFIXQ14938 502 aa13.27□□□□□ -0.29
HPS1-208ENST00000467246 TTC12Q9H892 705 aaPredicted RBP13.27□□□□□ -0.29
HPS1-208ENST00000467246 ANAPC4Q9UJX5 808 aa13.27□□□□□ -0.29
HPS1-208ENST00000467246 COL24A1Q17RW2 1714 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 A0A1W2PQ27 194 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 A0A1W2PQ64 194 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 A0A1W2PQD8 194 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 SEMA3EO15041 775 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 PRDM1O75626 825 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 FMNL1O95466 1100 aaPredicted RBP13.26□□□□□ -0.29
HPS1-208ENST00000467246 IFNAR1P17181 557 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 RTN1Q16799 776 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 NUP133Q8WUM0 1156 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 UBAC1Q9BSL1 405 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 CTAGE5O15320 804 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 MARCKSP29966 332 aaPredicted RBP13.26□□□□□ -0.29
HPS1-208ENST00000467246 AATFQ9NY61 560 aaKnown RBP eCLIP13.26□□□□□ -0.29
HPS1-208ENST00000467246 AFF2P51816 1311 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 GNL2Q13823 731 aaKnown RBP13.26□□□□□ -0.29
HPS1-208ENST00000467246 C11orf57Q6ZUT1 292 aaPredicted RBP13.26□□□□□ -0.29
HPS1-208ENST00000467246 SEPT12Q8IYM1 358 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 ZNF654Q8IZM8 581 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 SPC24Q8NBT2 197 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 RGS22Q8NE09 1264 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 ESR2Q92731 530 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 BRIP1Q9BX63 1249 aa13.26□□□□□ -0.29
HPS1-208ENST00000467246 TNKSO95271 1327 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 USP17L12C9JPN9 530 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 USP17L21D6R901 530 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 WDHD1O75717 1129 aaPredicted RBP13.25□□□□□ -0.29
HPS1-208ENST00000467246 TRIM29Q14134 588 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 SEC23AQ15436 765 aa13.25□□□□□ -0.29
HPS1-208ENST00000467246 AXDND1Q5T1B0 1012 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms