RNA–Protein interactions for RNA: ENST00000466588.5

GAPDH-207, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,363 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-207ENST00000466588 SMC5Q8IY18 1101 aa13.58□□□□□ -0.24
GAPDH-207ENST00000466588 ZNF341Q9BYN7 854 aa13.58□□□□□ -0.24
GAPDH-207ENST00000466588 EXOC6BQ9Y2D4 811 aa13.58□□□□□ -0.24
GAPDH-207ENST00000466588 CTGFP29279 349 aa13.57□□□□□ -0.24
GAPDH-207ENST00000466588 INPP5BP32019 993 aa13.57□□□□□ -0.24
GAPDH-207ENST00000466588 PUM3Q15397 648 aaKnown RBP13.57□□□□□ -0.24
GAPDH-207ENST00000466588 ANKRD23Q86SG2 305 aa13.57□□□□□ -0.24
GAPDH-207ENST00000466588 ERC1Q8IUD2 1116 aa13.57□□□□□ -0.24
GAPDH-207ENST00000466588 KLHDC4Q8TBB5 520 aa13.57□□□□□ -0.24
GAPDH-207ENST00000466588 SHISA4Q96DD7 197 aa13.57□□□□□ -0.24
GAPDH-207ENST00000466588 BCL11AQ9H165 835 aa13.57□□□□□ -0.24
GAPDH-207ENST00000466588 KCNH4Q9UQ05 1017 aa13.57□□□□□ -0.24
GAPDH-207ENST00000466588 H0YGN5 161 aa13.56□□□□□ -0.24
GAPDH-207ENST00000466588 IFIT1P09914 478 aaKnown RBP13.56□□□□□ -0.24
GAPDH-207ENST00000466588 MIGA2Q7L4E1 593 aa13.56□□□□□ -0.24
GAPDH-207ENST00000466588 FAM151AQ8WW52 585 aa13.56□□□□□ -0.24
GAPDH-207ENST00000466588 TRIM47Q96LD4 638 aa13.56□□□□□ -0.24
GAPDH-207ENST00000466588 SIL1Q9H173 461 aa13.56□□□□□ -0.24
GAPDH-207ENST00000466588 SRRDQ9UH36 339 aa13.56□□□□□ -0.24
GAPDH-207ENST00000466588 ZNF112Q9UJU3 913 aa13.56□□□□□ -0.24
GAPDH-207ENST00000466588 MOGSQ13724 837 aa13.55□□□□□ -0.24
GAPDH-207ENST00000466588 MTFR1Q15390 333 aa13.55□□□□□ -0.24
GAPDH-207ENST00000466588 LRRCC1Q9C099 1032 aa13.55□□□□□ -0.24
GAPDH-207ENST00000466588 CPA4Q9UI42 421 aa13.55□□□□□ -0.24
GAPDH-207ENST00000466588 PA2G4Q9UQ80 394 aaKnown RBP13.55□□□□□ -0.24
GAPDH-207ENST00000466588 DAGLAQ9Y4D2 1042 aa13.55□□□□□ -0.24
GAPDH-207ENST00000466588 PDHXO00330 501 aa13.54□□□□□ -0.24
GAPDH-207ENST00000466588 OSBPP22059 807 aa13.54□□□□□ -0.24
GAPDH-207ENST00000466588 PSMC4P43686 418 aa13.54□□□□□ -0.24
GAPDH-207ENST00000466588 NUCB1Q02818 461 aa13.54□□□□□ -0.24
GAPDH-207ENST00000466588 NOL9Q5SY16 702 aaKnown RBP13.54□□□□□ -0.24
GAPDH-207ENST00000466588 CHD1LQ86WJ1 897 aa13.54□□□□□ -0.24
GAPDH-207ENST00000466588 WDR66Q8TBY9 1149 aa13.54□□□□□ -0.24
GAPDH-207ENST00000466588 KIF1BPQ96EK5 621 aa13.54□□□□□ -0.24
GAPDH-207ENST00000466588 COPRSQ9NQ92 184 aa13.54□□□□□ -0.24
GAPDH-207ENST00000466588 NOP58Q9Y2X3 529 aaKnown RBP13.54□□□□□ -0.24
GAPDH-207ENST00000466588 EYA2O00167 538 aa13.53□□□□□ -0.24
GAPDH-207ENST00000466588 ECM2O94769 699 aaPredicted RBP13.53□□□□□ -0.24
GAPDH-207ENST00000466588 SLC5A1P13866 664 aa13.53□□□□□ -0.24
GAPDH-207ENST00000466588 RFX5P48382 616 aaPredicted RBP13.53□□□□□ -0.24
GAPDH-207ENST00000466588 NFIAQ12857 509 aa13.53□□□□□ -0.24
GAPDH-207ENST00000466588 DIXDC1Q155Q3 683 aa13.53□□□□□ -0.24
GAPDH-207ENST00000466588 CDC42EP5Q6NZY7 148 aa13.53□□□□□ -0.24
GAPDH-207ENST00000466588 UBE2Q1Q7Z7E8 422 aa13.53□□□□□ -0.24
GAPDH-207ENST00000466588 LPIN2Q92539 896 aa13.53□□□□□ -0.24
GAPDH-207ENST00000466588 FBXO3Q9UK99 471 aa13.53□□□□□ -0.24
GAPDH-207ENST00000466588 MYPNQ86TC9 1320 aa13.53□□□□□ -0.24
GAPDH-207ENST00000466588 ATRNL1Q5VV63 1379 aa13.53□□□□□ -0.24
GAPDH-207ENST00000466588 HOXD10P28358 340 aa13.52□□□□□ -0.25
GAPDH-207ENST00000466588 GRK4P32298 578 aa13.52□□□□□ -0.25
GAPDH-207ENST00000466588 IL15P40933 162 aaPredicted RBP13.52□□□□□ -0.25
GAPDH-207ENST00000466588 RGS3P49796 1198 aa13.52□□□□□ -0.25
GAPDH-207ENST00000466588 RHPN1Q8TCX5 695 aa13.52□□□□□ -0.25
GAPDH-207ENST00000466588 PARK7Q99497 189 aaKnown RBP13.52□□□□□ -0.25
GAPDH-207ENST00000466588 LNPKQ9C0E8 428 aa13.52□□□□□ -0.25
GAPDH-207ENST00000466588 FAM198AQ9UFP1 575 aa13.52□□□□□ -0.25
GAPDH-207ENST00000466588 CEP290O15078 2479 aa13.52□□□□□ -0.25
GAPDH-207ENST00000466588 FMNL1O95466 1100 aaPredicted RBP13.51□□□□□ -0.25
GAPDH-207ENST00000466588 BCRP11274 1271 aa13.51□□□□□ -0.25
GAPDH-207ENST00000466588 PRDX5P30044 214 aa13.51□□□□□ -0.25
GAPDH-207ENST00000466588 GJA8P48165 433 aa13.51□□□□□ -0.25
GAPDH-207ENST00000466588 TCP10Q12799 353 aa13.51□□□□□ -0.25
GAPDH-207ENST00000466588 GPAT2Q6NUI2 795 aa13.51□□□□□ -0.25
GAPDH-207ENST00000466588 CHRDL2Q6WN34 429 aa13.51□□□□□ -0.25
GAPDH-207ENST00000466588 ATG9AQ7Z3C6 839 aa13.51□□□□□ -0.25
GAPDH-207ENST00000466588 CLASRPQ8N2M8 674 aaKnown RBP13.51□□□□□ -0.25
GAPDH-207ENST00000466588 NKX2-3Q8TAU0 364 aa13.51□□□□□ -0.25
GAPDH-207ENST00000466588 RAET1EQ8TD07 263 aa13.51□□□□□ -0.25
GAPDH-207ENST00000466588 RFX7Q2KHR2 1363 aa13.51□□□□□ -0.25
GAPDH-207ENST00000466588 CXCL11O14625 94 aa13.5□□□□□ -0.25
GAPDH-207ENST00000466588 CIAO1O76071 339 aa13.5□□□□□ -0.25
GAPDH-207ENST00000466588 GJB1P08034 283 aa13.5□□□□□ -0.25
GAPDH-207ENST00000466588 CCL5P13501 91 aa13.5□□□□□ -0.25
GAPDH-207ENST00000466588 PRKCZQ05513 592 aa13.5□□□□□ -0.25
GAPDH-207ENST00000466588 SALL1Q9NSC2 1324 aa13.5□□□□□ -0.25
GAPDH-207ENST00000466588 MYH13Q9UKX3 1938 aa13.49□□□□□ -0.25
GAPDH-207ENST00000466588 SMARCA5O60264 1052 aaPredicted RBP13.49□□□□□ -0.25
GAPDH-207ENST00000466588 CYP2C8P10632 490 aa13.49□□□□□ -0.25
GAPDH-207ENST00000466588 IL1RAPL2Q9NP60 686 aa13.49□□□□□ -0.25
GAPDH-207ENST00000466588 USP40Q9NVE5 1235 aa13.49□□□□□ -0.25
GAPDH-207ENST00000466588 CEP126Q9P2H0 1117 aa13.49□□□□□ -0.25
GAPDH-207ENST00000466588 TRIOBPQ9H2D6 2365 aa13.49□□□□□ -0.25
GAPDH-207ENST00000466588 A0A0G2JLL6 359 aaPredicted RBP13.48□□□□□ -0.25
GAPDH-207ENST00000466588 PHF20L1A8MW92 1017 aa13.48□□□□□ -0.25
GAPDH-207ENST00000466588 ZBTB22O15209 634 aa13.48□□□□□ -0.25
GAPDH-207ENST00000466588 LDHBP07195 334 aaKnown RBP13.48□□□□□ -0.25
GAPDH-207ENST00000466588 IFIT2P09913 472 aaKnown RBP13.48□□□□□ -0.25
GAPDH-207ENST00000466588 FCGRTP55899 365 aa13.48□□□□□ -0.25
GAPDH-207ENST00000466588 ATP2B3Q16720 1220 aa13.48□□□□□ -0.25
GAPDH-207ENST00000466588 PRRT2Q7Z6L0 340 aaPredicted RBP13.48□□□□□ -0.25
GAPDH-207ENST00000466588 ZFPM1Q8IX07 1006 aa13.48□□□□□ -0.25
GAPDH-207ENST00000466588 SCYL3Q8IZE3 742 aa13.48□□□□□ -0.25
GAPDH-207ENST00000466588 SLAIN1Q8ND83 568 aa13.48□□□□□ -0.25
GAPDH-207ENST00000466588 DPF3Q92784 378 aa13.48□□□□□ -0.25
GAPDH-207ENST00000466588 GPATCH3Q96I76 525 aa13.48□□□□□ -0.25
GAPDH-207ENST00000466588 PRO3102Q9H379 93 aa13.48□□□□□ -0.25
GAPDH-207ENST00000466588 RBM27Q9P2N5 1060 aaKnown RBP13.48□□□□□ -0.25
GAPDH-207ENST00000466588 AKAP2Q9Y2D5 859 aa13.48□□□□□ -0.25
GAPDH-207ENST00000466588 DOCK2Q92608 1830 aa13.48□□□□□ -0.25
GAPDH-207ENST00000466588 LAMA3Q16787 3333 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms