RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 SLIT2O94813 1529 aa22.37■■□□□ 1.17
LIMS2-212ENST00000466410 TRIM29Q14134 588 aa22.37■■□□□ 1.17
LIMS2-212ENST00000466410 BCL11BQ9C0K0 894 aaPredicted RBP22.37■■□□□ 1.17
LIMS2-212ENST00000466410 SLC12A7Q9Y666 1083 aa22.37■■□□□ 1.17
LIMS2-212ENST00000466410 LIFRP42702 1097 aa22.37■■□□□ 1.17
LIMS2-212ENST00000466410 TPM4P67936 248 aa22.37■■□□□ 1.17
LIMS2-212ENST00000466410 MAP3K12Q12852 859 aa22.37■■□□□ 1.17
LIMS2-212ENST00000466410 PNOCQ13519 176 aa22.37■■□□□ 1.17
LIMS2-212ENST00000466410 SYCP1Q15431 976 aa22.37■■□□□ 1.17
LIMS2-212ENST00000466410 HSD3B7Q9H2F3 369 aa22.37■■□□□ 1.17
LIMS2-212ENST00000466410 PRDM10Q9NQV6 1147 aa22.37■■□□□ 1.17
LIMS2-212ENST00000466410 PRKAB2O43741 272 aa22.36■■□□□ 1.17
LIMS2-212ENST00000466410 ATP1A3P13637 1013 aa22.36■■□□□ 1.17
LIMS2-212ENST00000466410 SLC5A1P13866 664 aa22.36■■□□□ 1.17
LIMS2-212ENST00000466410 IL6STP40189 918 aaPredicted RBP22.36■■□□□ 1.17
LIMS2-212ENST00000466410 GSG1L2A8MUP6 293 aa22.36■■□□□ 1.17
LIMS2-212ENST00000466410 RESP18Q5W5W9 173 aa22.36■■□□□ 1.17
LIMS2-212ENST00000466410 SMAP1Q8IYB5 467 aaPredicted RBP22.36■■□□□ 1.17
LIMS2-212ENST00000466410 SEC31BQ9NQW1 1179 aa22.36■■□□□ 1.17
LIMS2-212ENST00000466410 KCND1Q9NSA2 647 aa22.36■■□□□ 1.17
LIMS2-212ENST00000466410 IKBKBO14920 756 aa22.35■■□□□ 1.17
LIMS2-212ENST00000466410 LRP5O75197 1615 aa22.35■■□□□ 1.17
LIMS2-212ENST00000466410 DISP2A7MBM2 1401 aa22.35■■□□□ 1.17
LIMS2-212ENST00000466410 FAM237AA0A1B0GTK4 181 aa22.35■■□□□ 1.17
LIMS2-212ENST00000466410 SPDYE4A6NLX3 237 aa22.35■■□□□ 1.17
LIMS2-212ENST00000466410 GUCY1A2P33402 732 aa22.35■■□□□ 1.17
LIMS2-212ENST00000466410 FANCCQ00597 558 aa22.35■■□□□ 1.17
LIMS2-212ENST00000466410 SSRP1Q08945 709 aaKnown RBP22.35■■□□□ 1.17
LIMS2-212ENST00000466410 AKNAD1Q5T1N1 836 aa22.35■■□□□ 1.17
LIMS2-212ENST00000466410 SUSD4Q5VX71 490 aa22.35■■□□□ 1.17
LIMS2-212ENST00000466410 E4F1Q66K89 784 aaPredicted RBP22.35■■□□□ 1.17
LIMS2-212ENST00000466410 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.35■■□□□ 1.17
LIMS2-212ENST00000466410 CHD4Q14839 1912 aa22.34■■□□□ 1.17
LIMS2-212ENST00000466410 CCDC150Q8NCX0 1101 aa22.34■■□□□ 1.17
LIMS2-212ENST00000466410 LONRF3Q496Y0 759 aa22.34■■□□□ 1.17
LIMS2-212ENST00000466410 RRP12Q5JTH9 1297 aaKnown RBP22.34■■□□□ 1.17
LIMS2-212ENST00000466410 ZKSCAN3Q9BRR0 538 aa22.34■■□□□ 1.17
LIMS2-212ENST00000466410 ARAP2Q8WZ64 1704 aa22.33■■□□□ 1.17
LIMS2-212ENST00000466410 FMNL1O95466 1100 aaPredicted RBP22.33■■□□□ 1.17
LIMS2-212ENST00000466410 SFPQP23246 707 aaKnown RBP eCLIP22.33■■□□□ 1.17
LIMS2-212ENST00000466410 METTL16Q86W50 562 aaKnown RBP22.33■■□□□ 1.17
LIMS2-212ENST00000466410 LCORLQ8N3X6 602 aa22.33■■□□□ 1.17
LIMS2-212ENST00000466410 MPHOSPH8Q99549 860 aa22.33■■□□□ 1.17
LIMS2-212ENST00000466410 STK36Q9NRP7 1315 aa22.33■■□□□ 1.16
LIMS2-212ENST00000466410 CUTAO60888 179 aa22.33■■□□□ 1.16
LIMS2-212ENST00000466410 MFSD6Q6ZSS7 791 aa22.33■■□□□ 1.16
LIMS2-212ENST00000466410 FOXP4Q8IVH2 680 aaPredicted RBP22.33■■□□□ 1.16
LIMS2-212ENST00000466410 STK11IPQ8N1F8 1099 aa22.33■■□□□ 1.16
LIMS2-212ENST00000466410 CNNM2Q9H8M5 875 aa22.33■■□□□ 1.16
LIMS2-212ENST00000466410 DOCK2Q92608 1830 aa22.32■■□□□ 1.16
LIMS2-212ENST00000466410 BTBD18B2RXH4 712 aa22.32■■□□□ 1.16
LIMS2-212ENST00000466410 IFNAR1P17181 557 aa22.32■■□□□ 1.16
LIMS2-212ENST00000466410 BCAMP50895 628 aa22.32■■□□□ 1.16
LIMS2-212ENST00000466410 TOMM22Q9NS69 142 aa22.32■■□□□ 1.16
LIMS2-212ENST00000466410 SPECC1Q5M775 1068 aa22.32■■□□□ 1.16
LIMS2-212ENST00000466410 NOSTRINQ8IVI9 506 aa22.32■■□□□ 1.16
LIMS2-212ENST00000466410 KRT23Q9C075 422 aa22.32■■□□□ 1.16
LIMS2-212ENST00000466410 ZNF215Q9UL58 517 aaPredicted RBP22.32■■□□□ 1.16
LIMS2-212ENST00000466410 KCNH3Q9ULD8 1083 aa22.32■■□□□ 1.16
LIMS2-212ENST00000466410 KCNJ14Q9UNX9 436 aa22.32■■□□□ 1.16
LIMS2-212ENST00000466410 COL16A1Q07092 1604 aaPredicted RBP22.32■■□□□ 1.16
LIMS2-212ENST00000466410 TDO2P48775 406 aa22.31■■□□□ 1.16
LIMS2-212ENST00000466410 CCDC82Q8N4S0 544 aa22.31■■□□□ 1.16
LIMS2-212ENST00000466410 DPF2Q92785 391 aa22.31■■□□□ 1.16
LIMS2-212ENST00000466410 EXOC5O00471 708 aa22.31■■□□□ 1.16
LIMS2-212ENST00000466410 TOB1P50616 345 aaPredicted RBP22.31■■□□□ 1.16
LIMS2-212ENST00000466410 MYL5Q02045 173 aa22.31■■□□□ 1.16
LIMS2-212ENST00000466410 KRBA2Q6ZNG9 492 aa22.31■■□□□ 1.16
LIMS2-212ENST00000466410 KIF18AQ8NI77 898 aa22.31■■□□□ 1.16
LIMS2-212ENST00000466410 AK7Q96M32 723 aa22.31■■□□□ 1.16
LIMS2-212ENST00000466410 SLC4A4Q9Y6R1 1079 aa22.31■■□□□ 1.16
LIMS2-212ENST00000466410 CNNM3Q8NE01 707 aa22.3■■□□□ 1.16
LIMS2-212ENST00000466410 PPP1R13BQ96KQ4 1090 aa22.3■■□□□ 1.16
LIMS2-212ENST00000466410 PCDHA5Q9Y5H7 936 aa22.3■■□□□ 1.16
LIMS2-212ENST00000466410 COL14A1Q05707 1796 aaKnown RBP22.3■■□□□ 1.16
LIMS2-212ENST00000466410 FOXN1O15353 648 aa22.3■■□□□ 1.16
LIMS2-212ENST00000466410 MMP1P03956 469 aa22.3■■□□□ 1.16
LIMS2-212ENST00000466410 EIF5P55010 431 aaKnown RBP22.3■■□□□ 1.16
LIMS2-212ENST00000466410 DIS3L2Q8IYB7 885 aaKnown RBP22.3■■□□□ 1.16
LIMS2-212ENST00000466410 CMTR1Q8N1G2 835 aaKnown RBP22.3■■□□□ 1.16
LIMS2-212ENST00000466410 MIGA1Q8NAN2 632 aa22.3■■□□□ 1.16
LIMS2-212ENST00000466410 STAG1Q8WVM7 1258 aa22.3■■□□□ 1.16
LIMS2-212ENST00000466410 RTN1Q16799 776 aa22.29■■□□□ 1.16
LIMS2-212ENST00000466410 KRI1Q8N9T8 703 aaKnown RBP22.29■■□□□ 1.16
LIMS2-212ENST00000466410 UBASH3AP57075 661 aa22.29■■□□□ 1.16
LIMS2-212ENST00000466410 GRIN1Q05586 938 aa22.29■■□□□ 1.16
LIMS2-212ENST00000466410 WASF1Q92558 559 aa22.29■■□□□ 1.16
LIMS2-212ENST00000466410 TIAM2Q8IVF5 1701 aa22.28■■□□□ 1.16
LIMS2-212ENST00000466410 WTAPQ15007 396 aa22.28■■□□□ 1.16
LIMS2-212ENST00000466410 UTP14AQ9BVJ6 771 aaKnown RBP22.28■■□□□ 1.16
LIMS2-212ENST00000466410 NACAP1Q9BZK3 213 aa22.28■■□□□ 1.16
LIMS2-212ENST00000466410 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.28■■□□□ 1.16
LIMS2-212ENST00000466410 V9GYY5 206 aaPredicted RBP22.28■■□□□ 1.16
LIMS2-212ENST00000466410 SERPINC1P01008 464 aa22.28■■□□□ 1.16
LIMS2-212ENST00000466410 BMP6P22004 513 aa22.28■■□□□ 1.16
LIMS2-212ENST00000466410 INTS5Q6P9B9 1019 aaKnown RBP22.28■■□□□ 1.16
LIMS2-212ENST00000466410 PNPLA7Q6ZV29 1317 aa22.27■■□□□ 1.16
LIMS2-212ENST00000466410 NID2Q14112 1375 aa22.27■■□□□ 1.16
LIMS2-212ENST00000466410 PDE4BQ07343 736 aa22.27■■□□□ 1.16
LIMS2-212ENST00000466410 SAFBQ15424 915 aaKnown RBP eCLIP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms