RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 DZIP1Q86YF9 867 aaKnown RBP21.36■■□□□ 1.01
CYTH3-205ENST00000466543 FAM163AQ96GL9 167 aaPredicted RBP21.36■■□□□ 1.01
CYTH3-205ENST00000466543 TMEM106CQ9BVX2 250 aa21.36■■□□□ 1.01
CYTH3-205ENST00000466543 DOCK1Q14185 1865 aa21.36■■□□□ 1.01
CYTH3-205ENST00000466543 MROH7-TTC4A0A0A0MT08 1334 aa21.35■■□□□ 1.01
CYTH3-205ENST00000466543 PNMA6EA0A0J9YXQ4 647 aa21.35■■□□□ 1.01
CYTH3-205ENST00000466543 CYP2C8P10632 490 aa21.35■■□□□ 1.01
CYTH3-205ENST00000466543 BTDP43251 543 aa21.35■■□□□ 1.01
CYTH3-205ENST00000466543 RHBDL3P58872 404 aa21.35■■□□□ 1.01
CYTH3-205ENST00000466543 MAP3K10Q02779 954 aa21.35■■□□□ 1.01
CYTH3-205ENST00000466543 MECOMQ03112 1051 aa21.35■■□□□ 1.01
CYTH3-205ENST00000466543 KIF22Q14807 665 aa21.35■■□□□ 1.01
CYTH3-205ENST00000466543 NBPF11Q86T75 865 aa21.35■■□□□ 1.01
CYTH3-205ENST00000466543 ZGPATQ8N5A5 531 aaKnown RBP21.35■■□□□ 1.01
CYTH3-205ENST00000466543 HMG20BQ9P0W2 317 aa21.35■■□□□ 1.01
CYTH3-205ENST00000466543 MGAMO43451 1857 aa21.35■■□□□ 1.01
CYTH3-205ENST00000466543 PSMC4P43686 418 aa21.34■■□□□ 1.01
CYTH3-205ENST00000466543 PICALMQ13492 652 aa21.34■■□□□ 1.01
CYTH3-205ENST00000466543 TBC1D9Q6ZT07 1266 aa21.34■■□□□ 1.01
CYTH3-205ENST00000466543 CCDC84Q86UT8 332 aaPredicted RBP21.34■■□□□ 1.01
CYTH3-205ENST00000466543 SCYL3Q8IZE3 742 aa21.34■■□□□ 1.01
CYTH3-205ENST00000466543 ZHX2Q9Y6X8 837 aa21.34■■□□□ 1.01
CYTH3-205ENST00000466543 CXCL11O14625 94 aa21.33■■□□□ 1.01
CYTH3-205ENST00000466543 BCRP11274 1271 aa21.33■■□□□ 1.01
CYTH3-205ENST00000466543 PTPRAP18433 802 aa21.33■■□□□ 1.01
CYTH3-205ENST00000466543 OSBPP22059 807 aa21.33■■□□□ 1.01
CYTH3-205ENST00000466543 MVPQ14764 893 aaKnown RBP21.33■■□□□ 1.01
CYTH3-205ENST00000466543 MTFR1Q15390 333 aa21.33■■□□□ 1.01
CYTH3-205ENST00000466543 SLC4A8Q2Y0W8 1093 aa21.33■■□□□ 1.01
CYTH3-205ENST00000466543 ZSCAN29Q8IWY8 852 aaPredicted RBP21.33■■□□□ 1.01
CYTH3-205ENST00000466543 CLUAP1Q96AJ1 413 aa21.33■■□□□ 1.01
CYTH3-205ENST00000466543 NEUROD6Q96NK8 337 aa21.33■■□□□ 1.01
CYTH3-205ENST00000466543 SRRDQ9UH36 339 aa21.33■■□□□ 1.01
CYTH3-205ENST00000466543 AKAP2Q9Y2D5 859 aa21.33■■□□□ 1.01
CYTH3-205ENST00000466543 GPR75-ASB3A0A0A6YYF3 556 aa21.32■■□□□ 1
CYTH3-205ENST00000466543 A0A0G2JLL6 359 aaPredicted RBP21.32■■□□□ 1
CYTH3-205ENST00000466543 FAM196BA6NMK8 535 aa21.32■■□□□ 1
CYTH3-205ENST00000466543 GNRH1P01148 92 aa21.32■■□□□ 1
CYTH3-205ENST00000466543 ATF7IPQ6VMQ6 1270 aa21.32■■□□□ 1
CYTH3-205ENST00000466543 PRRT2Q7Z6L0 340 aaPredicted RBP21.32■■□□□ 1
CYTH3-205ENST00000466543 AFG3L2Q9Y4W6 797 aa21.32■■□□□ 1
CYTH3-205ENST00000466543 ERICH6Q7L0X2 663 aa21.31■■□□□ 1
CYTH3-205ENST00000466543 FRAT1Q92837 279 aaPredicted RBP21.31■■□□□ 1
CYTH3-205ENST00000466543 SHISA4Q96DD7 197 aa21.31■■□□□ 1
CYTH3-205ENST00000466543 GNAI2P04899 355 aa21.3■■□□□ 1
CYTH3-205ENST00000466543 PRMT2P55345 433 aa21.3■■□□□ 1
CYTH3-205ENST00000466543 SPTY2D1Q68D10 685 aaPredicted RBP21.3■■□□□ 1
CYTH3-205ENST00000466543 SPATA5Q8NB90 893 aa21.3■■□□□ 1
CYTH3-205ENST00000466543 NSUN4Q96CB9 384 aaKnown RBP21.3■■□□□ 1
CYTH3-205ENST00000466543 PICK1Q9NRD5 415 aa21.3■■□□□ 1
CYTH3-205ENST00000466543 CEP290O15078 2479 aa21.29■■□□□ 1
CYTH3-205ENST00000466543 FMNL1O95466 1100 aaPredicted RBP21.29■■□□□ 1
CYTH3-205ENST00000466543 ARID4AP29374 1257 aaPredicted RBP21.29■■□□□ 1
CYTH3-205ENST00000466543 MCAMP43121 646 aa21.29■■□□□ 1
CYTH3-205ENST00000466543 HABP4Q5JVS0 413 aaKnown RBP21.29■■□□□ 1
CYTH3-205ENST00000466543 SLF2Q8IX21 1173 aa21.29■■□□□ 1
CYTH3-205ENST00000466543 PARK7Q99497 189 aaKnown RBP21.29■■□□□ 1
CYTH3-205ENST00000466543 MYPNQ86TC9 1320 aa21.29■■□□□ 1
CYTH3-205ENST00000466543 MYO5AQ9Y4I1 1855 aaKnown RBP21.28■■□□□ 1
CYTH3-205ENST00000466543 SIPA1L1O43166 1804 aa21.28■■□□□ 1
CYTH3-205ENST00000466543 ATAD5Q96QE3 1844 aa21.28■■□□□ 1
CYTH3-205ENST00000466543 PRKCZQ05513 592 aa21.28■■□□□ 1
CYTH3-205ENST00000466543 RRP1BQ14684 758 aaKnown RBP21.28■■□□□ 1
CYTH3-205ENST00000466543 GADL1Q6ZQY3 521 aa21.28■■□□□ 1
CYTH3-205ENST00000466543 TMEM57Q8N5G2 664 aa21.28■■□□□ 1
CYTH3-205ENST00000466543 PCDH10Q9P2E7 1040 aa21.28■■□□□ 1
CYTH3-205ENST00000466543 GABRQQ9UN88 632 aa21.28■■□□□ 1
CYTH3-205ENST00000466543 TRIM75PA6NK02 468 aa21.27■■□□□ 1
CYTH3-205ENST00000466543 IPO8O15397 1037 aaKnown RBP21.27■■□□□ 1
CYTH3-205ENST00000466543 CTNND1O60716 968 aaKnown RBP21.27■■□□□ 1
CYTH3-205ENST00000466543 NPM3O75607 178 aaKnown RBP21.26■□□□□ 0.99
CYTH3-205ENST00000466543 GRK4P32298 578 aa21.26■□□□□ 0.99
CYTH3-205ENST00000466543 GORABQ5T7V8 394 aa21.26■□□□□ 0.99
CYTH3-205ENST00000466543 FASTKD5Q7L8L6 764 aaKnown RBP21.26■□□□□ 0.99
CYTH3-205ENST00000466543 RAET1EQ8TD07 263 aa21.26■□□□□ 0.99
CYTH3-205ENST00000466543 GCC1Q96CN9 775 aa21.26■□□□□ 0.99
CYTH3-205ENST00000466543 CDK5RAP2Q96SN8 1893 aa21.26■□□□□ 0.99
CYTH3-205ENST00000466543 DOCK3Q8IZD9 2030 aa21.26■□□□□ 0.99
CYTH3-205ENST00000466543 TBC1D12O60347 775 aa21.25■□□□□ 0.99
CYTH3-205ENST00000466543 G3BP1Q13283 466 aaKnown RBP eCLIP21.25■□□□□ 0.99
CYTH3-205ENST00000466543 TREML2Q5T2D2 321 aa21.25■□□□□ 0.99
CYTH3-205ENST00000466543 SNRKQ9NRH2 765 aa21.25■□□□□ 0.99
CYTH3-205ENST00000466543 RAI14Q9P0K7 980 aa21.25■□□□□ 0.99
CYTH3-205ENST00000466543 LOC285556D6RIA3 1793 aa21.25■□□□□ 0.99
CYTH3-205ENST00000466543 MAST2Q6P0Q8 1798 aa21.24■□□□□ 0.99
CYTH3-205ENST00000466543 HOXD10P28358 340 aa21.24■□□□□ 0.99
CYTH3-205ENST00000466543 POLA2Q14181 598 aa21.24■□□□□ 0.99
CYTH3-205ENST00000466543 OSBPL5Q9H0X9 879 aaPredicted RBP21.24■□□□□ 0.99
CYTH3-205ENST00000466543 SLC45A1Q9Y2W3 748 aa21.24■□□□□ 0.99
CYTH3-205ENST00000466543 COL2A1P02458 1487 aaPredicted RBP21.24■□□□□ 0.99
CYTH3-205ENST00000466543 CCL5P13501 91 aa21.23■□□□□ 0.99
CYTH3-205ENST00000466543 FCGRTP55899 365 aa21.23■□□□□ 0.99
CYTH3-205ENST00000466543 SH3RF3Q8TEJ3 882 aaPredicted RBP21.23■□□□□ 0.99
CYTH3-205ENST00000466543 DBNDD2Q9BQY9 259 aa21.23■□□□□ 0.99
CYTH3-205ENST00000466543 C1orf115Q9H7X2 142 aa21.23■□□□□ 0.99
CYTH3-205ENST00000466543 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.23■□□□□ 0.99
CYTH3-205ENST00000466543 RANBP2P49792 3224 aaKnown RBP21.22■□□□□ 0.99
CYTH3-205ENST00000466543 LDHCP07864 332 aa21.22■□□□□ 0.99
CYTH3-205ENST00000466543 GSTO1P78417 241 aa21.22■□□□□ 0.99
CYTH3-205ENST00000466543 TNNI3KQ59H18 835 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms